Ldro006488.2
Basic Information
- Insect
- Leptopilina drosophilae
- Gene Symbol
- PAXBP1
- Assembly
- GCA_032873175.1
- Location
- CM065479.1:7812367-7830471[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-27 1e-22 82.4 1.7 2 272 544 753 543 755 0.91 2 2 0.59 9.1e+03 -2.7 0.0 42 91 1235 1284 1225 1290 0.85
Sequence Information
- Coding Sequence
- ATGTCGCTTTTCAATAAGCCAAAGCGAAATATTCGTCGACGACATTTCAACGACGATGATGAAGATAATGAGAACAGAATGGAGACAGAAGACGCTCCAATTGTCAGAGTGAAAccaaagaagaaggaaaaaccCAAACAAACGCTCCTGAGCTTTGGAGAGGAGCTTGATGAAGCCGACGAGGGAGAAGTTTTTAAAGTGAAGAAATCGTCGAGAAGCAAAAAACTGATGAAACTACTTGAtcacgaaagaaaaaaaaagaaaggtgAAGAGAAAATGCAAGTGGACTCTGAATCATCGAACATGTCTATTAAGCAGGAAAAAGATTTAGAAATAAAGACAGATGATCTAGTAgtgaaaataaagaatactggTCCGTTGATTTTAAATGGAAGGGCCGCATTGGCTGCGGGCAAAGATGACTTTTCGTCCAACGAAGAAGACGAGGAGGAAGCGAATGGACATAAATTTCAGAAGAACAAAAATTCAGATAAAACAGATAGCATGAAAATGTTTCTAGAAAgtGGATGTATTCCTGACGCTGCTATGATTCATGCGGCTCGCAAAAGGAGGCAAAAAGCTCGGGAACTGGGAAGTGATTATATTCCGATTGAGGATCGAAGTGACGAGAAGGGAAAATCGAGATTAATCAGAGAAGAGGATCACGACAGAAGTGATGACGATTCCGAGGAGAGAATTGACATGATGGTGAATATGGAGGCGAGGGACAAGGAAAAGAGGAGAGAAGCCATCTTTGCCTCGCAAGCAAAACAAGATTtttcaGATGATGAGGAAAGTGAACACGGAAATGGAGAAGAGGAATGGGAAGCACAACAATTTCGGAAAGGTGTGACGGGAGCTCAAATAGCAGCAGCTCAGCAGGAATCTCTCATACAACAGCAGTACAATGCAAATATGAATACGAATCAAATGATTGCACCAGGTGTTCCTTTAGAAATGATAATGATGCCTGCACCGCCACCGCCGCCAATAATTCATCCGCCAGATCCAATGAAAACTGTGCCCGTCACTCCTGAGgaagttttgaataaaatgCGAGCCAGATTGGAGAATTTGAAGGAAGTTTATCGACGCCATCAATTGGATCAGGAGCAATTAAAAGAAGATCTCGTGCAAACGGTGAAGGAATTGGACGATGGAAAAGAACGTGCGCCATTGTTAGCACAACGCTTCAATTATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTTGATGAGAAGCTGCCATTGGTGGTTGGACTGGAGGAACGATGGCTGGATCTCTACGGGAAGAGGGCTTTAGAAATAATGGAAAGACGTCGACAAGACACGAGGGATCAAGCCGAGGAAATCACCACCGCTGCAAGGGGACAGACAATGAGAAGAGGTCCAGAGGACGATGCGAGAATTCGAAGAGCCACTGAACGAGAGGGAAGACGTGCTCGTCGAAGGAGAGCGCGGGAATTGGCCTCAAATGGACCAAAACACATGGACGGAATGTCGAGTGATGATGAAGTGACAGAACAACAGAATCTCGCTTTTAAACAGGCCAAGGAGGAAATTGATGAGGAAACAGAGGACATTTTCTCGGACGTTGTGGACGATTTTTCCACAGTGAAAGGAATACTGTCTAAATTAGAAACATGGAAAGCGACGGATATTGAGGCGTATTCAGACGCTTATGTTTCCATGTGTATTCCAAAAATGATTTCCCCTTTAATAAGATTACAATTAATTACTTGGAATCCCATAAAGgAAAATACCGATTTAGAGCGAACAAAATGGTATAATTCATTACTTTTGTACTCGTGGGACAGTAAAGAAACTGAAGAATCACTTCGAAAGGATCCAGACGTTCGATTAGTGCCATcaacaatagaaaaaattgtaattcctaGGTTAACTTCAATTGTGGAAAAAGTTTGGGATCCAATGTCCACGTCTCAAACGCTTCGTCTCATAGGAAcaattaaaagattaattagAGATTATCCAAATCTCAATGATTCGAGTAAACTTTTAGgaactttttttaatgcaatttttgataaaattcaatccGCTGTTGAAAACGATGTCTTCATTCCAATTTTACCGAAACAAGTTTTAGATACTaaacatcaattttttcaaagacaATTCGCAATGGCTGTTAAACTTCTTCGAAATTTGCTCAGTTGGCAGGGACTTTTGGGCGATACGCGACTTAAGAATTTGGCTCTTGGATCACTTTTGAATCGTTATCTTTTAGCTGGATTGAGAGTTTCTCCACCAACTGATGCACTCACGAAAGCAAATATGaTTATGAGTACGCTTCCACGAACTTGGCTACAGGGAGAGACGATCGAACATTTAAAAATGTTCGCCAATTTGATTCTTCAATTGAGCGAGCAATTAGATCAAGCGAATCCAGCACATAATTCTGACAGAATCCTCTCCCACACCATGAGATCTCCAGATGATCTCTTTGACAGGCATCTGTCCCGACACTATGGACGAAGAATTACATTCATTCTTATCTTCCTCTGTGTGACCCGCTCGGAAAGTTTATTTACAAAGGGAAAAACATACACATATTCTTATGAAGCGATTTCAAATACCGGAGTTTTTGTACCCTCGAGGGCCTCATCGTCATGGGGTCTTGAAGGAATTTTATCTATTAGAGTCGACGAGAATTCGGCTCTTTTACAgctGGAATCGTTGAAAATCAATTCGTGGAATGGACCAGGAAATGAAAAGGGAAATAATGTCGATGCAAATGGAACGGTGGATGAACTTTTGAAaccatttaaaattgattataataAAATGGGATTGATTGAAAATTTCAGTATTGAAACCGAACAAGTTTGGGCGACAAATATCAAGAGAAGCATTGCTGGAGTATTTCAACTCGATTTGGAAAATTTGGAGAAAGAAGTCGCGTTCACTTCGTCGGAGgtAAATCATTATGGCCAGTGTTCGATTGGATACGTGGTTACAAATGAGTCGttgagtgaaaaattaattcgaaaaacGGTGGACCCACGAACTTGTAGGGGACATCCGCAAAGAAATTGGAGTAATGTTCCTCGAATGCAATGTCCAAATGACGATCagaaTCCAATTTTAAAGTCAAGTGAAAGATTTTATCAAGTATCGTACAATGACAGTGGAAtgacaatattatttataaatgcaACCGGTGGAATTTACGTGCAACCATTTCAAAGTCTTGGAGAAGCTCAATATATTTTTACACAACAACGTTTTCTACTTTTGTCTGTAAAGGACGTGGATCCGAAGGAAACGAAACTTCCTTCACTTCAAATAAAACCTCTTCAGCATGAACTTCCTGACGAGGATTTAACACAAGGACGCGGAACTGTCGAAAAAGAAACTATTTATAAAACGattGCACTTCTTCTCGATCGATTAAGTCAACGATTGGAAAATCCAGGATTAGATACGGAAATTCACAACTTACACAATACAACAATATCGGTTCTTCTCTACTATTTGACAACTTTAAATCGACAAGATTTACAAATCGTTTACAATAACATTTCGGGAACGAGCTATAAAGAAGAAACAGTCAGaaacatgTTTTTGGAAGCTGTGCCACAAATTGGAACATCGGAGTCAGCTTTATTTATTTTGGATGTGATTCAGCAGAAAAAAGTTTCAGACATTACTGCCATTCAATTATTGAGTAATCTTCCGTTTCATATAAGAAAATTGGAAATTCAATTGCTCGTCAATTTACAGCCATTATTGAATTTTCCCGATAAAATTGCTCGCGAGGTGCAAAACACTGGAATTTTAACATACGGGactttaatttacaaaacttGTTTGTCGAATTGTCCATACGAAATGCTCGATGATTACGTTAAACTCTATCTCGACAAGTTTACcgAGAGTAAGCAATATGAAAAAAAGATGGTCTGGCTACAAGGATTGGCGAATATTCAATTGGGAAGAATTGTCGAATTTCTCGAACCAATTGCAAGTGGAAGTAAAGCAGAATCGAGACATCTTCGAGTTTCAGCCGCTTGGGCTTCTCTACCGACTGCACCTTTAAGACCTGACGtgaTTTATCCCGTCTACTGGCCAATACTAATCAACCGAACAGAACATTTAGAATTGAGAATTGCAGCTCTGACTTTACTGATTGTTTCAAATCCGTCACCGAGTCGATTGATTTCACTTTATTGGTACATGAAGGGCGAACCGGATATGCATCTCTATAATTATTTCTACACAACTCTGAAGTCTATGGAACGAACGAATTTTCCCTGTTACGTTCACATTGGAGGATTAGCCGCACAATTCACTCGAATGTTACCGAAAATCACGAGAAACAAATTCATCGTGACTGGTAATTATTTATTCGACTATCAAGATACCTACAGACATTTTGGCGCAATGATTCATGGAACTATAATCGCCAATCAATTGACGAATATTCCCGAGGTTTTTTATGTTACATTGAATAATCATGGAAGTGGGATTAATTTGAATCATGTTTCGTTGTACGTTAAAGCGGAAGGATTTTTGCACACGATGACTACTTATTTGGATAGTCCAACTCGAGTGTCGGATATTTTGAAGggatttaaaatcaataaaaaaagtcTCACTCCACcacattttgaaattattgtcagagtTCAGGAGAAAGCGGTTCTTTGCTTGCATTTAAATCGAACTTCTTTGATAAAAGCCTTTAAatataTAGACTCTCTGCAACAGAGTACTTTTCATCTTTATCAAAATATGGAATTTCACATAAATCAACAACGAATTCACGTTCCTCTAATAATGGAATCAGTGCAAGTCACTGATTTAGGGACGAACGCAAGAATTGCCGCCACTGCACATTCTCTCTTTTCAATGAGGGGAAATTTCACTCATGTTCCGAATTCGCGAAAAAATCACGTTATCGTGAGGACAACAATTCATGGAACGCAAGTTATCGAAAATTATAATCCATTGACGGATTTATGGCACGTGGCAGAACGCGCCCAATCAGTTCACGCCTATATGCCAATAAATGTCACATTTGGACTTCAGGATAAATTATTTGTCTCCTATAATACTCTGGAAGAGGGAGTGAAGACTGGAGTGACAGCCCATGTGAGAACAGTTACGAGTATTCGTGGGGCaaaattaaacaagaaattaaaaaatatttgtcccGAATGTACAAGAGAGTTTACGGTGAAGAAAAGTTACACCGATCCAATGAagACGAAAATTTTGTACGAGGCAAATATTCCCGAATTAGGAGGTCGAATGAAAATTCAAGTGTTTGACTGTGAAAAAATTATATCCAAGGAAAATGTCATTCAGAATGTAATGCTTTCACATCGCAGTAATCATCaaaaatcCCCGATTATGCAATTCATTTTGATGGGAATACATTACATTGATTATTTTTCGTACGTCCCTCCCAGAGGTAGTTGCGGAATTTTGGGCCATTTTGAACCTTCAAGTCTACTTTCTACTGaggtAAAAATTGAATACTCCCGAAGTGATAAATATCACTTAGTCTCCTTGAAGCACAAAGATTTGagttcatcaaaaattcttcatcaaTGGGACATGAAACTTGTTTACGATATTACAAGTTGGATTTCAGATTCACTCAAAATAAAAGCCAGTAGAACTACACCCGGTGAAAAAGTTCTGaagATTTGCTTCGATGGAGAAAGAGAGGTGCCATGGGAATGGAATTTCTTGAGTACAAACGCAAGTAATCCGTcgtcaataaaaatgaatattgttTGGGGCTATGGAGATTCGGCGAAGGGAAAATGCACTGGTTCTtcattactattaaaattatcgGGAGAAGTTAGTCGAGAGCAAACGTTCTCCAGTTTAGAGGATAAATGGCCATTTAATGTTTGCCGAAAGGAAACGGAAGGAAAACATTTTGTACCCTACACACAAGCTTGTTACGAAACTTCAAGAGAGTTATCAACTTTGAGAAACTATCAAGCGaatgttaaatttgaaaacTTacctgaaaatttattaaaggttGGATGGCGAATGCGAGCTTTTTACGATTTTATCGGCGGTAATAGTAGCAGTTTAGATTGGGAGAAaactaatgaattttcaataaaagcaAAATTCCCGGCAAATTCCGACGAAGGTGAATTACGTTTGAATAATGACAAAATCGATATTGATTATAATACcgatattattgattattttttgattaGAACGAGACTTCATAAATTCACCGACAATCCACTTCTTCGTTCTTTCTTCAGTACGtgtattttaaatatgaatatggTAAGCTCTTCGTACAATATTAGCaacaaacttgaaaaaaatcaagaaatgcTAATTTTGGGTCATTGTTACGACGAATATCCGAGACTCTCAATATCGGCAATAAATACTGGCAATGATATTAATTTAATCGTAAACGACGAATCGGACGATTTAACgataaaatcgtttaaaatggGAGGCGCTTTGTACAATCACACGTCACCGTTGAAAATTGACAGGAATTATCAATTTGTCTCGCTGGGAGCAAAATGGGCGAGATTGGACGACAAGTTGGTTGACATTTTATTATcggaatttcaaatattcataCGCTGGACTCAAGAGCATGTCTTATTGTTCTATCCAAATTTCATTCAAGAATTCACTTGCGGCCTTTGCACCGCTCATCAACCAAATACTCAAGatttatataaaagaatttcgaattag
- Protein Sequence
- MSLFNKPKRNIRRRHFNDDDEDNENRMETEDAPIVRVKPKKKEKPKQTLLSFGEELDEADEGEVFKVKKSSRSKKLMKLLDHERKKKKGEEKMQVDSESSNMSIKQEKDLEIKTDDLVVKIKNTGPLILNGRAALAAGKDDFSSNEEDEEEANGHKFQKNKNSDKTDSMKMFLESGCIPDAAMIHAARKRRQKARELGSDYIPIEDRSDEKGKSRLIREEDHDRSDDDSEERIDMMVNMEARDKEKRREAIFASQAKQDFSDDEESEHGNGEEEWEAQQFRKGVTGAQIAAAQQESLIQQQYNANMNTNQMIAPGVPLEMIMMPAPPPPPIIHPPDPMKTVPVTPEEVLNKMRARLENLKEVYRRHQLDQEQLKEDLVQTVKELDDGKERAPLLAQRFNYYQELRGYVTDLVECLDEKLPLVVGLEERWLDLYGKRALEIMERRRQDTRDQAEEITTAARGQTMRRGPEDDARIRRATEREGRRARRRRARELASNGPKHMDGMSSDDEVTEQQNLAFKQAKEEIDEETEDIFSDVVDDFSTVKGILSKLETWKATDIEAYSDAYVSMCIPKMISPLIRLQLITWNPIKENTDLERTKWYNSLLLYSWDSKETEESLRKDPDVRLVPSTIEKIVIPRLTSIVEKVWDPMSTSQTLRLIGTIKRLIRDYPNLNDSSKLLGTFFNAIFDKIQSAVENDVFIPILPKQVLDTKHQFFQRQFAMAVKLLRNLLSWQGLLGDTRLKNLALGSLLNRYLLAGLRVSPPTDALTKANMIMSTLPRTWLQGETIEHLKMFANLILQLSEQLDQANPAHNSDRILSHTMRSPDDLFDRHLSRHYGRRITFILIFLCVTRSESLFTKGKTYTYSYEAISNTGVFVPSRASSSWGLEGILSIRVDENSALLQLESLKINSWNGPGNEKGNNVDANGTVDELLKPFKIDYNKMGLIENFSIETEQVWATNIKRSIAGVFQLDLENLEKEVAFTSSEVNHYGQCSIGYVVTNESLSEKLIRKTVDPRTCRGHPQRNWSNVPRMQCPNDDQNPILKSSERFYQVSYNDSGMTILFINATGGIYVQPFQSLGEAQYIFTQQRFLLLSVKDVDPKETKLPSLQIKPLQHELPDEDLTQGRGTVEKETIYKTIALLLDRLSQRLENPGLDTEIHNLHNTTISVLLYYLTTLNRQDLQIVYNNISGTSYKEETVRNMFLEAVPQIGTSESALFILDVIQQKKVSDITAIQLLSNLPFHIRKLEIQLLVNLQPLLNFPDKIAREVQNTGILTYGTLIYKTCLSNCPYEMLDDYVKLYLDKFTESKQYEKKMVWLQGLANIQLGRIVEFLEPIASGSKAESRHLRVSAAWASLPTAPLRPDVIYPVYWPILINRTEHLELRIAALTLLIVSNPSPSRLISLYWYMKGEPDMHLYNYFYTTLKSMERTNFPCYVHIGGLAAQFTRMLPKITRNKFIVTGNYLFDYQDTYRHFGAMIHGTIIANQLTNIPEVFYVTLNNHGSGINLNHVSLYVKAEGFLHTMTTYLDSPTRVSDILKGFKINKKSLTPPHFEIIVRVQEKAVLCLHLNRTSLIKAFKYIDSLQQSTFHLYQNMEFHINQQRIHVPLIMESVQVTDLGTNARIAATAHSLFSMRGNFTHVPNSRKNHVIVRTTIHGTQVIENYNPLTDLWHVAERAQSVHAYMPINVTFGLQDKLFVSYNTLEEGVKTGVTAHVRTVTSIRGAKLNKKLKNICPECTREFTVKKSYTDPMKTKILYEANIPELGGRMKIQVFDCEKIISKENVIQNVMLSHRSNHQKSPIMQFILMGIHYIDYFSYVPPRGSCGILGHFEPSSLLSTEVKIEYSRSDKYHLVSLKHKDLSSSKILHQWDMKLVYDITSWISDSLKIKASRTTPGEKVLKICFDGEREVPWEWNFLSTNASNPSSIKMNIVWGYGDSAKGKCTGSSLLLKLSGEVSREQTFSSLEDKWPFNVCRKETEGKHFVPYTQACYETSRELSTLRNYQANVKFENLPENLLKVGWRMRAFYDFIGGNSSSLDWEKTNEFSIKAKFPANSDEGELRLNNDKIDIDYNTDIIDYFLIRTRLHKFTDNPLLRSFFSTCILNMNMVSSSYNISNKLEKNQEMLILGHCYDEYPRLSISAINTGNDINLIVNDESDDLTIKSFKMGGALYNHTSPLKIDRNYQFVSLGAKWARLDDKLVDILLSEFQIFIRWTQEHVLLFYPNFIQEFTCGLCTAHQPNTQDLYKRISN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00882960; iTF_01391972; iTF_00460518; iTF_01389425; iTF_01390212; iTF_01393517; iTF_01394297;
- 90% Identity
- iTF_00882960;
- 80% Identity
- -