Basic Information

Insect: Synanthedon myopaeformis
Gene Symbol: stc_1
Assembly: GCA_944738625.1
Location: CALYFO010000889.1:61536-70844[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2.1e+04 -4.3 1.6 15 19 467 471 466 471 0.81

2 13 0.14 1.5e+03 -0.4 0.7 4 10 501 507 500 507 0.92

3 13 3.7e-05 0.38 11.0 18.1 4 19 515 530 513 530 0.93

4 13 2e-07 0.002 18.3 14.0 1 19 566 584 566 584 0.97

5 13 0.0001 1.1 9.6 9.0 1 18 625 642 625 643 0.97

6 13 7e-06 0.072 13.3 12.0 1 19 684 706 684 706 0.88

7 13 2 2.1e+04 -4.5 2.3 6 10 736 740 735 740 0.88

8 13 0.0024 24 5.2 7.5 1 11 746 756 746 757 0.95

9 13 0.042 4.3e+02 1.2 0.3 4 10 761 767 760 768 0.93

10 13 3.3e-06 0.034 14.4 13.2 3 19 775 791 773 791 0.91

11 13 0.00065 6.6 7.0 9.0 10 18 838 846 835 847 0.94

12 13 1.4e-08 0.00015 21.9 12.3 1 17 883 901 883 907 0.84

13 13 0.0015 15 5.9 5.6 1 12 913 923 913 923 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2.1e+04	-4.3	1.6	15	19	467	471	466	471	0.81
2	13	0.14	1.5e+03	-0.4	0.7	4	10	501	507	500	507	0.92
3	13	3.7e-05	0.38	11.0	18.1	4	19	515	530	513	530	0.93
4	13	2e-07	0.002	18.3	14.0	1	19	566	584	566	584	0.97
5	13	0.0001	1.1	9.6	9.0	1	18	625	642	625	643	0.97
6	13	7e-06	0.072	13.3	12.0	1	19	684	706	684	706	0.88
7	13	2	2.1e+04	-4.5	2.3	6	10	736	740	735	740	0.88
8	13	0.0024	24	5.2	7.5	1	11	746	756	746	757	0.95
9	13	0.042	4.3e+02	1.2	0.3	4	10	761	767	760	768	0.93
10	13	3.3e-06	0.034	14.4	13.2	3	19	775	791	773	791	0.91
11	13	0.00065	6.6	7.0	9.0	10	18	838	846	835	847	0.94
12	13	1.4e-08	0.00015	21.9	12.3	1	17	883	901	883	907	0.84
13	13	0.0015	15	5.9	5.6	1	12	913	923	913	923	0.96

Sequence Information

Coding Sequence: ATGTCGCAGTGGAACAATACTTTCGGCTACAATAATCAGCACCAATCTAGCGGTTGGAATGGCGATATGAATTCTCAATTCATGAATCAATCTTATTATTCAAACAGAGACCCTAACACTCAATATGTTACTTTTAATGAATTTCTTACACAAATGCATAATAATGGGCAAATTCCGCGTAACGTTTCGAACTATGGCAACATTCAATATCAAAATTACCCCGGAAACCAACAGGCTTACCAGGGCATGCCATCTGCTCCACAAAACCAACCACATTATATATCCAATGCCACTGTGGAAAGAGAGCCACATTCAGCACAGACATCGACTGAAGATAGTTTTTATAGAAGTGAAATAGTTAGAAAATCTAATCTTACACCGACTGCAACAGAATTTGTCCCAAAACATTCCATTCCAAGCCAAACAGTAAGTGCACAAAGCATGAGTCTTCCGGAGAATTCTGCTGCAGACAGTGGATTGGCTGAACCGTCTACTAGTTATAGAAATATACAAAGCAAATCGTCAGAAAGGAATTGGAGAGAAAGACCACAAACACAACAGTTCGATGGAAAGAATAAATTTAGGCACAGAAGTGAAAGGGAATCGCAAAACCGCAATAGTTACTATCAAGATTCTAGAAATTGGGAGGAAAATAATCACAATACAAATTCTCAAAGTTCTCAATGGGATTCTAATAACTATAAGGAAGATCCATCAAGTTCTAGCCAACAAGAATTCAAGAGTTACAACCAGGATTCCAACAATAGTTACAGCAAGAGTGGTAGTAGTCAGTTCCATAATAGCAATGAAAATAAATCAAAAGATAGACATAAAAATAATAATCAACAACGTAATAGGGATTCTAGTCACTGGGATGCTGAGGGCTTGGAGTCTAACGGTAGCCAATTACTTAACCATGAAAAGGTTCCAACAAAATCCAATTCAAAAGCAAAGAACAAAGATGCAGAAAGAACTTTTTATAATAGTTCGATGAATAAAAATCAAGATGCCAGAAATGGGAAAGGAGATCAATCTGGTCGTAGAAATTGGTCAGGAAGTTCACGGTTTCGTGGAGTTGAAAGAAACATTACTGAGGAGGAGCAATATGCTAAGAATTATCAAACATATAGAGATGATAAAACTAAAGCAGAGTACACACCTAACAAACCAAAAAGTCAAGTCAAACCGAAACCAGACATAGAAATATCTAACCCTGATCTGACTCAAAGAGATCGGCTTAGTGAACAATTAGACAAGGGTTCTTTGGAGTGTCTAGTTTGCTGTGAGCGAGTTAAACAGATTGATTCTGTGTGGTCCTGCGGTAACTGCTACCATGTGCTGCACCTGCGATGTATAAGAAAATGGGCTATGACTAGCTTGGTTGAAAACAAATGGCGCTGCCCAGCTTGCCAGAACACAAGTGATGAGGTGCCAAGCGAATACAGGTGCTTGTGTGGTGCTGTGCGTTCGCCCGAATATCACCGAGGATATGTGATCGCTCACACTTGTGGCAAGTCTTGTAAGAGGCCCAGGAGTTGTCCCCATCCCTGCACGCTCCTGTGTCATCCGGGACCTTGCCCTCCATGTCAAGCGACAGTTGTTAAGGAATGTGGTTGCGGAAAGGAGAAACGTTCTGTTCTGTGTAGCAGTAAGCTAGCTCAAGTGTGCGGACAAATCTGTGAGCAAACTCTTGAATGCGGTGTTCATAAATGCACTAAAGAGTGTCACGAAGGTCCATGCGAAGATTGCACGGAAACAGTCATTCAAGTGTGCTACTGTCCGCTGGGCAAGAGTAGATCCGTGGAATGCACAAAGGTGACGAGCACATGCGCCGCATGGTCATGCGGTGCGGAGTGCTCGCGCGTGCTAGAGTGCGGCGCGCATGTATGCGCACGGGCCTGCCATGCGCCGCCATGCGATCGCTGCGCGATGTTGCCCGAAGCAGTGCTGACATGTCCCTGTGGGAAGACTCGTTTAGCTAAGGGAGAGCGCAAATCTTGTACTGACCCCATTCCCTTGTGCGAAAGCATCTGCGCGAAGCCTCTACAATGTGGTCCCGCTGGCGACAGGCACTTTTGTAAAAAAGATTGTCATAGCGGGATGTGCCCGCCGTGTCCTGAAAAAACGGTCCTGCCGTGTCGTTGCGGTCACACGAGCCGCGAAGTGCCCTGTGTTGACCTACCGGAGATTTTGAACAATGTGGAATGTCAAAAGAAATGTAATAAGAAACTGTCGTGCGGTCGACACCGTTGCCGCGCGACCTGTTGCGTGGCGACCTCCCACCGCTGCGCTGTGGTTTGCGGCCGTATGCTGTCCTGCCAACTCCATCGCTGCCAGGAGTTCTGCCACACGGGACACTGCGCGCCCTGCTCCACGCTAAGCTTCGAGGAGGTGCGCTGCGCGTGCGGCGCTCAAGCGTTGCTGCCCCCGGTGCGATGCGGGGCTCGCGCGCCCGCCTGCAGCGCCCCCTGTCGGCGCACCCGCGCGTGCGCCCACAGCCCGCACCACAACTGCCACGCCGGCGACTGCCCGCCTTGCGTCGTGCTCACCACTAAGCGCTGCTACGGGGGCCACGAGGAGCGCAAAACGATTCCGTGCTCTCAAAAGGAGTTCTCGTGCGGTCTACCTTGCGGCAAGCCGTTGCCTTGCGGGAAACACACGTGCATCAAAATCTGTCATAAAGGACCCTGCGATACCGCCAAATGTACGCAGCCGTGCAACGAGAAACGTCCGAGCTGCGGGCATCCGTGCGCCGCGCCCTGTCACAGTAGCGAAGCGGCGGAAAGCAGTACCGCGTCCGTCGCGGGCCCCAGCGGTCGCAGCAACTGTCCCAGCAGCGCGCCGTGTCGCCGGCTGGTGCGGGCCACGTGTCAGTGCGGCCGGCGGCACACCGAGAGATCCTGCTTCGAGAACTCCAGGGACTATTCCAAAATGATGAGTGCTCTGGCGGCTACGAAGATTCAGGAAGGTGGTTCTGTGGATTTGTCGGAGGTGCAGCGTCCAAGTGCAATGCTTAAAACGTTGGAATGCGACGACGAATGCCGAGCCGAGGCTCGCTCGCGTGCGCTGGCCCTGGCGCTACAGATCCGGAATCCGGACGTGTCGTCCAAGTTGGCGCCGCGGTACAGCGACCACGTGCGCGCCCTGGCGGGACGCGAACCCGCGTTCGCACAAACGGTCCACGAACGCCTGACCGATCTCGTGCAGCTCGCCAAGAAGTCGAAACAGAAGACCCGTTCGCATTCTTTCCCATCGATGAACCGTCAGAAAAGACAGTTCATACATGAACTGTGCGAGCACTTTGGCTGCGAGAGTGTTGCTTACGACGCAGAGCCCAACAGAAACGTCGTTGCCACCGCCGACAAGGAAAAGTCATGGTTGCCGGCGATGTCGGTGCTAGAGGTGTTGGCTCGCGAGGCAGGGAAGCGACGCGTGCCGGGGCCCGTCGTCAGGCCTGCCACTGCCGCACCACCCAAGTGTTCAAGTGGTTGGGCGACGTTGACGTCGACCAATGCGTGGGCGGCTAGAAGTCAGCCGAAGCCCACTCCCACGCCCACGCCCACTCCTACGCCCACGCCCACTCCCACGCCAGAGGCGCCCAAGATAGACTACTTCGACAACCCGCCCGACAACTAG
Protein Sequence: MSQWNNTFGYNNQHQSSGWNGDMNSQFMNQSYYSNRDPNTQYVTFNEFLTQMHNNGQIPRNVSNYGNIQYQNYPGNQQAYQGMPSAPQNQPHYISNATVEREPHSAQTSTEDSFYRSEIVRKSNLTPTATEFVPKHSIPSQTVSAQSMSLPENSAADSGLAEPSTSYRNIQSKSSERNWRERPQTQQFDGKNKFRHRSERESQNRNSYYQDSRNWEENNHNTNSQSSQWDSNNYKEDPSSSSQQEFKSYNQDSNNSYSKSGSSQFHNSNENKSKDRHKNNNQQRNRDSSHWDAEGLESNGSQLLNHEKVPTKSNSKAKNKDAERTFYNSSMNKNQDARNGKGDQSGRRNWSGSSRFRGVERNITEEEQYAKNYQTYRDDKTKAEYTPNKPKSQVKPKPDIEISNPDLTQRDRLSEQLDKGSLECLVCCERVKQIDSVWSCGNCYHVLHLRCIRKWAMTSLVENKWRCPACQNTSDEVPSEYRCLCGAVRSPEYHRGYVIAHTCGKSCKRPRSCPHPCTLLCHPGPCPPCQATVVKECGCGKEKRSVLCSSKLAQVCGQICEQTLECGVHKCTKECHEGPCEDCTETVIQVCYCPLGKSRSVECTKVTSTCAAWSCGAECSRVLECGAHVCARACHAPPCDRCAMLPEAVLTCPCGKTRLAKGERKSCTDPIPLCESICAKPLQCGPAGDRHFCKKDCHSGMCPPCPEKTVLPCRCGHTSREVPCVDLPEILNNVECQKKCNKKLSCGRHRCRATCCVATSHRCAVVCGRMLSCQLHRCQEFCHTGHCAPCSTLSFEEVRCACGAQALLPPVRCGARAPACSAPCRRTRACAHSPHHNCHAGDCPPCVVLTTKRCYGGHEERKTIPCSQKEFSCGLPCGKPLPCGKHTCIKICHKGPCDTAKCTQPCNEKRPSCGHPCAAPCHSSEAAESSTASVAGPSGRSNCPSSAPCRRLVRATCQCGRRHTERSCFENSRDYSKMMSALAATKIQEGGSVDLSEVQRPSAMLKTLECDDECRAEARSRALALALQIRNPDVSSKLAPRYSDHVRALAGREPAFAQTVHERLTDLVQLAKKSKQKTRSHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVVRPATAAPPKCSSGWATLTSTNAWAARSQPKPTPTPTPTPTPTPTPTPEAPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01389107;
90% Identity: iTF_01389107;
80% Identity: -