Scon012059.1
Basic Information
- Insect
- Synergus coniferae
- Gene Symbol
- lilli
- Assembly
- GCA_032164275.1
- Location
- JAUEJJ010000045.1:1868758-1882959[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-05 0.63 9.9 1.2 44 140 12 103 9 177 0.60 2 2 1.4e-07 0.0038 17.2 0.1 345 381 194 231 168 239 0.82
Sequence Information
- Coding Sequence
- ATGTTTGTGTTTCAGGTGAATCCCGATACTCACGACCGAGCAACTCGACAGATCCAGTCGAAATTGGGTAGTTATTCGGCGCTGAGGCCTATGGTGATGGATGATCCGAAGAGGCTGATCGGAATCGATGTGTTGTCAGCGTGCCCGACTTCGGTCTCGACGCACCCATCGGCACCGAGGCTTCCAAGCGGCTCCGGATCCAGTACGAGGAGTTCGCCTTCGTCACAGGAGTTCAAGAAACCCGGGGGACCCAGGTCGAGTTCCAACTCGGCGAATTTCAACTCCTCGAGTCACGCCTCGGCGCAGCGCGGCGGGTTCGTCAAACCCGCTGATGGGAAACCACCCTACGGGGGAAGAGGCGGCTATCCTGGTCAACCAGTCAAGCATGGAGGCAATAGCAATGACCATCGAAGTCATGGCTTGCTTCCGGCAAAAGGTCCTCCGCCACCAAACTCGGTCGGAAGCAGCTCAGCCATCAACAGTCTAAGTAATACCGGCAGCAGACTGCACAACGCCGGTAGTCGGTTGCCGAGAATACCACTGGACAATGGTATCATTTCGAGGAATGCACTCGACGAAAATACTCCAGACGTTGAGGACATTTTGAAGgAAATGACATCAACGGTAACAACGCCACTGTCGGCCATTGCCCAGACACCAAGGAAAGAGATCGAGTCCAAATACACATTTAATCCACTGCTTGCTAAGcTTACGGAAGTCCCAGCACCTGAAACCTCGAGGCCTcgtaagtaa
- Protein Sequence
- MFVFQVNPDTHDRATRQIQSKLGSYSALRPMVMDDPKRLIGIDVLSACPTSVSTHPSAPRLPSGSGSSTRSSPSSQEFKKPGGPRSSSNSANFNSSSHASAQRGGFVKPADGKPPYGGRGGYPGQPVKHGGNSNDHRSHGLLPAKGPPPPNSVGSSSAINSLSNTGSRLHNAGSRLPRIPLDNGIISRNALDENTPDVEDILKEMTSTVTTPLSAIAQTPRKEIESKYTFNPLLAKLTEVPAPETSRPRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01392760;
- 90% Identity
- iTF_01392760;
- 80% Identity
- -