Basic Information

Insect: Synanthedon tipuliformis
Gene Symbol: stc
Assembly: GCA_947623395.1
Location: OX392416.1:1934762-1944164[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2.2e+04 -4.3 1.6 15 19 465 469 464 469 0.81

2 13 0.14 1.5e+03 -0.4 0.7 4 10 499 505 498 505 0.92

3 13 3.6e-05 0.4 11.0 18.1 4 19 513 528 511 528 0.93

4 13 1.9e-07 0.0021 18.3 14.0 1 19 564 582 564 582 0.97

5 13 0.00023 2.5 8.5 10.4 1 18 623 640 623 641 0.97

6 13 8.1e-06 0.088 13.1 12.3 4 19 689 704 682 704 0.89

7 13 2 2.2e+04 -4.5 2.3 6 10 734 738 733 738 0.88

8 13 0.0024 26 5.2 7.5 1 11 744 754 744 755 0.95

9 13 0.042 4.6e+02 1.2 0.3 4 10 759 765 758 766 0.93

10 13 3.3e-06 0.036 14.4 13.2 3 19 773 789 771 789 0.91

11 13 0.00064 7 7.1 9.0 10 18 836 844 833 845 0.94

12 13 1.4e-08 0.00015 21.9 12.3 1 17 881 899 881 905 0.84

13 13 0.0015 16 5.9 5.6 1 12 911 921 911 921 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2.2e+04	-4.3	1.6	15	19	465	469	464	469	0.81
2	13	0.14	1.5e+03	-0.4	0.7	4	10	499	505	498	505	0.92
3	13	3.6e-05	0.4	11.0	18.1	4	19	513	528	511	528	0.93
4	13	1.9e-07	0.0021	18.3	14.0	1	19	564	582	564	582	0.97
5	13	0.00023	2.5	8.5	10.4	1	18	623	640	623	641	0.97
6	13	8.1e-06	0.088	13.1	12.3	4	19	689	704	682	704	0.89
7	13	2	2.2e+04	-4.5	2.3	6	10	734	738	733	738	0.88
8	13	0.0024	26	5.2	7.5	1	11	744	754	744	755	0.95
9	13	0.042	4.6e+02	1.2	0.3	4	10	759	765	758	766	0.93
10	13	3.3e-06	0.036	14.4	13.2	3	19	773	789	771	789	0.91
11	13	0.00064	7	7.1	9.0	10	18	836	844	833	845	0.94
12	13	1.4e-08	0.00015	21.9	12.3	1	17	881	899	881	905	0.84
13	13	0.0015	16	5.9	5.6	1	12	911	921	911	921	0.96

Sequence Information

Coding Sequence: ATGTCGCAGTGGAACAATACTTTCGGCTACAATAACCAGCACCAGTCTAGCGGTTGGAATGGCGATGTGAATTCTCAATTCATGAATCAACCTTATTATTCAAACAGAGACCCTAACACTCAATATGTTACTTTTAATGAATTTCTTACACAAATGCATAATAATGGGCAAATTCCGCGTAACGTTTCGAACTATGGCAACATTCAGTATCAAAATTACCCCGGAAATCAACAGGCTTACCAGGACATCCCATCTGCTCCACAAAACCAACAACATTATATGTCCAATCCTACTGTGGAAAGAGAGCCACATTCAGCGCAGACATCGACTGAAGATAGTTTCTATAGAAGTGAAATAGTTAGAAGATCTAATCTCACACCGACTGCAACAGAATTTGTCCCAAAACATTCCATTCCAAACCAAACAATAAGTGCACAAAGCATGAGTCTTCCGAAGAATTCTGCTGCAGACAGTGGTTTGGCTGTGCCGTCTACTAGTTATAGTAATATAAAAAGCAAATCGTCGGAAAGGAATTGGAGAGAAAGACCACAAACACAACAATCAGATGGAAAGAATAAATTTAGGCACAGAAGTGAAAGGGAAATGCAAAACCGCAACAGTTACTATCAAGATTCGAGAAATGGGGACGAAAACAATCACGATTCAAATTCTCAAAGTTCTCAGTGGGATTCTAATAACTATAAGGAAGATGCATCAACTTCTAGCCAACAAGAATTTAAGAGTTACAGCCAAGATTCCAACAATAGTTATAACAAGAGTGGAAGTAGTCAGTTCCATAATGAAAATAAATCTAAGGATAGACATAAAAATAATAATCAACAACGTAATCGGGATTCTAGCCACTGGGATGCTGAAGACTTGGAGTCTAACGGTAGCCAATTACTTAACCATGAAAAGATTCCAACAAAATCCAATTCAAAAGCAAAGAACAAAGATGCAGAAAGAACTTTCTACAATAGTTCTATTAATAAAAGTCATGATGCAAGAAATGGGAAAGGAGATCAATCTGGTCGTAGAAATTGGTCAGGAAGTTCACGGTTTCGTGGAGTTGACAGAAACATTACTGAGGAGGAGCAATATGCTAAGAATTATCAAACATATAGAGATGATAAAACTAAAGCGGAGTACACACCTAACAAACCAAAAATTCAAGTAAAACCGAAACCAGACAAAGAAGTATCAAACACTGATCTGACTCAAAGAGATCGGCTTAGTGAACAATTAGACAAGGGCACTTTGGAGTGTCTAGTTTGCTGTGAGCGAGTTAAACAGATTGATTCTGTGTGGTCCTGCGGTAACTGCTACCATGTGTTGCACCTCCGATGTATAAGGAAGTGGGCTTTAACTAGCTTGGTTGAAAACAAATGGCGCTGCCCAGCTTGCCAGAACACTAGTGATGAGGTGCCAAACTACTATAGGTGCTTGTGTGGTGCAGTGCGTTCGCCTGAATATCACCGAGGATATGTAATCGCTCATACTTGTGGCAAGTCTTGTCAAAGGCCTAGGAGTTGTCCCCATCCCTGCACGCTCCTGTGTCATCCGGGACCTTGTCCTCCATGTCAAGCAACAGTTGTGAAGGAATGTGGTTGCGGAAAGGAGAAACGTTCTGTGCTGTGTAGCAGTAAGCTAGCCCAAGTGTGCGGACAAATCTGTGAGCGAACTCTTGAATGCGGTGTTCATAAATGCACTAAAGAGTGTCACGAAGGTCCATGTGAAGATTGCACGGAAACAGTCACTCAAGTGTGCTACTGTCCGCTGGGCAAGAGTAGATCGGTGCAGTGCACTAGGATGACTAGCACATGCGCCGTATGGTCATGCGGTGCGGAGTGTTCGCGCGTGCTAGAGTGCGGCGCGCATGTATGCGCACGGTCCTGCCATGCGCCGCCATGCGATCGCTGCGAGATGTTGCCCGAAGCAGTACTTACATGTCCCTGTGGAAAAACTCGTTTAGCTAAGGGAGAGCGCAAATCTTGCACCGACCCCATTCCCTTGTGCGAAAGCATCTGCTCGAAGCCTCTACCATGTGGAAACGCTGGCGACGGTCACTTTTGTAAAAAAGAGTGTCACAGCGGGATGTGCCCGCCGTGTCCCAAAAAAACTGTCCTGCCGTGTCGTTGCGGTCACACGAGTCGCGAAGTGCCATGTGTTGACCTAGCGGAAATTTTGGACAATGTGGAGTGTCAAAAGAAATGTAATAAGAAACTGTCGTGCGGTCGACACCGTTGCCGCGCGACCTGTTGCGTACTGGCCTCCCACCGCTGCGCTGTGGTTTGCGGCCGTATGCTGTCCTGCCAACTCCATCGCTGCCAGGAGTTCTGCCACACGGGACACTGCGCGCCCTGCTCCACGCTAAGCTTCGAGGAGGTGCGATGCGCGTGCGGCGCTCAGGCGCTGCTGCCGCCGGTGCGATGCGGGGCTCGCGCGCCCGCCTGCAGCGCCCCCTGTCGGCGCACCCGCGCGTGCGCACACAGCCCCCACCACAACTGCCACGCCGGTGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGTTACGGGGGCCACGAGGAGCGCAAGACGATTCCGTGTTCTCAAAAGGAGTTCTCGTGCGGTCTCCCTTGCGGCAAGCCGTTGCCTTGCGGGAAACACACTTGCATCAAAATCTGTCATAAAGGACCCTGCGATACCGCCAAATGTACTCAGCCGTGCAACGAGAAACGTCCGAGTTGCGGGCATCCGTGCGCCGCGCCCTGTCACAGTAGCGAAGCGGCGGAAAGCAGTGCCGCGTCCGACGCGGGCCCCAGCAGTCGCAACACCTGTCCCAGCAGCGCGCCGTGTCGCCGCCTGGTGCGGGCCACGTGTCAGTGCGGTCGGCGGCATGCTGAGAGACCGTGCTTCGAGAACTCCAGGGACTATTCCAAAATGATGAGTGCTCTGGCGGCTACGAAGATTCAGGAAGGTGGCTCTGTTGATTTGTCGGAGGTGCAGCGTCCAAGTGCAATGCTTAAAACGTTGGAATGCGACGACGAATGCCGAGCCGAGGCTCGCTCGCGTGCCCTGGCCCTGGCGCTACAGATCCGGAATCCGGACGTGTCATCCAAGTTGGCGCCGCGGTACAGCGACCACGTGCGCGCCCTGGCGGGTCGCGAACCCGCGTTCGCACAATCGGTCCACGAACGCCTGACCGATCTCGTGCAACTCGCCAAGAAGTCGAAACAGAAGACCCGTTCGCATTCTTTCCCTTCGATGAACCGTCAGAAAAGACAGTTTATACATGAACTGTGCGAGCACTTTGGCTGTGAGAGTGTGGCCTACGACGCAGAACCCAATAGAAACGTCGTTGCCACAGCCGACAAAGAGAAGTCATGGTTGCCGGCGATGTCGGTGCTAGAGGTGTTGGCCCGCGAGGCAGGGAAGCGACGCGTGCCGGGGCCCGTCGTCAGGCCTGCCACTGCCGCACCACCCAAGTGTTCAAGTGGTTGGGCGACGTTGACGTCGACCAATGCGTGGGCGGCTAGAAGTCAGCCGAAGCCCACTCCCACTCCTACGCCCACGCCCACTCCCACGCCAGAGGCGCCCAAGATAGACTACTTCGACAACCCGCCCGACAACTAG
Protein Sequence: MSQWNNTFGYNNQHQSSGWNGDVNSQFMNQPYYSNRDPNTQYVTFNEFLTQMHNNGQIPRNVSNYGNIQYQNYPGNQQAYQDIPSAPQNQQHYMSNPTVEREPHSAQTSTEDSFYRSEIVRRSNLTPTATEFVPKHSIPNQTISAQSMSLPKNSAADSGLAVPSTSYSNIKSKSSERNWRERPQTQQSDGKNKFRHRSEREMQNRNSYYQDSRNGDENNHDSNSQSSQWDSNNYKEDASTSSQQEFKSYSQDSNNSYNKSGSSQFHNENKSKDRHKNNNQQRNRDSSHWDAEDLESNGSQLLNHEKIPTKSNSKAKNKDAERTFYNSSINKSHDARNGKGDQSGRRNWSGSSRFRGVDRNITEEEQYAKNYQTYRDDKTKAEYTPNKPKIQVKPKPDKEVSNTDLTQRDRLSEQLDKGTLECLVCCERVKQIDSVWSCGNCYHVLHLRCIRKWALTSLVENKWRCPACQNTSDEVPNYYRCLCGAVRSPEYHRGYVIAHTCGKSCQRPRSCPHPCTLLCHPGPCPPCQATVVKECGCGKEKRSVLCSSKLAQVCGQICERTLECGVHKCTKECHEGPCEDCTETVTQVCYCPLGKSRSVQCTRMTSTCAVWSCGAECSRVLECGAHVCARSCHAPPCDRCEMLPEAVLTCPCGKTRLAKGERKSCTDPIPLCESICSKPLPCGNAGDGHFCKKECHSGMCPPCPKKTVLPCRCGHTSREVPCVDLAEILDNVECQKKCNKKLSCGRHRCRATCCVLASHRCAVVCGRMLSCQLHRCQEFCHTGHCAPCSTLSFEEVRCACGAQALLPPVRCGARAPACSAPCRRTRACAHSPHHNCHAGDCPPCVVLTTKRCYGGHEERKTIPCSQKEFSCGLPCGKPLPCGKHTCIKICHKGPCDTAKCTQPCNEKRPSCGHPCAAPCHSSEAAESSAASDAGPSSRNTCPSSAPCRRLVRATCQCGRRHAERPCFENSRDYSKMMSALAATKIQEGGSVDLSEVQRPSAMLKTLECDDECRAEARSRALALALQIRNPDVSSKLAPRYSDHVRALAGREPAFAQSVHERLTDLVQLAKKSKQKTRSHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVVRPATAAPPKCSSGWATLTSTNAWAARSQPKPTPTPTPTPTPTPEAPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01388150; iTF_01387308;
90% Identity: iTF_01388150; iTF_01387308;
80% Identity: -