Sfor016145.1
Basic Information
- Insect
- Synanthedon formicaeformis
- Gene Symbol
- pnr
- Assembly
- GCA_945859765.1
- Location
- CAMAON010000142.1:448237-456304[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-18 1.9e-14 53.2 4.0 1 35 114 147 114 148 0.97 2 2 7.6e-18 2e-14 53.1 6.3 1 34 168 200 168 202 0.98
Sequence Information
- Coding Sequence
- ATGTTCGGAGGCAACGGAGGAGCTGTGAGCGGCGCGAGCGGCGGTTACGGCAACGCCGGGGCCGAATGCTCGGAGGGCTACGGGCTGGGCTACATGGCGGGCGGCGGCAGGCTCCAGCAGTACGCGGCCCACTTTGCGCCCCACCAGAACGTCTGGCACCACCACCACGCAGCGCACCACGAAGGCTACGGTGGCGGTAGCGTGGGCAGCGTGGGCTCCGTGGCCGGCGGTCTGTATGGACAGAACGTGGTCATGGGCTCCTGGTGCGCGCCTTACGATGCCCTGCAACGACCACCTGCTTACGATGGCGCGATGGAGGTGTACGAGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCAACACGACGCCGCTATGGCGACGGGACTCGACGGGCCACTACCTGTGCAACGCGTGCGGCCTCTACCACAAGATCAACGGCGTCAACCGGCCGCTGGTGAAGCCGTCGAAGCGGCTGTCGAACGCGCGACGCCACGGCCAATGTTGCACTAACTGCGGGTCGCGCAACACGACGCTGTGGCGACGCAACAACGAGGGCGAACCCGTCTGCAACGCCTGCGGACTTTACTACAAGCTGCACGGGATCAACAGACCTCTGGCAATGAGAAAGGACGGCATTCAGACGAGGAAGCGGAAGCCAAAGAAGAGCGCGAACGGCTGCAAACAGAACACAGAAGGTTCCAAAAAGGAAGGAACGTGTTCACCCGCCGCAGAAGGGAGTACGGACAGCAAGCCCAGCCTTTCGGAAGTGGGCATGCCTCTCGCGCACTCGATGGCGCACGGAGCGAAGGCGCGCACGGAGACGCAGCCGACCCCCGAGGCGTCGCCGCATGGCCACGCGCACTCGCACGGCTCGCACGGGCACGCGTCGCACGCGCACGCGCACGCGCAGTACCCGCTCGCGCCCGCCTTCCTGTCGAACCCGTCGCTGTTCAATATAAAGAGCGAGCCGGCGCACGGTTACGACGCGTACCCGGCGCACGGCTCGCACTACCACTCGCAGCAGCAGTACCTGCACGCGCTGCAGTACGGGCTGGCCAACGGCGACGAGGAGGAGGGCAGCGGCTTCCTGCATCAGCGCAACGTAACCGCGCACGCCAAGCTCATGGCTTCCACGTAG
- Protein Sequence
- MFGGNGGAVSGASGGYGNAGAECSEGYGLGYMAGGGRLQQYAAHFAPHQNVWHHHHAAHHEGYGGGSVGSVGSVAGGLYGQNVVMGSWCAPYDALQRPPAYDGAMEVYEEGRECVNCGANTTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSNARRHGQCCTNCGSRNTTLWRRNNEGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSANGCKQNTEGSKKEGTCSPAAEGSTDSKPSLSEVGMPLAHSMAHGAKARTETQPTPEASPHGHAHSHGSHGHASHAHAHAQYPLAPAFLSNPSLFNIKSEPAHGYDAYPAHGSHYHSQQQYLHALQYGLANGDEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01389091;
- 90% Identity
- iTF_01389091;
- 80% Identity
- -