Stip018192.1
Basic Information
- Insect
- Synanthedon tipuliformis
- Gene Symbol
- pnr
- Assembly
- GCA_947623395.1
- Location
- OX392411.1:12115804-12120790[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-18 1.7e-14 53.4 4.0 1 35 68 101 68 102 0.97 2 2 6.4e-18 1.7e-14 53.3 6.3 1 34 122 154 122 156 0.98
Sequence Information
- Coding Sequence
- ATGGACATATCGCAGCTGTCGCCGTGGTGGCGAAACATGGCAATATTGACAGGAGGCGGCAGCGTGGGCAGTGTTGGCTCCGTGGCCGGTGGGCTGTATGGACAGAACGTGGTCATGGGCTCTTGGTGCGCGCCTTACGATGCTCTGCAACGACCACCTGCTTACGATGGCGCGATGGAGGTGTACGAGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCAACACGACGCCGCTGTGGCGCCGGGACTCGACGGGCCACTACCTGTGCAACGCGTGCGGCCTCTACCACAAGATCAACGGCGTCAACCGGCCGCTGGTGAAGCCGTCGAAGCGGCTGTCGAACGCGCGACGCCACGGACAATGTTGCACCAACTGCGGGTCGCGCAACACGACGCTGTGGCGACGCAACAACGAGGGCGAGCCCGTCTGCAACGCCTGCGGACTCTACTACAAGCTGCACGGAATCAACAGACCTCTGGCAATGAGAAAAGACGGCATTCAGACGAGGAAACGGAAGCCAAAGAAGAGTGCGAACGGCTGCAAACAGAACACAGAAGGCTCCAAAAAGGAAGGAACGTGTTCACCCGCTGCAGAAGGGAGTACGGACAGCAAACCCAGCCTTTCGGAAGTGGGTATGCCTCTCGCACACTCGGTGGCGCACGGAGCGAAGGCGCGCACGGAGACGCAGCCGACGCCCGAGGCGTCGCCACACGGCCACGCGCACGCGCACGGCTCGCACGGGCACGCGTCGCATTCGCATGCGCACGCGCAGTACCCGCTCGCGCCCGCCTTCCTGTCGAACCCGTCGCTGTTCAACATAAAGAGCGAGCCGGCGCACGGGTACGACGCATACCCGGCGCACGGGTCGCACTACCACTCGCAGCAGCAGTACCTGCACGCGCTGCAGTACGGGCTGGCCAACGGCGACGAGGAGGAGGGCAGCGGCTTCCTGCATCAGCGCAACGTCACCGCACACGCCAAGCTCATGGCCTCTACGTAG
- Protein Sequence
- MDISQLSPWWRNMAILTGGGSVGSVGSVAGGLYGQNVVMGSWCAPYDALQRPPAYDGAMEVYEEGRECVNCGANTTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSNARRHGQCCTNCGSRNTTLWRRNNEGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSANGCKQNTEGSKKEGTCSPAAEGSTDSKPSLSEVGMPLAHSVAHGAKARTETQPTPEASPHGHAHAHGSHGHASHSHAHAQYPLAPAFLSNPSLFNIKSEPAHGYDAYPAHGSHYHSQQQYLHALQYGLANGDEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01386390; iTF_01388134; iTF_01387295;
- 90% Identity
- iTF_01387295; iTF_01388134; iTF_01386390;
- 80% Identity
- -