Smyo009851.1
Basic Information
- Insect
- Synanthedon myopaeformis
- Gene Symbol
- Dmrt2
- Assembly
- GCA_944738625.1
- Location
- CALYFO010000552.1:79477-84568[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-26 3.2e-22 78.3 11.4 1 47 18 64 18 64 0.99 2 2 0.92 6.3e+03 -2.7 0.1 34 41 121 128 119 131 0.74
Sequence Information
- Coding Sequence
- ATGCGGAATGAACGTAGCGAGACTGCGAACAATGACACGAGGAAGTCACTGCGGACACCGAAATGCGCACGCTGTCGAAATCACGGCGTGATTTCTTGTCTGAAGGGACACAAGAAGTTGTGCCGTTGGCGGGATTGTCGGTGCCCTGGATGCTTGCTGGTTCTGGAGAGGCAACGAGTCATGGCTGCTCAGGTCGCCTTACGGAGACAGCAAGGAGCAGGATCGGAGCCTCGCGGGGAAGCGGTGACGTTAGCAGCTCGCAAGAGAGCTTACCGCGCTCGTTTGCGATGCATGCAGATGGCGAATGACTATCATTTGCAAGCACCTTTCTTTGGCATGAAATTAAGCGATCCGGCTTGGTGCGAACGCGTTCGGCGACGCAAGGCATTTGCGGATGTGGAATTGGAACGGGGGAATCCCCCGCCACCTGCACTCGCGGCGCCATCTACGCACTCCGCAGCGTTTTGTACCCACTTTTTGGCCGCGCTTCTTACCAACTGCACGCCTTTGCCTCCACCCCAGCAGCCTCCATCCAGGAAACTGTCATTTTCTATCGAATCCATTATAGGGGTACAGTGA
- Protein Sequence
- MRNERSETANNDTRKSLRTPKCARCRNHGVISCLKGHKKLCRWRDCRCPGCLLVLERQRVMAAQVALRRQQGAGSEPRGEAVTLAARKRAYRARLRCMQMANDYHLQAPFFGMKLSDPAWCERVRRRKAFADVELERGNPPPPALAAPSTHSAAFCTHFLAALLTNCTPLPPPQQPPSRKLSFSIESIIGVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01388514;
- 90% Identity
- iTF_01388514;
- 80% Identity
- -