Basic Information

Insect: Synergus gifuensis
Gene Symbol: -
Assembly: GCA_904066015.1
Location: CAJFCO010000397.1:40253-47083[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 4.4e-06 0.00062 20.9 1.2 1 23 158 181 158 181 0.97

2 16 0.11 15 7.0 0.1 2 23 243 265 242 265 0.88

3 16 0.78 1.1e+02 4.4 6.3 1 23 294 317 294 317 0.95

4 16 0.00081 0.11 13.7 0.3 2 23 353 375 352 375 0.90

5 16 0.1 15 7.1 4.5 1 19 446 464 446 469 0.94

6 16 0.0026 0.35 12.2 0.5 1 23 717 739 717 739 0.98

7 16 0.014 1.9 9.9 0.5 5 20 828 843 826 845 0.91

8 16 0.0032 0.45 11.9 0.6 1 23 995 1017 995 1017 0.98

9 16 0.17 23 6.5 0.3 6 23 1028 1046 1028 1046 0.94

10 16 0.79 1.1e+02 4.4 0.6 2 21 1051 1070 1050 1071 0.92

11 16 2.1 2.9e+02 3.0 1.2 1 23 1113 1136 1113 1136 0.92

12 16 8.3 1.1e+03 1.1 0.2 2 10 1140 1148 1140 1160 0.80

13 16 0.0033 0.46 11.8 3.3 1 23 1165 1188 1165 1188 0.90

14 16 0.52 72 4.9 5.5 2 23 1194 1214 1194 1214 0.97

15 16 0.0018 0.25 12.7 2.9 3 23 1220 1241 1218 1241 0.93

16 16 0.0023 0.32 12.3 0.9 2 20 1249 1267 1248 1269 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	4.4e-06	0.00062	20.9	1.2	1	23	158	181	158	181	0.97
2	16	0.11	15	7.0	0.1	2	23	243	265	242	265	0.88
3	16	0.78	1.1e+02	4.4	6.3	1	23	294	317	294	317	0.95
4	16	0.00081	0.11	13.7	0.3	2	23	353	375	352	375	0.90
5	16	0.1	15	7.1	4.5	1	19	446	464	446	469	0.94
6	16	0.0026	0.35	12.2	0.5	1	23	717	739	717	739	0.98
7	16	0.014	1.9	9.9	0.5	5	20	828	843	826	845	0.91
8	16	0.0032	0.45	11.9	0.6	1	23	995	1017	995	1017	0.98
9	16	0.17	23	6.5	0.3	6	23	1028	1046	1028	1046	0.94
10	16	0.79	1.1e+02	4.4	0.6	2	21	1051	1070	1050	1071	0.92
11	16	2.1	2.9e+02	3.0	1.2	1	23	1113	1136	1113	1136	0.92
12	16	8.3	1.1e+03	1.1	0.2	2	10	1140	1148	1140	1160	0.80
13	16	0.0033	0.46	11.8	3.3	1	23	1165	1188	1165	1188	0.90
14	16	0.52	72	4.9	5.5	2	23	1194	1214	1194	1214	0.97
15	16	0.0018	0.25	12.7	2.9	3	23	1220	1241	1218	1241	0.93
16	16	0.0023	0.32	12.3	0.9	2	20	1249	1267	1248	1269	0.93

Sequence Information

Coding Sequence: ATGGATGGAATAACACCTCAAGTTTTAGAGAGTGTTACAAATTCTGAAGTGAAAACTGTTGTCTCCACAACATGCGATGAAGAAGTTACCATCAAGCAAGAAATCCAAGATATCACGGATGAAAACTTTGAACATCAGTCTACAATATCGACAGGATCTGTGATCAGTGTTGTCAAGATGGATCACGAAAAAATGTATTCCTTTAAAAAAAAAGGCTTCAATTTAAAAGACTGTTTTATTCGCCTCGAAAAATGCGATAAAATCTGGGAAACTCTAAAGGTTATAAAGAATCTCCAGCTCTCACATCCCAAGGAAACTAACACTAGGGATTATGCAGCAGCTTTCCAGGATGCCATGCACAGTCATTCGAAGCCCTCGACACCAGAACCGATGCAGTACCATCCAGTCTTAAACAACGGAAATGCTGCCTTGCCCAATTTTCAGTTCGCCATCAAGAGCTGGAAACGATTATACACTTGTACCTATTGCGGAAAGCAATATACCGAGAACCGAAATCTAAAATTGCACATGGCAAAAGTTCACTCTATATTTCCTACTTCCAAAAAAGTACCTATACCTAAGGAAGTTCCTCAAGTTCCTCTTAATAATGAAATTTCACGTCCTCTAGATATTCCTCGTTCCAAGGAGATTTCTCGTCCTAAAGAAGTTTCTCAAATCAAAGAAACTTCTCAACTTAACAAAAATTCTGTGAAGCCAAATCCTTTAGTCTGCCAAACGTGTGGCAAAAGTTATGCTGATGGTCGCTCAGTGGCTTCTCACTCTCTCCGTGTGCACGGAATTCTAACCGAGTACCACGAACGATGGTTAGCTCAACAGGAAAATCCCAACGACTTCACCGTGGAAGATCTACTCAAACGACACTCTTGCAAAACTTGTGGTAAAAGGTACAGCTGCATGAAAAGTTTACGTTTGCATTATTTGCGAGAACATAATGTCGTTATTCCTATGATGCGGGGAGGTCGGAATTCAACCTCCTTCATGTCATTGCCGAAAAAAACAGCAACACATTCCGGTGATATGCAAAAGCACATGAACGTCTGTAATATGTGCGGGAAAAGGTACACCAAAAATTGGTATCTGCGTGTACATTCACTCGAAGTTCATGGCATTCCCATGCCTTATGGCAGAGTTAAGTCAAGCTTCCCTCCTAAGTTGCGTGTCATAAAGAAAGAAATTATCGACGAACCTCCATCCCCAAAAGAGGAACAAAAGTTCTCTCCACCGATAAATTCCTCAATATCAAATCAAAAGCATAAGTTAGCTGAAACTGAAAAACCGAAATCCCCAATCATATCTGCGCGAGTATTAAAGATGTACCAATGTACGTCTTGTAAAAAGGAATTCATCTCTATTTCCAAATTACGCACACATTGCTTTTCTCGTCATGGAATTATAATACCGAGGATACGAAAACCTTATCGGAAGAATAATTCTGTACCTGTAAAGATTGAGTATGAGACGAAGATTAAGTTAAAGGAAAAAAGAGAACCTCAAGTTTCGACTCCAAAGCAAGTCAGTTTGGATCGATACTTGAAAACCTCTCCCATTGGGGGAAGCACATCCAACCAGATCAATTCGAGTTTACCTCCACCACAAAGTGGTCCTATAAGAGAAAAAATTGTCAAGCAAATAGTTCCTCTAAGAAAAACTGTTGTTCCAATGGAAAGCGCTCCAGCCTCAGTAAAAGTAAACTCTTGTTCAAAGGAAAAGGTTTCGAAGGTACCAACAGAGTTTGTCAAGTGCAATTTGTGTTCTCGGGCCTGTAAAGACATCAGGAAGCACTACATTGCTTATCATAAAATTCGTTATCCCGAGTCTGTAATGGAAGCTCCATTCTTCGTCAGTGAAGCAGTTGGAAGCACTGTGACTCCGGCAGTTGTTCCTGAAAAAGTACAAGTGTTGGCATCAGAATCAGAAACGCAAGAAAAGCTTTCAACAAATAGACCCACGAAGAAGAGAAGACGTAGATTTTTCACAATGATGCCGCGAAAGAGGCGCAGGACTGAAGAACCTCGGCAACAAGAGGTTCCAGTGATCCAAAGTCCAGTAGCTCCAACTCCTGAAATAAATGACTGTGGAGTCCAGGGTCGCAAAACTAAAACGGTGTCTGACCCTGACAAATCGACGTTTAAATGCAATATCTGTGACGGATACTACGCAAATGCTAGAAGTTTGAGAATCCACAGAGACAAACATAAGTCGAAGGGGGAGACTAGAGAAAACATTCACCTTATTAAGCATAATTATAAAAATGGATGGAAGTCAACTAAGAAAATCGACATGCCAAGCATTGATGAATCTGCAGTAAGCATGGATATGGATGCAGATGTGGACATTGAGAATGACTCCTTAACGTCTTACAATAGCAGCGTTGCGCAGTCGTCTAGTTCAGAATCGAGGGATAGTAATCGAAGATCGACGAGGAGTACAAGCTCTTACACTTTGAGCGAAATTACTTGCGAATGCGGAAGGTCCTTCCGCGATCCTCATACGTTATTTGTGCACAAGGAGAAATGCAGAACAGCGCATAGAATCGAAAGAGAGAAATCGATGGTTCCGAGATCCAGTAGCGATCGAGATTCTGGAATTGGAATAAGTATTACGATAAAGAAGAAGAATGATTCGTATGAAATAGTCAGCAGGGACAGTGGCGACGATGATAAATCTAAGGATTCTATTACTTCGAAGGAAATGGATCAGATGTCCCGTTCTTCCGACACTAATTCCTCTAGCTCAGTCTTTAACGGTAGGAAGTACTGTGATCTGGTACCGGCACAATGCAGTAAGGACCACAGCATCCTAAAGATTCAGGTTGCCGAAGATGACGAGGATGTAGATGTCGAGGACGACAGTCAAATAAACGTGACTGAACCCGAACCCATGGACGTAGACACACGCAAAAAGCAGCATGAACCTCTCAGAAGCGAGAGTAGGATGGCAGATCCCTTAGATGTAGACCTTTACAGATGTGCAACATGTTTTGAACTTTTCCAAACCGAAGGAGATCTAAGAAAGCACATGACCATTCATGAAAAACGTCCTGCCCGACAGGAATGTCCTTGTGGAAAGACGTTTAGAGGGTCTCAAAGTTTTCTCTCCCACGTTCAAGAATATCATCCTCTCTGGCTTCAGTGCGGATATTGCGACGCGAACTTTTTAAATAGTAAAGAGTATTATGCACACATTTGCAAAGTAAATCAAGGAAAAGATTTCCAAGATCTGCAAGAGGTTACCTGCAATATTTGCCAGTTTAAAGTCAAGATGGTAAATTTTGATGCTCACGTAAAACGAGAACACTTGGTTCCCCAAGCTCCCTATTTATGCTATTATTGCCAAATGCGTTTCTTCAATGGCATTCAAAGAAGAGCACACTTGAGTAAAGATCACACTAGACCTTCCTGTAAAGTTTGTGGCAAAATTTTACGATTTGATTTTGCAGCAAAGCACGAGGCTTATCATGACGGTCTTGGTTATCCTTGTCATATTTGTAAAAAAGCATTCTCTTCCATGAAACACGTGAATAGTCATAAATATGAAGTTCATGTCAGAGAAGATGAGGAGTGCAAAATTTGTAAAAAAGTTATTAGCCATAGGCATATGAGATATCATATGCGAATGCATTCTAGCAAGGATAATTGTAAAATTTGTAATAAGAATTTTCACAATAACCGTGCGTTACAAGATCACATTCATTTGATACATGCAAATAATTATCCATTTGTAAAGTGTGATAATTGTCAATTGTCCTTTACATCTGAAAGGTATCTTAAACGACATTTTAATCAAGATGTTTGCACAAATGGTAGTAAAGCATCGAATGTAAAGGAGGAAAGTAAGGAGGTGGAAGAAAGTGAGGAGGAAGAAGATGTGGAGGTGGGGGACACCGAGGAGTGTGAAACTGAGGAGGTGGACGTAACTGAAGAAGTGGACGAAACTCAGGAGGTGAAGAACGTTTCCAAAATACGAGCCACTTTGAACAAGAAAACTGAGAAGAGCAAACAAAAAGAGGAGGAGGAGACTTTAAAGGAAGTAACTTTGATTACGGAAATGAATGGGGAGACAGAAATTTCTGAGGAGGAAGAAACTATGGTGCTGAACATATCTGAAGATGTAACAGAAACTGAAGAAATAGAAACTAAGGAGGTGAACGTTCCTGAGAATGTAAAAGAAACTAAGAAGTCGGAAGAAATTTCGGTGATTAAAGAAACTGAAGAGAGAAAAGAAGATTCGGAAAAAGGAAAAATTCCAGAGATGGAAGTACTTTTGAAGAAAGAAGACACTTTAGAGAATGACGGAACTTCGCAGAAGGAAACTGAGGAGATGATAGAAAAGACTTTGGAGAAGGATGTAGTTTCAGAGAATAAGAAAGCTCTTTGA
Protein Sequence: MDGITPQVLESVTNSEVKTVVSTTCDEEVTIKQEIQDITDENFEHQSTISTGSVISVVKMDHEKMYSFKKKGFNLKDCFIRLEKCDKIWETLKVIKNLQLSHPKETNTRDYAAAFQDAMHSHSKPSTPEPMQYHPVLNNGNAALPNFQFAIKSWKRLYTCTYCGKQYTENRNLKLHMAKVHSIFPTSKKVPIPKEVPQVPLNNEISRPLDIPRSKEISRPKEVSQIKETSQLNKNSVKPNPLVCQTCGKSYADGRSVASHSLRVHGILTEYHERWLAQQENPNDFTVEDLLKRHSCKTCGKRYSCMKSLRLHYLREHNVVIPMMRGGRNSTSFMSLPKKTATHSGDMQKHMNVCNMCGKRYTKNWYLRVHSLEVHGIPMPYGRVKSSFPPKLRVIKKEIIDEPPSPKEEQKFSPPINSSISNQKHKLAETEKPKSPIISARVLKMYQCTSCKKEFISISKLRTHCFSRHGIIIPRIRKPYRKNNSVPVKIEYETKIKLKEKREPQVSTPKQVSLDRYLKTSPIGGSTSNQINSSLPPPQSGPIREKIVKQIVPLRKTVVPMESAPASVKVNSCSKEKVSKVPTEFVKCNLCSRACKDIRKHYIAYHKIRYPESVMEAPFFVSEAVGSTVTPAVVPEKVQVLASESETQEKLSTNRPTKKRRRRFFTMMPRKRRRTEEPRQQEVPVIQSPVAPTPEINDCGVQGRKTKTVSDPDKSTFKCNICDGYYANARSLRIHRDKHKSKGETRENIHLIKHNYKNGWKSTKKIDMPSIDESAVSMDMDADVDIENDSLTSYNSSVAQSSSSESRDSNRRSTRSTSSYTLSEITCECGRSFRDPHTLFVHKEKCRTAHRIEREKSMVPRSSSDRDSGIGISITIKKKNDSYEIVSRDSGDDDKSKDSITSKEMDQMSRSSDTNSSSSVFNGRKYCDLVPAQCSKDHSILKIQVAEDDEDVDVEDDSQINVTEPEPMDVDTRKKQHEPLRSESRMADPLDVDLYRCATCFELFQTEGDLRKHMTIHEKRPARQECPCGKTFRGSQSFLSHVQEYHPLWLQCGYCDANFLNSKEYYAHICKVNQGKDFQDLQEVTCNICQFKVKMVNFDAHVKREHLVPQAPYLCYYCQMRFFNGIQRRAHLSKDHTRPSCKVCGKILRFDFAAKHEAYHDGLGYPCHICKKAFSSMKHVNSHKYEVHVREDEECKICKKVISHRHMRYHMRMHSSKDNCKICNKNFHNNRALQDHIHLIHANNYPFVKCDNCQLSFTSERYLKRHFNQDVCTNGSKASNVKEESKEVEESEEEEDVEVGDTEECETEEVDVTEEVDETQEVKNVSKIRATLNKKTEKSKQKEEEETLKEVTLITEMNGETEISEEEETMVLNISEDVTETEEIETKEVNVPENVKETKKSEEISVIKETEERKEDSEKGKIPEMEVLLKKEDTLENDGTSQKETEEMIEKTLEKDVVSENKKAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01393846;
90% Identity: iTF_01392316;
80% Identity: -