Sjap012058.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Synergus japonicus
Gene Symbol
Lztr1
Assembly
GCA_900474275.1
Location
UCOH01006859.1:12711-16242[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.6e-13 4.9e-11 43.2 0.1 2 108 351 486 350 488 0.86
2 4 3.1 9.4e+02 0.4 0.0 75 108 485 518 479 520 0.81
3 4 3.6e-19 1.1e-16 61.4 0.0 9 96 580 667 571 682 0.83
4 4 3 9.2e+02 0.5 0.0 76 98 681 703 676 708 0.80

Sequence Information

Coding Sequence
ATGGATAGCGTAGCTACGGCTGAGTGCCTGACGTTGGACTTTGGCCCTTTTGAGTCCGTTCATCGCTGGCAACGAATGCCGGAATGCGCTGAATTTGTTGGAGCTAGACGTAGTAAACACACTGTTGTTGCTTTTAAAGACGCAATATACGTTTTTGGAGGCGATGATGGTAAGCGAATGTTAAACGACTTGCTTCTATTCGACGTGAAGGAAAAATCATGGTCTAGAGCTCTTGCAAATGGTGTTCCACCTGCACCACGATATCATCATTCTGCAGTTGTACATGATTCGTCCATGTTCGTTTTTGGCGGATATACTGGAGACATCCACTCGAACTCCAATCtcacaaataaaaatgacttGTTTGAGTACAAATTTCAAACGGGGCAATGGACAGAATGGAAATTCGTTGGAAAAACACCTGTTGCGAGATCTGCCCATGGTGCAGCCGTTTATGACAATAAATTGTGGATATTTGCTGGCTATGACGGCAACGCTCGTCTTAATGATATGTGGACAATTTCTTTACTGCCTGGAGATCTGAGAGTTTGGGAAGAAGTTGTTCAGTCTGGAGATTGCCCACCTACTTGTTGCAACTTCCCTGTGGCAGTGGCTCGAGAGTCTATGTTCGTATTTAGTGGACAGAGTGGCGCTAAGATCACGAATAGTCTCTTTCAGTTTCACTTCCGGGAAAAGAGGTGGACGCGAATTTCGGCGGAGCATATTTTAAGAGGAGCACCACCTCCTCCAGCTCGTCGTTACGGTCATACAATGGTCAGCTTCGATCGTCATCTTTACGTGTTCGGCGGAACTGCCGACTCTACATTACCTAACGACCTTCACTGCTACGATCTCGACACACAAACTTGGAATATTGTCTTGCCTTCAGTTGATAGTCAGATACCATCAGGTCGGCTATTCCATGCAGCGGCTGTGATCGGTGAGGCAATGTTTATTTTTGGTGGTACGGTTGACAACAATGTTCGATCTGGCGAAACCTatcgttttcaattttcttcctATCCAAAATGCACCTTACATGATGATTTTGGAAGACTCTTGAACAATCGTCTCTTTTGTGACGTGGAATTCATTGTTGGCGAAAGTGAAACGAAAATCCCTGCACATATTGCAATTGTAGCGGCACGATCACAATTTCTTCGGGCACGAATAAGACAGGCACGTGAACGTCGAGATagatattttgaagatttacttGGTGCAGTTGAAACATCAGTCAAAGATTTACCTCTCCTAGAGGTGAAACTAATAGACGCACTGCCAGAAGCTTTTGAGATGGTATTGAATTACATATACACAGATCGCATTGATCCTACCAAACGAATCGAAGATCCTTTAAGCAATCGGATCGTCCTTCTCATGATGGACGTTTACCGACTTGCTGTGCAATTCAATATGAAACGCCTCGAACAGCTCTGCGTTCATTATCTTGAAGCTACTGTTAGTCACGCTAACGTTTTAGAAGCTTTGCACAATGCAGCTCAACTAAAACTCTACTTcattaaggaattttgtttGAGTTTTGTGGTAAAGGAAAGCAACTATAATCACATTGTAATGAGCCAGGAATTTGAGAATCTGGATAAACCTTTAATGGTCGAAATCATTAGGCGTAGGCAAATGCCgcaaataaagaatttttctaaacaCTACGAATTGGGCACAGGTACTACTTTGGAACAGGACATGGAGGCGTTTTTGAAACAAGTTGGACGTGAATTTTGTGATATTACATTAATGTTGGACGGAGCACCAATTCCAGCACACAAGGCGGTACTTGCTGCTAGGTGTAGCTACTTTGAGGGCATGTTCCGATCGTTTATGCCTGAAAATAATACAGTCAATaTTCAAATTGGAGAAATGATTCCTTCTTCCGAATCTTTCGATTCTCTCTTGAGATACATTTACTACGCCGATGTGGCTATGCCACCAGAAGACTCTTTATATCTCTTCACCGCTCCGGTATTTTATGGTTTTACGAACAATCGATTGCAGGCGTTTTGTAAACAGAACCTAGAGATGAATGTTACGTTTGAAAATGTGATACAAATCTTGGAGGCAGCAGACAGAATGCAGGCGATCGACATGAAGAAATATGCTTTAAATCTAACTGTGCTTAATTTTTCTAAGGTGGCGCGATTGCCAAGATTAAAACAATTGAACAAGCAACTCTTGTTGGATATTCTAGAGGCTATCGCTGATGCACAAACTTGTGAGGCACAAACTTGTCAGGATATGACTAGCGACTGCTGA
Protein Sequence
MDSVATAECLTLDFGPFESVHRWQRMPECAEFVGARRSKHTVVAFKDAIYVFGGDDGKRMLNDLLLFDVKEKSWSRALANGVPPAPRYHHSAVVHDSSMFVFGGYTGDIHSNSNLTNKNDLFEYKFQTGQWTEWKFVGKTPVARSAHGAAVYDNKLWIFAGYDGNARLNDMWTISLLPGDLRVWEEVVQSGDCPPTCCNFPVAVARESMFVFSGQSGAKITNSLFQFHFREKRWTRISAEHILRGAPPPPARRYGHTMVSFDRHLYVFGGTADSTLPNDLHCYDLDTQTWNIVLPSVDSQIPSGRLFHAAAVIGEAMFIFGGTVDNNVRSGETYRFQFSSYPKCTLHDDFGRLLNNRLFCDVEFIVGESETKIPAHIAIVAARSQFLRARIRQARERRDRYFEDLLGAVETSVKDLPLLEVKLIDALPEAFEMVLNYIYTDRIDPTKRIEDPLSNRIVLLMMDVYRLAVQFNMKRLEQLCVHYLEATVSHANVLEALHNAAQLKLYFIKEFCLSFVVKESNYNHIVMSQEFENLDKPLMVEIIRRRQMPQIKNFSKHYELGTGTTLEQDMEAFLKQVGREFCDITLMLDGAPIPAHKAVLAARCSYFEGMFRSFMPENNTVNIQIGEMIPSSESFDSLLRYIYYADVAMPPEDSLYLFTAPVFYGFTNNRLQAFCKQNLEMNVTFENVIQILEAADRMQAIDMKKYALNLTVLNFSKVARLPRLKQLNKQLLLDILEAIADAQTCEAQTCQDMTSDC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00087267;
90% Identity
iTF_01393637; iTF_01392872; iTF_01389546; iTF_01390412; iTF_01394446; iTF_00980246; iTF_01391286; iTF_00011233; iTF_00200876; iTF_00064556; iTF_00676846; iTF_00460905; iTF_00880567; iTF_00879812; iTF_00881368; iTF_00882231; iTF_00883118;
80% Identity
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