Sjap018319.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Synergus japonicus
Gene Symbol
PAXBP1
Assembly
GCA_900474275.1
Location
UCOH01011288.1:13191-27516[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-27 1.3e-23 84.4 3.1 2 272 543 752 542 754 0.92
2 2 0.7 8.4e+03 -3.5 0.1 52 103 2287 2338 2282 2365 0.64

Sequence Information

Coding Sequence
atgTCAATGTTTAATAAGCCTAAACGGAATATTCGTCGACGACATTTCAACGATGATGACGAGGACAATGAGAACAGAATGGAGTCTGAAGATACTCAGCCTGTCAAAATTAAACcaaagaagaaggaaaaacCTAAACAAACGCTCCTTAGCTTTGGAGAGGAGCTCGAAGAAGCGGATGAGGGAGAAGTTTTTAAAGTGAAGAAGTCATCGAGAAGCAAAAAACTGATGAAACAGCTAGATcacgaaagaaaaaaaaagaaaggtgaAGAGAAAATGCAAGTGGACTCTGAATCAGCGAACATGTCTGTTAAGCAGGAAAAAGATTTAGAAATAAAGACAGATGATCTAGTAgtaaaaataaaaaacacagGACCCCTTATTCTAAATGGAAGGGCTGCATTGACCGCCGGAAAGGATGACTACTCGTCCAATGAAGAGGATGAAAACGAATTTCAAGGGCAtaaatttcagagaaatttATGCCGAGAAGACCGGACAGACActatgaaaatgtttttagaaaGTGGATGTATACCTGACCCTGCAATGATTCATGCGGCAAGAAAGCAAAGACAAAAGGCTCGGGAATTAGGAACCGATTATATTCCTATTCAGGAGaaaagCGACGTGAAAGGAACGTCGAGGTTGATAAGAGAAGAAGATCACGACAGGAGCGATGATGATTCTGAAGATAGGCTTGATATGTTGGTCAGCACCGAAGCGCGTGATAAAGAGAAAAGGCGGGAAGCAATCTTTGCTTCGCAAGTTAAAAACAACTtttcagACGATGAGGAAAGCGAGCATGGTAATGGTGAAGAGGAATGGGAAGCTCAGCAGTTTAGAAAGGGTGTAACTGGAGCtcagATCGCAGCTGCCCAAGAATCTCTAATGCAACAGCAGTATATGGGAATGGCCGTAAATCCAATGATGGCCCCAGGAGTGCCGAtggaaataataatgatgCCAGCACCTCCGCCTCCACCGTTGATTCATCCACCCGATCCCACGAAAGTTGTTCCTGTCGCTCCagaggaaattttgaataaaatgcgTGGAAGATTACAGAGTTTAAAGGAAGTCCATCGACGACATCAATTGGATTATGAGCAGTTACAGCTAGAATTAGTGCAAACGGTAAAGGAACTGGACGAGGGAGAAGAACGCGCACCGCTGTTAGCACGTCGCTTCAAAGATTACCAAGAGTTGCGTGGGTATGTCTCTGATTTGTCAGAGTGCTTTAATGAGAAGCTGCCTCAAATTCTTGGACTGGAGCAACGCTGGCTAGATCTTTACAGTGAGCGATCACTTGAAATCATGGAGAGACGTCGACAAGACACGAGAGATCAAGCTGAAGAAATTACCACTGCTGCAAGAGGCCAAACTGTAAGGCGAGGCCCAGAAGATGATGCTCGAATTCGAAGAGCCACGGAAAGAGAAGGAAGACGAGCTCGACGGAGAAGAGCTCGAGAATTGACTCCAACTTTACCCAGACATTTAGACGGAATGTCGAGTGATGACGAAGTTACAGAACAGAAAAATCTCGCTTTTAAACAAACTAAAGAGGAGATCGACGAAGAAACTAAGGATGTTTTCTCCGACGTAGTGGATGATTTTTGTACCGTAAAAGGAATTCTTTCCAGGTTCGAAGCATGGaaatcaagagattttgaagcTTACTCGGATGCTTACGTTTCTATGTGTATACCGAAAATGATTTCTCCTTTAATCAAATTGCAACTTGTTACCTGGAATCCTATAATGGAAAGTGCCGATTTAGAACGAACAAAATGGTATAGTTCGTTACTTTTGTACGCTTGGGACAGCAAGGAAACGGAAGAATCATTAAGAAAAGATCCGGATATTCGAGTAGTTCCATCTactatagaaaaaattgtcattCCTAAATTAACTTcTATTGTCGAAAAGGTTTGGGACCCCATGTCCACTTCTCAAACTCTTCGTCTCGTAGGAACTGTCAATCGATTAATAAGAGATTATCCGAATATGAACGACGAGAGTAAAATATTACAAGTACTTTTCAATGCAATCTTTGATAAAATCCAATCTGCTGTAGAAAACGATGTCTTCATCCCAATTTTCCCAAAGCAAGTTTTAGATCCTAAACATCAATTCTTTCAAAGACAATTTGCAATGGCGGTGAAGCTTCTAAGAAATTTGCTGAGCTGGCAAGGACTTTTAGGAGACAACAGGCTGAAGAATTTGGCCTTAGGATCACTTTTGAATCGATACCTTTTAGCTGGATTGAGAGTTTCTCCACCAACAGATGCGCTTTCAAAAGCTAATATGATTATGAGCACTCTTCCTCGTGCCTGGCTACAAGGGGAAACGATTGAACAATTGAAGATGTTCGCCACTTTAATTCAACAACTGAGTGATCTTTTGGACCAAGCAAATCCGGCTCACAACAGGCTTCTGTCGCCAGACTATAGACAAagaattacatttatttttatctttctatgTATGACTCGTTCGGAAAGTTTGTTTACTAAAGGAAAAGAATACATTTATTCTTATGAGGCAATTTCTAATACGGGAGTTTTTTTGCCTTCAAGGGCTTCATCTTCATGGGGGTTCGAAGGAGTTCTGTCCATTAGGGCCGaagaaaattcaacttttatgCAGCTGCATAATATAAAAACCAACTCGTGGAATGGACCAAGTGACGAGAAAGGAGAAAATGTGGATATTAATGGCAGTGTTAAGGAacttttaaaaccttttaagcTTGAATATAAGATGGGtctcattgaaaattttaccgTCGAACCAGAGCAAGTCTGGGcgacaaatattaaaagaggCATCGCTGGTGTTTTTCAGTTGGACTTGAGCCGTCTGGATAAGCAAGTTGCATTTAATTCAATTGAggtGAATCACTATGGTCAGTGTTCAGTTGAATGCGTAGTTACAAATGAATCACCtactgaaaaattgattagaaaaaCAGTGGACCCTCGAACTTGTCGAGGACACTCACAGAGAACGTGGAGCAATGTACCACAAATGCAATGTCCTAATAGTGATCAGAATCCTATTCTGAAATCGAGTGAAAGACTTTATAGagtattttctaataatagtGAAATGACAATTTCATTCATCAACGCAACTGGAGGGATTTATATACAACCATTTCAAAGTCTTGGAGAAGCTCAATATATTTTCACTCAGCaacgttttcaaattttgtctATAAAGAACATCACTACaccaaatgaattaaaaagtgaTTCAATGCAGATAAAACACCTCCAACACGAACTTCCTGAGGATGATCTAACTCAAGGTCGAGGAGTTCTTGAAAAAGAAACTGTATTTAAAACTatagCAGTTCTCCTCGATCGTCTAAGCCAACGTCTCGAAAATCCCGGATTggatatagaaataaataatttacacaaTACGACGATATCTGTTCTTATTTACCATTTGGAAACTTTAAAGCGAGAAGATTTACTAACTGTATACAACAGTATCTCAGGAACAAGCTATAAAGATGAAACTGTAAGGAATATGTTTCTGGAAGCGCTTCCTCAAATCGGAAGTTCGGAAGCTGCCCTATTTGTTCTGGATTTAATTCAACAGAAAAAAGTCTCTGATATCACTGCTATTCAACTTTTGAGTCATCTTCCATTTTATATTAGAAAGCCAGATATGCAATTACTCGTCAGTTTACAACCCTTGTTGAATTTTCCTGACAAAATTGCAACAGAGGTTCAAAACACCGGAATCCTCACTTATGGAACTTTGATTTACAAGACGTGCCTTTTGTATTGTCCTTATGAAATGCTGGATGATTATGTGAGACTCTATCTTGACAAATTTACtgAAAGTGAGCAGTATGAAAAAAAGCTGGTTTGGTTGGAAGGATTATCGAATATTCAATTAGGAAgagttgttgaatttttagagcCAATTGCAAGTGGAGCTAATTCAGAATCTAGACATCTTCGAGTTTTGGCAGCCTGGGCTTCTTTACCAACCGCACCTTTAAAACCTGAAGTGatttatcCGATTTACTGGCCTATTTTGATGAATCGAACCGAGCATTTGGAATTGAGAATAGCAGCTCTAACATTGCTCATAGTTTCAAATCCCTCTCCGAGTCGATTGATTTCCCTTTTTTGGTACATGAAAGGAGAACCAGATATGcatctttacaatttcttcTACACAACTTTGAAATCGATGGAGCGAACCAATTTTCCTTGCTTCATTCACatagGAGGATTGGCTGCACAATTTACTCGAATGCTTCATAAGTcgacgaaaaataatttcatccttactggaaattatatttttgactatCAGGACACTTACCGACACTTCGGTACAATGATTCACGGAATTATAATTGCAAATCCTCTCACAAACATTCCGGAAGTAACTTACATTACTCTAAATAATCATGGCACTGGAATTAATCTGAATCACTTTTCGTTGTATATAAAAGCAGAGGGATTTTTACACACGATGACAACTTATTTGGAGAGCCCAACTCGAGTGCAGGATATTTTgaagcaatttaaaataaatgataaaagtttaaatccTGCGCATTTTGAAGTAATTGCTAGAGTTCAAGAAAAAGCTGTGCTCTGTTTACATTTAAATCGAACAACTCTGGTCAAAGCCTTTAAatATTTGGATTCTTTGCAACAAAGTACTTTCCACCTTTATCAAAATATGGAATTCCACGTTAATCAACAACGCGTTTCGGTACCCTTGAAGATGGAATCCATCCAGGTCACTGATTTGGGCACCAATGTGAGAATTGCAGCAACGGCTACTTCATTATTTTCCATGAGAGGAAATTTCACACACGTTCCCAATTCTCGCAATAATCATGTTATTTTAAGgACTTCGATTCACGGAACACAGgtgattgaaaattacaatCCTCTAACTGATTTGTGGTACGGGGCAGAACGAGCTCAATCTGTTCATGGCTATTTGCCAATAAATGTAACTTTTGGACTTCAAGAGAAGCTTTTTGTCTCCTACAATACTCCAGgagaaggTTCCAAACTGGGAATAACAGCTCACGTGCGGACAATTACGACCATCAGAGGTCCGAAAGTAAATGAGAAATTGAAGCCTGTTTGTCCAAAATGTATAACGCAGTatacagttaaaaaaaatccaattgaACCAATGaagACGAAGAAATTGTACGAGTCAAATATTCCTGAATTTGGAGGTCagttaaaagttgaaatttttgattgtGAAAAGATTATATCGAAGGAGAATATATTTCGAAATGTAATGCTTTCTCATCGTAGCAATTATCAAAACTGGCCAGcaattgaattcattttaatggGAATTCATTATCTGGATTACTTTACCTATGTAGCACCGAAAGGCAGTTGTGGGGTATTGGCACATATTGAACCGATCAGTCCTCACTCGACAGAGGTGAAAGTGGAATACTCAAAAAGCGAAAAGTACCACTTGGTATCTCTAAAACACAAGGATTTAACTTCCTCGGAGATTCTTCACCAATGGAACTTGGCAATTTTCTACGAAATTACAAGTTGGATTTCCGATTCTCTCAAAATAAAAGCCAGTAAAACTACGCCTGGCGAGAAAGTTCTAAAgtTTTGCTTTGAAGGAGAAAGAGAAGTCCCCTGGGAATGGAATTTTCTAAGTACACAAGCAAGCGATCCATCTTCAATTAAGATGAATTTAGTTTGGGGCCTTGCAGATTCGGCAAAAGGAAAATGCAGTGGATCCTccttattaataaaattatcaggAGAAGTTAGTCCTGAACAGATTTTTGCGAGTTTGGAAGATAAATGGCCATACAACGTTTGTCGAAAAGAAGCAGAAGGAAAGGCTTTCATTCCTTATACTCAAGCCTGTTATGAAACTTCCAGACAATTGTCGACACTGAGAAATTATCAAGCTACCGTTAAATTCGAAAATTTacctcaaaatttattaaaggtAGGATGGCGAATGCGAGCCTTTTATGATCTCATTGGAGGAAACAGTAGTAGTTTGGATTTAAAAGGCGTGAATGAATTCACTATTAAAGCCAAATTTCCTGCTGAAGCTAATGAAGgagaattaatattaaataatgacAGAGTGGAAATAGAATACGATCCGGATTTTGTCGATTACTTTTTGGTGAGAACGAGGCTACACAAGTTCACGGATAATCCTTTACTTCGTGCTCTTTTCAgTACTTGCATCTTATCGACGAATAGCGTTAGCTCTTCTCACAATATCAGTACAAcgcttgaaaaaaatcaagaaatattaattcttgGCCATTGTTATGATGAGAATCCTAAACTTTCTATTTCGGCAATTAATACAGGATCTTCTGTgactttaattttgaatgacGAATCAGATAGTTTAAATATCTCGTCTTTTAAACAAGGCGGCGCTTTGTACAATTATACGTCAGTTTTAAACATCGAAAGGAATTTCCAATTTGTTTCTCTACAATCAAAATGgGTGAGGTTGGATGAGAAATCGGTGGACGTGCTGTTATCAGAGTTTCAAATCTACATACACTGGACTCAAGAACacatcttaattttttatccgaattttattcaagaatttacTTGCGGTGCCTGCAATTCTCTTAATCCAAACCCAGAAGGATTTTAccagaaaatttcaagtcaaggcatcaaaaatgagaaaGACAAAGCTATTAAAATGGGTGAAAGTGTACCAAATCCAAATGACGGTTATTGGAGTACTTGTATTCGTCTGATAGAAAAAACCTTCGTACCTCAAAAACCTATAGGAGAATCACGGCTGTGTATTGAGCAAGATTTTCAACAATACAGAGCTACAGTTGTGAAAAACTTTCAGGACATTTTATCGATACTCCAACATATTTCAGATGAACAGAAGGAAGTGAAATCTTCATTGAATTCGCCaacaacaaagatttttaaaacctATTTGATGATTTTGATAGGAGAACATTGTGGTAAAAATCTTTGGACCACAGATGAATCAATCAAGATTTCTAAACAGCTAGAAGAGCTACTTTGCAATTTATATTCTTCTAATAGTCTCTCTCAACTTTTGGAACAAGATGACGATGATATCTCTCGAGTCCTAAAAACCCTTAggcataaattattaaaagataccTGGAAAACTTATCCTGCAGCCGTGGTTTGTTACAAGTGGTTTTTAGGCTTGATGAAAAAGTCAGCAATTCATCATTTAGGGGATATCATTCCTACagctttaattattttagatgATTTTGTGCCTGAGAACCAAATTCTGGGCTTGGAATGTGTTTCTGAAATTCTGAAGCAGGTTTACATGGAGAAGAAATTTGTGGAATCAGGATATGCGAAAATGGTTCtcgtaaatttaataaaattcacctatgtgaaagaaccaagatatACTTCTTTACTTTACAATTGTATGGGGAAGATTTTAAACTCGATAGAGTTCCACAATGGATTTTCAAATGCATTTGAGTGGTCCAATAGGGACGATATCCTTGATGATTTGTTGGTTAAAATGGAATTTGAGCAGAATCTAGAACTtcgaaattcatatttaaGTGTTTTACCCATAATTTTGAACTCTGTTAGTACTTTCAAATGGTGCGACAGAGTAATACGGATATTAAAAGGCTACTGTGAACATTACGATTCTAAACGTCTGAAATGCACTTTGGAATGTGTGAAAAGTATTCTTGTCACCTTGGAACCTAGACTTCCGGCTCATTCTGAGACCCTTTACATCATTTTTCTGAAACTCTATGTCGATTTGACTCAGGCTGTAATTGATGAAGACACCTTTAAAACTTTGGAAGACTGCATCTTCTTCTTATGTAAATCAACACCGGAACTTGGGAAAAAAATCTTACAAGATTGTAGGGTGCGAACATTTATAGAAAAACTTCCAGAACTTAATATGTAA
Protein Sequence
MSMFNKPKRNIRRRHFNDDDEDNENRMESEDTQPVKIKPKKKEKPKQTLLSFGEELEEADEGEVFKVKKSSRSKKLMKQLDHERKKKKGEEKMQVDSESANMSVKQEKDLEIKTDDLVVKIKNTGPLILNGRAALTAGKDDYSSNEEDENEFQGHKFQRNLCREDRTDTMKMFLESGCIPDPAMIHAARKQRQKARELGTDYIPIQEKSDVKGTSRLIREEDHDRSDDDSEDRLDMLVSTEARDKEKRREAIFASQVKNNFSDDEESEHGNGEEEWEAQQFRKGVTGAQIAAAQESLMQQQYMGMAVNPMMAPGVPMEIIMMPAPPPPPLIHPPDPTKVVPVAPEEILNKMRGRLQSLKEVHRRHQLDYEQLQLELVQTVKELDEGEERAPLLARRFKDYQELRGYVSDLSECFNEKLPQILGLEQRWLDLYSERSLEIMERRRQDTRDQAEEITTAARGQTVRRGPEDDARIRRATEREGRRARRRRARELTPTLPRHLDGMSSDDEVTEQKNLAFKQTKEEIDEETKDVFSDVVDDFCTVKGILSRFEAWKSRDFEAYSDAYVSMCIPKMISPLIKLQLVTWNPIMESADLERTKWYSSLLLYAWDSKETEESLRKDPDIRVVPSTIEKIVIPKLTSIVEKVWDPMSTSQTLRLVGTVNRLIRDYPNMNDESKILQVLFNAIFDKIQSAVENDVFIPIFPKQVLDPKHQFFQRQFAMAVKLLRNLLSWQGLLGDNRLKNLALGSLLNRYLLAGLRVSPPTDALSKANMIMSTLPRAWLQGETIEQLKMFATLIQQLSDLLDQANPAHNRLLSPDYRQRITFIFIFLCMTRSESLFTKGKEYIYSYEAISNTGVFLPSRASSSWGFEGVLSIRAEENSTFMQLHNIKTNSWNGPSDEKGENVDINGSVKELLKPFKLEYKMGLIENFTVEPEQVWATNIKRGIAGVFQLDLSRLDKQVAFNSIEVNHYGQCSVECVVTNESPTEKLIRKTVDPRTCRGHSQRTWSNVPQMQCPNSDQNPILKSSERLYRVFSNNSEMTISFINATGGIYIQPFQSLGEAQYIFTQQRFQILSIKNITTPNELKSDSMQIKHLQHELPEDDLTQGRGVLEKETVFKTIAVLLDRLSQRLENPGLDIEINNLHNTTISVLIYHLETLKREDLLTVYNSISGTSYKDETVRNMFLEALPQIGSSEAALFVLDLIQQKKVSDITAIQLLSHLPFYIRKPDMQLLVSLQPLLNFPDKIATEVQNTGILTYGTLIYKTCLLYCPYEMLDDYVRLYLDKFTESEQYEKKLVWLEGLSNIQLGRVVEFLEPIASGANSESRHLRVLAAWASLPTAPLKPEVIYPIYWPILMNRTEHLELRIAALTLLIVSNPSPSRLISLFWYMKGEPDMHLYNFFYTTLKSMERTNFPCFIHIGGLAAQFTRMLHKSTKNNFILTGNYIFDYQDTYRHFGTMIHGIIIANPLTNIPEVTYITLNNHGTGINLNHFSLYIKAEGFLHTMTTYLESPTRVQDILKQFKINDKSLNPAHFEVIARVQEKAVLCLHLNRTTLVKAFKYLDSLQQSTFHLYQNMEFHVNQQRVSVPLKMESIQVTDLGTNVRIAATATSLFSMRGNFTHVPNSRNNHVILRTSIHGTQVIENYNPLTDLWYGAERAQSVHGYLPINVTFGLQEKLFVSYNTPGEGSKLGITAHVRTITTIRGPKVNEKLKPVCPKCITQYTVKKNPIEPMKTKKLYESNIPEFGGQLKVEIFDCEKIISKENIFRNVMLSHRSNYQNWPAIEFILMGIHYLDYFTYVAPKGSCGVLAHIEPISPHSTEVKVEYSKSEKYHLVSLKHKDLTSSEILHQWNLAIFYEITSWISDSLKIKASKTTPGEKVLKFCFEGEREVPWEWNFLSTQASDPSSIKMNLVWGLADSAKGKCSGSSLLIKLSGEVSPEQIFASLEDKWPYNVCRKEAEGKAFIPYTQACYETSRQLSTLRNYQATVKFENLPQNLLKVGWRMRAFYDLIGGNSSSLDLKGVNEFTIKAKFPAEANEGELILNNDRVEIEYDPDFVDYFLVRTRLHKFTDNPLLRALFSTCILSTNSVSSSHNISTTLEKNQEILILGHCYDENPKLSISAINTGSSVTLILNDESDSLNISSFKQGGALYNYTSVLNIERNFQFVSLQSKWVRLDEKSVDVLLSEFQIYIHWTQEHILIFYPNFIQEFTCGACNSLNPNPEGFYQKISSQGIKNEKDKAIKMGESVPNPNDGYWSTCIRLIEKTFVPQKPIGESRLCIEQDFQQYRATVVKNFQDILSILQHISDEQKEVKSSLNSPTTKIFKTYLMILIGEHCGKNLWTTDESIKISKQLEELLCNLYSSNSLSQLLEQDDDDISRVLKTLRHKLLKDTWKTYPAAVVCYKWFLGLMKKSAIHHLGDIIPTALIILDDFVPENQILGLECVSEILKQVYMEKKFVESGYAKMVLVNLIKFTYVKEPRYTSLLYNCMGKILNSIEFHNGFSNAFEWSNRDDILDDLLVKMEFEQNLELRNSYLSVLPIILNSVSTFKWCDRVIRILKGYCEHYDSKRLKCTLECVKSILVTLEPRLPAHSETLYIIFLKLYVDLTQAVIDEDTFKTLEDCIFFLCKSTPELGKKILQDCRVRTFIEKLPELNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00881242;
90% Identity
iTF_01390212; iTF_01389425; iTF_01394297; iTF_01393517;
80% Identity
-