Sito005859.1
Basic Information
- Insect
- Synergus itoensis
- Gene Symbol
- wek
- Assembly
- GCA_904066005.1
- Location
- CAJFCP010000050.1:3142202-3145634[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.66 89 4.6 0.2 2 23 136 158 135 158 0.89 2 15 0.011 1.5 10.2 0.1 2 23 163 185 162 185 0.91 3 15 0.28 38 5.8 0.8 2 23 386 407 385 407 0.96 4 15 0.44 60 5.2 0.1 2 23 413 435 412 435 0.94 5 15 0.00013 0.017 16.3 0.5 1 20 445 464 445 465 0.95 6 15 1.3e-05 0.0017 19.4 5.3 2 23 476 497 475 497 0.98 7 15 0.00074 0.1 13.9 1.1 1 23 510 532 510 532 0.98 8 15 9.7e-05 0.013 16.7 0.4 1 23 540 563 540 563 0.97 9 15 0.0001 0.014 16.6 2.9 1 23 569 591 569 591 0.94 10 15 0.00061 0.083 14.1 2.5 1 23 594 617 594 617 0.95 11 15 0.016 2.2 9.7 1.0 1 23 636 658 636 658 0.96 12 15 0.00015 0.02 16.1 2.8 1 23 664 686 664 686 0.98 13 15 1.1e-06 0.00015 22.8 0.8 1 23 691 713 691 713 0.97 14 15 9.5e-05 0.013 16.7 5.1 1 23 721 743 721 743 0.98 15 15 4.3e-05 0.0058 17.8 0.8 1 23 749 771 749 771 0.98
Sequence Information
- Coding Sequence
- ATGGACGTGGAAGCATTACTGGACGAAAGAGTGGATTCACAGCCGTTCGAGGAGAATATAGAAGAATTATGTCGACTGTGTGGACAGGTTTACGAAAATTCCGTATCAATATTCGACAACAAATTGTCAGTTGCTGAGAAAATCAGCAGATGTCTACCAATAATTGTTGTTGCCAATGATAATTTGCCTTCACAAATCTGTACCCAATGTTTCGCTTACTTAAATATCAGCTACAAGTTGATAGTGAACTCTACAAAAACTGACACTTTTCTGCGAAAAAAATTGCAAAAAAGTAACTTGGCTAAGAAAAATGCAAAGAATTCTGAATCTGATTTAATATCAAATGAAGGAACCACTGTTGTGCCAATGAAGAAGTTAAAGAAAATTGCTATTCACGGTCCTGTTACCTGTGAATTCTGCAACCTGGTGTTCGAAGACGTTAATGAATTTGATGAACACTTCGAATCCAGTCACATTTTGAAGTGGAAATGTAATTTCTGCGACGGAAGTTATGAATCATCTGATGAGCTGATTACACATAAAGCTTTGATGCATGCTGGAAATATAATAATTTGCAAAGCTTGCGTCGATGAAGAAGCGAATACGGGCCAGAAAAGACCGAAAATTGAAGAAGACAATTCCTCTTCTGGCGAGGAACGCGAGGATAAATTCTACATACCCGCGGACCCTGGGTTACCGCAATCGACAGAATCAGATTTCAACCCTCCTGATTCTCCTTCTATTTTAAAATCAGCTCTGAATCCTCCAACTGAAATTTCTAGCGATCAATCCTTTGTAACTCCTACCACTTCGAATTCAAAGGAAGTTGAAAGTACTAAATCTTCAAAGATGTTACCAGCAACTTTAATTGTTTCTCCCGCATTGACTTCAAAGTTTCTCTATGGTACAACCAGTGCAAATAAAGGCACTGCAAAAATTGTTTTTGATTCTTCTGTTGACACTCCTGAACTTATTTTTTCTGAAAACTCTGAATCTCCACCTTCTATAAACAATAGTGTACCACTCACGCCTTCGCCTAGTACATCTAAACTACCTAGGAACTCTTCTGTTGCCAAGTTAATTAAATCAGTGAGATTTGCGATGAATGAAAAAGTGGATAGAATAAGAGCCAACGAAAGAGCTAAGACTTGCATGTCTTGCGATGTGTGCCACCTTCAAGTAGATGATCAAAAACTCTTTGATCTCCACCAAAAAATCCATTCGCCGAAGTCTATGGTGTGTGATTTGTGTAAATTGGTGTCTCCAACCATTTACGATCTTTATCTTCACAAACGAGAAGCTCACAATCTCTTCACGAAAGTTAATCTCAAATACGTTTGTGACAAATGCGGAAAGTTCTTTTCTAATAGCTGGCAGTGGGAGACACACAAATCTTGCAGATGTAGAAACAGAGACGTTGAAAGTAAATGCAAATACTGTGAAGCTTCATTCTCCACGAATCATAAGCTAAAACGACATTTGAGGAAACATAAGGACGAGATGATGAAAGATCCCGAAGTTGAACCATTCAGATGTGTTTCATGTCCTAAAGTTTTTTATGATGAGGAATTTTATCAAAAACATAGAAACGTCCACGATCCAGAATGCTGGAACAACTTCAAATGCAATGCTTGTGACAGATCTTTTAGAGATGCTGTCAGACTAAAAGAACACGTGAAATCAATACACGAAGGGATAAAGCCACACGCTTGTGATATGTGTGGCAAAACTTTCCACCGTTTGTCCAACATGAAAGTACATCGAGCGTTACATTTTGGTCATAAGTGTACTCACTGTGATCAAGTCTTTGAAAAGGTGCGTCAGTTAGTGACTCACATTCAAGAAGATCATGGTTTGGAGCCACCAGCTAGCTTGACTGCCAGGAAAGGATATGTGAGCGGAACTTACGTTTGCAGATTTTGTGGAAGGACTTTAGCAACTTACCAATCCTTGTTGGATCATGAGCACATTCACACTGGAGAAAAGCCTTATTCTTGTCATATCTGCGATAAAAGTTTCCGAAGCTACACGGCGCGCTGGTCTCATGTGCAAAGACATGAAACGGGAACTTTTATCTGTGAACAATGTGGCAAAAGTTTCAGTTTCAAGCAAAACTTAATGACACATGTGCAAATTCACGTCTCGATGGATGATCGAAAACATCAGTGTCAAGTATGTAAGAAAAAATTCCTTCGAAAGGCGCATTTAAATATTCACATGCGCATTCACGATGGAGTTCGTCCCTATACGTGCGACATTTGCAATTTCAGTTTCACGCAAATCGGCGACATGAGAAGACATCGTGCTAGGCATGAAAATGGAACTGAAATGCGCAAGAGAACGCCACGATATAGAGCCGAGAACATCATGGTCAAATCCGAAAACGCGTCGTGGATTTCTGAAAGCAGCAACGAGGACACTACCTAA
- Protein Sequence
- MDVEALLDERVDSQPFEENIEELCRLCGQVYENSVSIFDNKLSVAEKISRCLPIIVVANDNLPSQICTQCFAYLNISYKLIVNSTKTDTFLRKKLQKSNLAKKNAKNSESDLISNEGTTVVPMKKLKKIAIHGPVTCEFCNLVFEDVNEFDEHFESSHILKWKCNFCDGSYESSDELITHKALMHAGNIIICKACVDEEANTGQKRPKIEEDNSSSGEEREDKFYIPADPGLPQSTESDFNPPDSPSILKSALNPPTEISSDQSFVTPTTSNSKEVESTKSSKMLPATLIVSPALTSKFLYGTTSANKGTAKIVFDSSVDTPELIFSENSESPPSINNSVPLTPSPSTSKLPRNSSVAKLIKSVRFAMNEKVDRIRANERAKTCMSCDVCHLQVDDQKLFDLHQKIHSPKSMVCDLCKLVSPTIYDLYLHKREAHNLFTKVNLKYVCDKCGKFFSNSWQWETHKSCRCRNRDVESKCKYCEASFSTNHKLKRHLRKHKDEMMKDPEVEPFRCVSCPKVFYDEEFYQKHRNVHDPECWNNFKCNACDRSFRDAVRLKEHVKSIHEGIKPHACDMCGKTFHRLSNMKVHRALHFGHKCTHCDQVFEKVRQLVTHIQEDHGLEPPASLTARKGYVSGTYVCRFCGRTLATYQSLLDHEHIHTGEKPYSCHICDKSFRSYTARWSHVQRHETGTFICEQCGKSFSFKQNLMTHVQIHVSMDDRKHQCQVCKKKFLRKAHLNIHMRIHDGVRPYTCDICNFSFTQIGDMRRHRARHENGTEMRKRTPRYRAENIMVKSENASWISESSNEDTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01389672;
- 90% Identity
- iTF_01390547;
- 80% Identity
- -