Basic Information

Insect: Synanthedon formicaeformis
Gene Symbol: stc
Assembly: GCA_945859765.1
Location: CAMAON010000210.1:590541-600837[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 2.1e+04 -4.3 1.6 15 19 467 471 466 471 0.81

2 14 0.14 1.5e+03 -0.4 0.7 4 10 501 507 500 507 0.92

3 14 3.7e-05 0.39 11.0 18.1 4 19 515 530 513 530 0.93

4 14 2e-07 0.0021 18.3 14.0 1 19 566 584 566 584 0.97

5 14 0.94 1e+04 -3.1 0.3 8 11 589 592 588 592 0.86

6 14 0.0001 1.1 9.6 9.0 1 18 625 642 625 643 0.97

7 14 3.3e-05 0.35 11.2 13.3 4 19 691 706 684 706 0.91

8 14 2 2.1e+04 -4.5 2.3 6 10 736 740 735 740 0.88

9 14 0.0024 25 5.2 7.5 1 11 746 756 746 757 0.95

10 14 0.042 4.5e+02 1.2 0.3 4 10 761 767 760 768 0.93

11 14 3.3e-06 0.035 14.4 13.2 3 19 775 791 773 791 0.91

12 14 0.00065 6.8 7.0 9.0 10 18 838 846 835 847 0.94

13 14 1.4e-08 0.00015 21.9 12.3 1 17 883 901 883 907 0.84

14 14 0.0009 9.5 6.6 4.9 1 12 913 923 913 924 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	2.1e+04	-4.3	1.6	15	19	467	471	466	471	0.81
2	14	0.14	1.5e+03	-0.4	0.7	4	10	501	507	500	507	0.92
3	14	3.7e-05	0.39	11.0	18.1	4	19	515	530	513	530	0.93
4	14	2e-07	0.0021	18.3	14.0	1	19	566	584	566	584	0.97
5	14	0.94	1e+04	-3.1	0.3	8	11	589	592	588	592	0.86
6	14	0.0001	1.1	9.6	9.0	1	18	625	642	625	643	0.97
7	14	3.3e-05	0.35	11.2	13.3	4	19	691	706	684	706	0.91
8	14	2	2.1e+04	-4.5	2.3	6	10	736	740	735	740	0.88
9	14	0.0024	25	5.2	7.5	1	11	746	756	746	757	0.95
10	14	0.042	4.5e+02	1.2	0.3	4	10	761	767	760	768	0.93
11	14	3.3e-06	0.035	14.4	13.2	3	19	775	791	773	791	0.91
12	14	0.00065	6.8	7.0	9.0	10	18	838	846	835	847	0.94
13	14	1.4e-08	0.00015	21.9	12.3	1	17	883	901	883	907	0.84
14	14	0.0009	9.5	6.6	4.9	1	12	913	923	913	924	0.96

Sequence Information

Coding Sequence: ATGTCGCAGTGGAACAATACTTTCGGCTACAATAACCAGCATCAGTCTAGCGGTTGGAACGGCGATATGAATTCTCAATTCATGAATCAATCTTATTATTCAAACAGAGACCCTAACACTCAATATGTTACTTTTAATGAATTTCTTACACAAATGCATAATAATGGGCAAATTCAGCGTAACGTTCCGAACTATGGCAACATTCAATATCAAAATTACCCCGGAAACCAACAGGCTTACCAGGGCATGCCATCTGCTCCACAAAACCAACCACATTATATATCCAATGCCACTGTGGAAGGAGAGCCACATTCAGCGCAGACATCGACTGAAGATAGTTTCTATAGAAGTGAAATAGTTAGAAGATCTAATCTCACACCTACTGCAACAGAATTTGTCCCAAAACATTCCATTCCAAACCAAACGGTAAGTGCACAAAACATGAGTCTTCCGGAGAATTCTGCTGCCGACAGTGGATTGGCTGAACCGTCTACTAGTTATGGAAGTATAAAAAGCAAATCGTCGGAAAGGAATTGGAGAGAAAGACCACAAACACAACAGTTAGATGGAAAGAATAAATTTAGACACAGAAGTGAAAGAGAATCTCAAAACCGCAACAGTTACTATCAAGATTCTAGAAATTGGGAGGAAAATAATCATGGTTCAAACTCTCAAAGTTCTCAATGGGATTCTAATAACTATAAGGAAGATTCATCAACTTCTAGCCATCAAGAATTTAAGAGTTACAACCAGGATTCCAACAATGGTTATAACAAGAGTGGCAGTAGTCAGTTCCATAATAGCAATGAAAATAAATCAAAAGATAGGCATAAAAATAATAATCAACAACGTAATAGGGATTTTAGCCACTGGGATGCTGAGGGCTTGGAGTCTAACGGTAGCCAATTATTTAACCATGAAAAGATTCCAACAAAATCCAATTCAAAAGCAAAGAACAAAGATGCAGAAAGAACTTTCTACAATAGTTCTATTAATAAAAGTCATGATGCAAGAAATGGGAAAGGAGATCAATCTGGTCGTAGAAATTGGTCAGGAAGCTCTCGGTTTCGTGGTGTTGAAAGAAACATTACTGAGGAGGAGCAATATGCTAAGAATTATCAAACATATAGAGATGATAAAACTAAAGCGGAGTACACACCTAATAGACCAAAAAGTCAAGTCAAACCGAAACCAGACAAAGAGGTATCAAACACTGATCTGACTCAAAGAGATCGGCTCAGTGAGCAATTAGACAAGGGTTCTTTGGAGTGTCTAGTTTGCTGTGAGCGAGTTAAACAGATTGATTCTGTTTGGTCCTGCGGTAACTGCTACCATGTGTTGCACCTGCGATGTATAAGGAAATGGGCTATGACTAGCTTGGTTGAAAACAAATGGCGCTGCCCAGCTTGCCAGAACACAAGTGATGAGGTACCAAACGAATACAGGTGCTTGTGTGGTGCTGTGCGTTCGCCCGAATATCACCGAGGATATGTGATCGCTCACACTTGTGGCAAGTCTTGTAAGAGGCCCAGGAGTTGTCCCCATCCCTGCACGCTCCTGTGTCATCCAGGACCTTGCCCTCCATGTCAAGCGACAGTTGTTAAGGAATGCGGTTGCGGAAAGGAGAAACGTTCCGTTCTGTGTAGCAGTAAGCTAGCTCAAGTGTGCGGACAAATCTGTGAGCGAACTCTTGAATGCGGTGTTCATAAATGCACTAAAGAGTGTCACGAAGGTCCATGTGAAGATTGCACGGAAACAGTCACTCAAGTGTGCCACTGTCCGCTGGGCAAGAGTAGATCCGTGGAGTGCACTAAGGTGACGAGCAAATGCGCCTCATGGTCATGCGGTGCGGAGTGCTCGCGCGTGCTGGAGTGCGGCGCACATGTATGCGCACGGGCCTGCCATGCGCCGCCATGCGATCGCTGCGCGATGTTGCCCGAAGCAGTACTTACATGTCCCTGTGGGAAGACTCGTTTAGCTAAGGGAGAGCGCAAATCTTGCACCGACCCTATTCCCTTGTGCGAAAGCATCTGCGCGAAACCTCTAAAATGTGGACCCGACGGCGACGGTCACTTTTGTAAAAAAGATTGTCATAGCGGGCTGTGCCCGCCGTGTCCTGAAAAAACGGTCCTGCCTTGTCGCTGCGGTCACTCGAGCCGCGAAGTGCCCTGTGTTGACCTACCGGAGCTTTTGAACAATGTGGAGTGTCAAAAGAAATGTAATAAGAAACTGTCGTGCGGCCGACACCGTTGCCGCGCGACGTGTTGCGTGGCGGCCTCCCACCGCTGCGCTGTGGTTTGCGGCCGCATGCTGTCCTGCCAACTCCATCGCTGCCAGGAGTTCTGCCACACGGGACACTGCGCGCCCTGCTCCACGCTAAGCTTCGAGGAGGTGCGTTGCGCGTGCGGTGCTCAAGCGTTGTTGCCCCCAGTGCGGTGCGGCGCTCGCGCGCCCGCCTGCAGCGCCCCATGTCGTCGCACCCGTGCGTGTGCACACAGCCCGCATCACAACTGCCACGCCGGCGACTGTCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCTACGGGGGCCACGAGGAGCGCAAGACGATTCCGTGTTCTCAAAAGGAGTTCTCATGCGGTCTCCCTTGCGGCAAGCCGTTGCCTTGCGGGAAGCACACTTGTATCAAAATCTGTCATAAAGGACCCTGCGATACCGCCAAATGTACTCAGCCGTGCAACGAGAAACGTCCGAGTTGCGGGCATCCGTGCGCCGCGCCCTGTCACAGTAGCGAAGCGGGGGAAAGCAGTACCGTGTCCGACGCGGGCCCCAGCAGTCGCAGCAACTGTCCCAGCAGCGCGCCGTGTCGCCGCCTGGTGCGGGCCACGTGTCAGTGCGGTCGGCGGCATGCCGAGAGACCGTGCTTCGAGAACTCCAGGGACTATTCCAAAATGATGAGTGCTCTGGCTGCTACGAAGATTCAGGAAGGTGGCTCTGTGGATTTGTCGGAGGTGCAGCGTCCAAGTGCAATGCTTAAAACGTTGGAATGCGACGACGAATGCCGAGCCGAGGCTCGCTCGCGTGCGCTGGCCCTGGCGCTACAGATCCGGAATCCGGACGTGTCGTCCAAGTTGGCGCCGCGGTACAGCGACCACGTGCGCGCCCTGGCGGGACGCGAACCCGCGTTCGCACAAACGGTCCACGAACGCCTGACCGACCTCGTGCAGCTAGCCAAGAAGTCTAAACAGAAGACCCGTTCACATTCTTTCCCATCGATGAACCGCCAGAAAAGACAGTTTATACATGAACTGTGCGAGCACTTTGGCTGTGAGAGTGTGGCCTACGACGCAGAACCCAATAGAAACGTCGTTGCCACAGCCGACAAAGAGAAGTCATGGTTGCCAGCGATGTCGGTGCTAGAGGTGTTAGCCCGCGAGGCGGGGAAGCGACGCGTGCCGGGGCCCGTCGTCAGGCCTGCCACTGCCGCACCACCCAAGTGTTCAAGTGGTTGGGCGACGTTGACGTCGACCAATGCGTGGGCGGCCAGAAGTCAGCCGAAGCCCACTCCTACGCCCACGCCCACTCCCACGCCCACTCCCACGCCCACGCCCATGCCAGACGCGCCCAAGATAGACTACTTCGATAACCCGCCCGACAACTAG
Protein Sequence: MSQWNNTFGYNNQHQSSGWNGDMNSQFMNQSYYSNRDPNTQYVTFNEFLTQMHNNGQIQRNVPNYGNIQYQNYPGNQQAYQGMPSAPQNQPHYISNATVEGEPHSAQTSTEDSFYRSEIVRRSNLTPTATEFVPKHSIPNQTVSAQNMSLPENSAADSGLAEPSTSYGSIKSKSSERNWRERPQTQQLDGKNKFRHRSERESQNRNSYYQDSRNWEENNHGSNSQSSQWDSNNYKEDSSTSSHQEFKSYNQDSNNGYNKSGSSQFHNSNENKSKDRHKNNNQQRNRDFSHWDAEGLESNGSQLFNHEKIPTKSNSKAKNKDAERTFYNSSINKSHDARNGKGDQSGRRNWSGSSRFRGVERNITEEEQYAKNYQTYRDDKTKAEYTPNRPKSQVKPKPDKEVSNTDLTQRDRLSEQLDKGSLECLVCCERVKQIDSVWSCGNCYHVLHLRCIRKWAMTSLVENKWRCPACQNTSDEVPNEYRCLCGAVRSPEYHRGYVIAHTCGKSCKRPRSCPHPCTLLCHPGPCPPCQATVVKECGCGKEKRSVLCSSKLAQVCGQICERTLECGVHKCTKECHEGPCEDCTETVTQVCHCPLGKSRSVECTKVTSKCASWSCGAECSRVLECGAHVCARACHAPPCDRCAMLPEAVLTCPCGKTRLAKGERKSCTDPIPLCESICAKPLKCGPDGDGHFCKKDCHSGLCPPCPEKTVLPCRCGHSSREVPCVDLPELLNNVECQKKCNKKLSCGRHRCRATCCVAASHRCAVVCGRMLSCQLHRCQEFCHTGHCAPCSTLSFEEVRCACGAQALLPPVRCGARAPACSAPCRRTRACAHSPHHNCHAGDCPPCVVLTTKRCYGGHEERKTIPCSQKEFSCGLPCGKPLPCGKHTCIKICHKGPCDTAKCTQPCNEKRPSCGHPCAAPCHSSEAGESSTVSDAGPSSRSNCPSSAPCRRLVRATCQCGRRHAERPCFENSRDYSKMMSALAATKIQEGGSVDLSEVQRPSAMLKTLECDDECRAEARSRALALALQIRNPDVSSKLAPRYSDHVRALAGREPAFAQTVHERLTDLVQLAKKSKQKTRSHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVVRPATAAPPKCSSGWATLTSTNAWAARSQPKPTPTPTPTPTPTPTPTPMPDAPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01389107;
90% Identity: iTF_01389107;
80% Identity: -