Slae012779.1
Basic Information
- Insect
- Synergus laeviventris
- Gene Symbol
- lilli
- Assembly
- GCA_032275145.1
- Location
- JAUESI010000033.1:9663702-9675276[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00014 4.1 7.3 3.8 44 146 43 140 40 209 0.51 2 2 5.7e-08 0.0017 18.4 0.8 323 381 202 262 178 272 0.79
Sequence Information
- Coding Sequence
- ATGGGAATCTTTCGAGGCAAAGCGAAGAAGATGAAGggattctttctttctttatttcaccGCGAGTCTGGCAAAGATCAAGCGCTTTTACTTTTTGCGAGGTTTGCAGTGAATCCGGATACTCACGATCGAGCCACTCGACAGATTCAGTCAAAATTGGGTAGCTACTCGGCGCTAAGGCCGATGGTGATGGATGATCCGAAAAGACTGATCGGAATCGATGTATTGGCAGCAAGTACGAGTTCGGGCTCGACGCACCCATCGGCGCCGAGGCTTCCAAGCGGCTCCGGATCCAGTACGAGGAGTTCGCCTTCGTCACAGGAGTTCAAGAAACCCGGGGGGCCCAGGTCGAGTTCCAACTCGTCGAATTTCAACTCCTCAAGTCACGCCTCGGCGCAGCGCGGCGGGTTCGTCAAACCCGCTGATGGGAAACCACCTTATGGGGGAAGAGGCGGCTATCCTGGTCAACCAGTCAAGCACGGAGGTAATAGCAATGACCATCGAAGTCATGGCTTACTTCCGGCAAAAGGTCCTCCGCCACCAAACTCGGTCGGAAGCAGCTCAGCCATCAGCAGTCTCAGTAATACCGGCAGCAGGCTGCACAACGCCAGCAGTCGGTTGCCGAGAATAACCGTGGACAATggTATCAGTTCGAGGAATGCACTCGACGAAAATACTCCAGACGTTGAGGATATTTTGAAGGAAATGACATCGACGGTAACAACGCCACTGTCGGCCATCGCTCAGACACCCAGGAAAGAGATCGAGTCCAAATACACCTTTAACCCTGTGCTTGCTAAGcTTACGGAAGTCGCAGCACCTGAACCCTCGAGGCCtcgtaagtaa
- Protein Sequence
- MGIFRGKAKKMKGFFLSLFHRESGKDQALLLFARFAVNPDTHDRATRQIQSKLGSYSALRPMVMDDPKRLIGIDVLAASTSSGSTHPSAPRLPSGSGSSTRSSPSSQEFKKPGGPRSSSNSSNFNSSSHASAQRGGFVKPADGKPPYGGRGGYPGQPVKHGGNSNDHRSHGLLPAKGPPPPNSVGSSSAISSLSNTGSRLHNASSRLPRITVDNGISSRNALDENTPDVEDILKEMTSTVTTPLSAIAQTPRKEIESKYTFNPVLAKLTEVAAPEPSRPRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01389419;
- 90% Identity
- iTF_01389419;
- 80% Identity
- -