Basic Information

Insect: Synergus japonicus
Gene Symbol: -
Assembly: GCA_900474275.1
Location: UCOH01009290.1:41798-48634[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.7e-06 0.00048 20.8 1.2 1 23 157 180 157 180 0.97

2 14 0.12 12 7.0 0.1 2 23 242 264 241 264 0.88

3 14 0.00043 0.044 14.7 0.2 2 23 352 374 351 374 0.90

4 14 0.35 36 5.5 4.7 1 19 445 463 445 468 0.94

5 14 0.0026 0.27 12.2 0.5 1 23 716 738 716 738 0.98

6 14 0.015 1.5 9.8 0.5 5 20 827 842 825 844 0.91

7 14 0.01 1.1 10.3 0.7 1 23 994 1016 994 1016 0.98

8 14 0.15 16 6.6 0.3 6 23 1027 1045 1027 1045 0.94

9 14 0.0031 0.32 11.9 0.9 2 21 1050 1069 1049 1070 0.93

10 14 3.1 3.2e+02 2.5 0.3 2 10 1139 1147 1139 1159 0.78

11 14 0.0038 0.39 11.7 3.1 1 23 1164 1187 1164 1187 0.90

12 14 0.097 10 7.2 5.1 2 23 1193 1213 1193 1213 0.97

13 14 0.00096 0.099 13.6 1.6 3 23 1219 1240 1217 1240 0.92

14 14 0.0024 0.25 12.3 0.9 2 20 1248 1266 1247 1268 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.7e-06	0.00048	20.8	1.2	1	23	157	180	157	180	0.97
2	14	0.12	12	7.0	0.1	2	23	242	264	241	264	0.88
3	14	0.00043	0.044	14.7	0.2	2	23	352	374	351	374	0.90
4	14	0.35	36	5.5	4.7	1	19	445	463	445	468	0.94
5	14	0.0026	0.27	12.2	0.5	1	23	716	738	716	738	0.98
6	14	0.015	1.5	9.8	0.5	5	20	827	842	825	844	0.91
7	14	0.01	1.1	10.3	0.7	1	23	994	1016	994	1016	0.98
8	14	0.15	16	6.6	0.3	6	23	1027	1045	1027	1045	0.94
9	14	0.0031	0.32	11.9	0.9	2	21	1050	1069	1049	1070	0.93
10	14	3.1	3.2e+02	2.5	0.3	2	10	1139	1147	1139	1159	0.78
11	14	0.0038	0.39	11.7	3.1	1	23	1164	1187	1164	1187	0.90
12	14	0.097	10	7.2	5.1	2	23	1193	1213	1193	1213	0.97
13	14	0.00096	0.099	13.6	1.6	3	23	1219	1240	1217	1240	0.92
14	14	0.0024	0.25	12.3	0.9	2	20	1248	1266	1247	1268	0.93

Sequence Information

Coding Sequence: ATGGATGGAATAACACCGCAAGTTTTAGAGAGTGTTACAAATTCTGAAGTGAAAACTGTTGTCTCCACAACATGCAATGAAGTTACCATCAAGCAAGAAATCCAAGATATCACGGATGAAAACTTTGAACTTCAGTCTACAATATCGACAGGATCTGTGATCAATGTTGTCAAGATGGatcaacaaaaaatgtattcctTTTACAAAGAAGGcttcaatttaaaagactGTTTTATTCGCCTCGAAAAATGCGATAAAATCTGGGAAACTCTAAAGGTTATAAAGAATCTCCAGCTCTCAAATCCCAAGGAAACGAACAATGGGGACTATACCGCAGCTTTCCAGAATGCCATGCACAGTCATTCGAAGCCCTCGACACCAGAACCGATGCAGTACCATCCAGTCTTAAATAACGGAAATGCTGCCTTGCCCAATTTTCAATTCGCCATCAAGAGCTGGAAACGATTGTACACTTGTACTTATTGTGGAAAGCAATATACCGAGAACCGAAATCTAAAATTGCACATGGCAAAAGTTCACTCTGTATTTCCTACTTCCAAAAAAGTACCTATACCTAAGGAAGTTCCTGAAGTTCCtcttaataatgaaattatacgTCCTCTAGATATTCCTCGTTCCAAGGAGATTTCTCGTTCTAAAGAAGTTTCTCAAATCAAGGAAACTTCTCAACTTAACAAAACTTCTGTGAAGCCAAATCCTTTAGTCTGCCAAACGTGTGGCAAAAGTTATGCTGATGGTCGCTCAGTGGCTTCTCACTCTCTCCGTGTGCACGGAATTCTAACCGAGTACCATGAACGATGGTTAGCTCAACAGGAAAATCCAAACGACTTCACCGTGGAAGATCTACTCAAACGACACTCTTGCAAAACTTGTAGTAAAAGGTACAGCTGCATGAAAAGTTTACGTTTACATTATTTGCGAGAACACAATGTCGTTATTCCTATGATGCGAGGAGGTCGGAATGCAACAACCTTCATGTCATTGCCGAAAAAGACAGCAACACATTCCGGTGATATGCAAAAGCACATGAATGTCTGTAATATCTGCGGGAAAAGGTACACCAAAAACTGGTATCTGCGTGTACATTCACTCGAAGTTCATGGCATTCCCATGCCTTGTGGCAGAGTGAAGTTAAACTTCCCTACTAAGTTGCGGGtcataaagaaagaaattatcgAAGAACCTTCGTCTCCAAAAGAGGAACAGAAGTTCACTTCACCCGTAAACTCCTCAATATCAAATCAAAAACATACATTAGTAGTGACTGAAAAACTCAAATCCCCAATCATACCTGCGCGAGTATTAAAGATGTACCAATGTACGTCTTGTAAAAAGGAATTCATGTCTATTTCTAAATTACGCACACATTGCTTTTCTCGTCATGGAATTGTAATACCAAGGATACGAAAACCCTATCGGAAGAATAATTCTCTACCTGTAAAGATTGAGTATGAGACGAAGATTAAGTTAGAGGAAAAAAGAGAACCTCAAGTTTCGACTCCAAAGCAAGTGAGTTTGGACCGATATTTGAAAAGCTCTCCCATTGGGGGAAGCACATCCAACAAGATCAATTCGAATTTACCTCCACCACAAAGTGGTCCTATAAGAGAAAAAATCGTCAAACAAACAGTTCCTCCAAGAGAAACAATTGCTCCAAAGGAAAGCACTCCAGCCTCAGTAAAAGTAAACTCTCgttcaaaagaaaaagtttcgaAAGTACCAACAGAGTTTGTCAAGTGCAATTTGTGTTCTCGGGCCTGTAAAGACATTAGGAAGCACTACATTACTTATCATAAAATTCGTTATCCCGAGTCTGTAATGGAAGCTCCATTTTTCGTCACTGAAGCAGTTGGAAGCACTGTGGCCCCGGCAGTTATTCCTGAAAAAGAACAAGTGTTGGCATCAGAATCAGAAACGCAAGAAAGGGTTTCAACAAATAAACCCACGAAGAAGAGAAGACGTAGATTTTTCACAATGATGCCACGAAAGAGACGCAGGACTGAAGAACCTCGGCAACAAGAGGTTCCAGTGATTCCAAATCCAGTAACTCCAACTtctgaaataaataactttgaaGTCCAGTGTCCCAAAACTAAAACGGTGTCTGACCCTGACAAATCGTCGTTTAAATGCAATATCTGTGACGGATACTACGCGACTGCTAGAAGCTTGAGAATCCATAGAGACAAACATAAATCGAAGGGAGAGACTAGAGAGAACATTCATCTTATTAAGcatcattataaaaatggaTGGAAGTCAACTAAGAGAATTGAAATGCCAAGCTTTGATGAATCTGCAGTAAGCATGGATATGGATGCAGATGTGGACATGCAGGATGACTCCTTAACGTCTTACAATGGTAGCGTTACGCAGTCGTCTAGTTCGGAATCGAGGGATAATAATCGAAGATCGACGAGGAGTACAAGCTCTTATACTTTGAGTGAAATTACTTGCGAATGTGGAAGGTCCTTCCGCGATCCTCATACGTTATTTGTACACAAGGAGAAGTGCAGAACAGCGCATAGAATCGAAAGAGAGAAATCGATGGTTACGAGATCCAGTAGCGATCGGGATTCCGGAATTGGAATAAGTATTACGATAAAGAAGAAGAATGATTCGTATGAAATAGTCAGCAGGGACAGTGGCGATGATGATAAATCTAAGGATTCCATTACTTCGAAGGAAACGGATCAGATGTCCCGTTCTTCCGACACCAATTCTTCTAGCTTGGTCTTTAACGGTAGCAAGTACTGTGATCTGGTACAGGCACAATACAGTAAGGATCACAGCATCCTAAAGATTCAGGTTGCTGAAGATGACGAGGATGTAGACGTCGAGGACGACAGTCAATTAAACGTGACTGAGCCCGAACCCATGGACGTAGACACACTCAAAAAGCAGAATGAACCTCTCAGAAGCGAGAGTAGGATGGCAGATCCCTTAGATGTAGACCTTTACAGATGTGCAACATGTTTTGAACTTTTCCAAAAAGAAGCAGATCTAAAAAAGCACATGACCATTCATGAAAAACGTCCTGCCCGACAGGAATGTCCTTGTGGAAAGACGTTTAGAGGGTCTCAAAGTTTTCTCACCCACGTACAAGAATATCATCCTCTTTGGCTTCAGTGCGGATATTGCGAcgcgaaattttcaaatagtaAAGAGTATTATGCACACATTTGTAAAGTAAATCAAGGAAAAGATTTCCAAGATCTGCAAGAGGTTACCTGCAGCATTTGCCAGTTTAAAGTCAAGATGGCAAACTTTGATGCTCACGTAAAACGAGAACACTTAGTTCCCCAGGCTCCCTATTTATGCTATTATTGCCAAATGCGTTTCCTCAATGGCTTTCAAAGAAGAGCACACTTGAGTAAAGATCACATTAGACCCTCCTGTAAAGTTTGTGGCAAAACTTTACGATTTGACTTTGCAGCAAAGCACGAGGCTTATCATGACGGTCTTGGTTATCCTTGTCATATTTGCAAAAAAGCTTTCTCTTCCTTGAAACATGCAAATAGTCATAAATATGAAGTGCATGTCAGAGAAGATGAAGAGtgcaaaatttgtaaaaaagttattagtcATAGCCATATGAGATATCATATGCGAATGCATTCTAGCAAggataattgtaaaatttgtaataagaattttcacaataaCCGTGCGTTAAAAGATCACATTTATTTGATACATGCAAATAATTATCCATTTGTAAAGTGTGATAATTGTCAACTGTCCTTTACATCTGAAAGGTATCTTAAACGACATTTTAATCAAGATGTATGCACAAATGTTAGTAAAGCATCGAATGTAATGGAAAGTAAGAAGGTGGAAGAAAGTGAGGAGGAAGAAGATGTGGAGGCGGAGGACACTGAGGAGAGTGAAACAGAGGAGGTGGATGTAACTGAGGAAGTAGACGAAACTCAGAAGGTGAAGAACGTTTCCAAAATTAGAGCCACTTTGAACAAGAAAACTGAGAAGAGCAAACGAAAAGAGGAAGAGAAGACTTTAAAGGAAGTATCTTTGATTACGGAAACGAATGGGGAGACAGAAATTTCTGAGGAGGAAGATAGTATGGTGCTGAACATATCTGAAGATGTAACAGAAACTGAAGAAATAGAAACTAAGGAAGTGAACGTTCCTGGGAATGTAAAAGGAACTAAGAAGTCGGAAGGAATTTCGGGGATTAAAGAAActgaagagagaaaaaaagattcggaaaaaggaaaaatttcaGAGATGGAAGTGGTTTTGAAGAAAGAAGACACTTTAGAGAATGACGAAACTTCGCAGAAGGAAACTGAGGAGATGATAGAAAATACTTTGGAGAAGGATGTTGTTTCAGAGAATAAGAAAGCTCCTTTGATACCAGAAAATTCAGACTTAAGAAGACTTGCTGAGACAAAAGAAATCTCCATGACGAAAGAAATTCCAAGCAAGAAACATGTTGAGTCGTaa
Protein Sequence: MDGITPQVLESVTNSEVKTVVSTTCNEVTIKQEIQDITDENFELQSTISTGSVINVVKMDQQKMYSFYKEGFNLKDCFIRLEKCDKIWETLKVIKNLQLSNPKETNNGDYTAAFQNAMHSHSKPSTPEPMQYHPVLNNGNAALPNFQFAIKSWKRLYTCTYCGKQYTENRNLKLHMAKVHSVFPTSKKVPIPKEVPEVPLNNEIIRPLDIPRSKEISRSKEVSQIKETSQLNKTSVKPNPLVCQTCGKSYADGRSVASHSLRVHGILTEYHERWLAQQENPNDFTVEDLLKRHSCKTCSKRYSCMKSLRLHYLREHNVVIPMMRGGRNATTFMSLPKKTATHSGDMQKHMNVCNICGKRYTKNWYLRVHSLEVHGIPMPCGRVKLNFPTKLRVIKKEIIEEPSSPKEEQKFTSPVNSSISNQKHTLVVTEKLKSPIIPARVLKMYQCTSCKKEFMSISKLRTHCFSRHGIVIPRIRKPYRKNNSLPVKIEYETKIKLEEKREPQVSTPKQVSLDRYLKSSPIGGSTSNKINSNLPPPQSGPIREKIVKQTVPPRETIAPKESTPASVKVNSRSKEKVSKVPTEFVKCNLCSRACKDIRKHYITYHKIRYPESVMEAPFFVTEAVGSTVAPAVIPEKEQVLASESETQERVSTNKPTKKRRRRFFTMMPRKRRRTEEPRQQEVPVIPNPVTPTSEINNFEVQCPKTKTVSDPDKSSFKCNICDGYYATARSLRIHRDKHKSKGETRENIHLIKHHYKNGWKSTKRIEMPSFDESAVSMDMDADVDMQDDSLTSYNGSVTQSSSSESRDNNRRSTRSTSSYTLSEITCECGRSFRDPHTLFVHKEKCRTAHRIEREKSMVTRSSSDRDSGIGISITIKKKNDSYEIVSRDSGDDDKSKDSITSKETDQMSRSSDTNSSSLVFNGSKYCDLVQAQYSKDHSILKIQVAEDDEDVDVEDDSQLNVTEPEPMDVDTLKKQNEPLRSESRMADPLDVDLYRCATCFELFQKEADLKKHMTIHEKRPARQECPCGKTFRGSQSFLTHVQEYHPLWLQCGYCDAKFSNSKEYYAHICKVNQGKDFQDLQEVTCSICQFKVKMANFDAHVKREHLVPQAPYLCYYCQMRFLNGFQRRAHLSKDHIRPSCKVCGKTLRFDFAAKHEAYHDGLGYPCHICKKAFSSLKHANSHKYEVHVREDEECKICKKVISHSHMRYHMRMHSSKDNCKICNKNFHNNRALKDHIYLIHANNYPFVKCDNCQLSFTSERYLKRHFNQDVCTNVSKASNVMESKKVEESEEEEDVEAEDTEESETEEVDVTEEVDETQKVKNVSKIRATLNKKTEKSKRKEEEKTLKEVSLITETNGETEISEEEDSMVLNISEDVTETEEIETKEVNVPGNVKGTKKSEGISGIKETEERKKDSEKGKISEMEVVLKKEDTLENDETSQKETEEMIENTLEKDVVSENKKAPLIPENSDLRRLAETKEISMTKEIPSKKHVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01393846;
90% Identity: iTF_01390635; iTF_01394681;
80% Identity: -