Stip010120.1
Basic Information
- Insect
- Synanthedon tipuliformis
- Gene Symbol
- Dmrt2
- Assembly
- GCA_947623395.1
- Location
- OX392407.1:2854377-2858804[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-26 3.4e-22 78.3 11.4 1 47 21 67 21 67 0.99 2 2 1.3 6.8e+03 -2.7 0.1 34 41 124 131 122 134 0.74
Sequence Information
- Coding Sequence
- ATGCGGAAAGAACGTAGCGATGCAGGAGAGACTGCGAACAGTGACACAAGGAAGTCACTGAGGACACCGAAATGCGCACGCTGTCGAAATCACGGCGTTATCTCTTGTCTTAAGGGACACAAGAAGTTGTGCCGTTGGCGGGATTGTCGGTGCCCTGGATGCTTGCTGGTTCTGGAGAGGCAACGAGTCATGGCTGCTCAGGTCGCTTTACGGAGACAGCAAGGAGCAGGTTCGGAGCCTCGCGGGGAAGCGGTGACGTTAGCAGCTCGCAAGAGAGCTTACCGCGCGCGTTTGCGATGCATGCAGATGGCGAATGACTATCATTTGCAAGCACCTTTCTTTGAGATGAAACTTAGCGATCCTGCTTGGTGCGAACGCGTTCGGCGACGCAAGGCATTTGCGGATGTGGAGTTGGAACGGGGGAATCCCCCACCACCTGCACTGGTGGCGCCATCTTCGCACTCCGCAGCGTTTTGTACCCACTTTTTGGCCGCGCTTCTTACCAACTGCACACCTTTGCCTCCACCCCAGCAGCCTCCGTCAAGGAAACTGTCATTTTCTATCGAATCCATAATAGGGGTACAGTGA
- Protein Sequence
- MRKERSDAGETANSDTRKSLRTPKCARCRNHGVISCLKGHKKLCRWRDCRCPGCLLVLERQRVMAAQVALRRQQGAGSEPRGEAVTLAARKRAYRARLRCMQMANDYHLQAPFFEMKLSDPAWCERVRRRKAFADVELERGNPPPPALVAPSSHSAAFCTHFLAALLTNCTPLPPPQQPPSRKLSFSIESIIGVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01387643; iTF_01386751;
- 90% Identity
- iTF_01387643; iTF_01386751;
- 80% Identity
- -