Sand001736.1
Basic Information
- Insect
- Synanthedon andrenaeformis
- Gene Symbol
- pnr
- Assembly
- GCA_936447275.2
- Location
- CAKZFQ020000093.1:531565-540005[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.3e-18 2.2e-14 53.1 4.0 1 35 117 150 117 151 0.97 2 2 9.7e-18 2.3e-14 53.1 6.3 1 34 171 203 171 205 0.98
Sequence Information
- Coding Sequence
- ATGTTCGGCGGCAACGGGGGAGCTGTGAGCGGCGCGAGCGGCGGCTACGGCAACGCCGGCGCTGAATGCGCGGAGGGCTACGGGCTGGGCTACATGGCGGGCGGCGGCAGGCTGCAGCAGTACGCGGCCCACTTCGCGCCCCACCAGAACGTCTGGCACCACCATCACGCAGCGCACCACGATGGCTACGGAGGCGGTAGCGTGGGCAGCGTGGGCTCCGTGGGCTCCGTGGCCGGTGGGCTGTATGGACAGAACGTGGTGATGGGCTCCTGGTGCGCGCCTTACGATGCCCTGCAACGACCACCTGCTTACGATGGCGCGATGGAGGTGTACGAGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCAACACGACGCCGCTGTGGCGACGGGACTCCACGGGCCACTACCTGTGCAACGCGTGCGGCCTCTACCACAAGATCAACGGCGTCAACCGGCCGCTGGTGAAGCCGTCGAAGCGGCTGTCGAACGCGCGACGCCACGGCCAATGTTGCACCAACTGCGGGTCGCGCAACACGACGCTGTGGCGACGCAACAACGAGGGCGAGCCCGTCTGCAACGCCTGCGGACTCTACTACAAGCTGCACGGAATCAACAGACCTCTGGCAATGAGAAAAGATGGCATTCAAACGAGGAAGCGGAAGCCAAAGAAGAGCGCGAACGGCTGCAAACAGAGCTCAGAAGGCTCCAAAAAGGAAGGAACGTGTTCGCCCGCCGCAGAAGGGAGTACGGACAGCAAGCCCAGCCTTTCGGAAGTGGGCATGCCTCTCGCACACTCGATGGCGCACGGAGCGAAGGCGCGCACGGAGACGCAGCCGACGCCCGAGGCGTCGCCGCACGGCCACGCGCACTCGCACGGCTCGCACGGGGCGCACGGGCACGCGGCGCACGCGCACGCGCACTCGCAGTACCCGCTCGCGCCCGCCTTCCTGTCGAACCCGTCGCTGTTCAACATAAAGAGCGAGCCGGCGCACGGCTACGACGCGTACCCGGCGCACGGCTCGCACTACCACTCGCAGCAGCAGTACCTGCACGCGCTGCAGTACGGGCTGGCCAACGGCGACGAGGAGGAGGGCAGCGGCTTCCTGCATCAGCGCAACGTCACCGCGCACGCCAAGCTCATGGCCTCCACGTAG
- Protein Sequence
- MFGGNGGAVSGASGGYGNAGAECAEGYGLGYMAGGGRLQQYAAHFAPHQNVWHHHHAAHHDGYGGGSVGSVGSVGSVAGGLYGQNVVMGSWCAPYDALQRPPAYDGAMEVYEEGRECVNCGANTTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSNARRHGQCCTNCGSRNTTLWRRNNEGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSANGCKQSSEGSKKEGTCSPAAEGSTDSKPSLSEVGMPLAHSMAHGAKARTETQPTPEASPHGHAHSHGSHGAHGHAAHAHAHSQYPLAPAFLSNPSLFNIKSEPAHGYDAYPAHGSHYHSQQQYLHALQYGLANGDEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01389091;
- 90% Identity
- iTF_01389091;
- 80% Identity
- -