Basic Information

Insect: Synanthedon myopaeformis
Gene Symbol: -
Assembly: GCA_944738625.1
Location: CALYFO010001271.1:64132-74015[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0096 0.56 11.0 0.6 3 23 586 607 585 607 0.96

2 23 0.06 3.5 8.5 0.3 1 21 978 998 978 999 0.96

3 23 6.9 4e+02 2.0 0.3 1 22 1041 1062 1041 1064 0.82

4 23 0.0058 0.34 11.7 0.5 3 21 1075 1093 1073 1094 0.95

5 23 1.5 87 4.1 0.0 3 23 1103 1124 1101 1124 0.88

6 23 0.018 1.1 10.1 0.2 3 23 1145 1166 1143 1166 0.96

7 23 0.0019 0.11 13.1 2.5 1 23 1172 1195 1172 1195 0.95

8 23 0.13 7.5 7.4 0.0 1 23 1221 1244 1221 1244 0.90

9 23 0.019 1.1 10.0 3.4 1 23 1249 1271 1249 1271 0.97

10 23 0.0089 0.52 11.1 0.2 1 23 1277 1300 1277 1300 0.95

11 23 0.0024 0.14 12.9 1.3 1 23 1313 1335 1313 1335 0.97

12 23 0.00018 0.011 16.4 1.8 1 23 1384 1407 1384 1407 0.97

13 23 0.0013 0.073 13.8 1.0 1 23 1467 1490 1467 1490 0.96

14 23 0.00096 0.056 14.1 2.0 2 23 1513 1535 1512 1535 0.95

15 23 0.028 1.7 9.5 0.1 2 23 1541 1563 1540 1563 0.94

16 23 0.013 0.76 10.6 0.2 1 21 1608 1628 1608 1629 0.95

17 23 0.0013 0.074 13.7 0.6 1 23 1639 1661 1639 1661 0.93

18 23 9.1e-05 0.0053 17.3 0.3 2 23 1752 1774 1752 1774 0.93

19 23 3.4e-07 2e-05 25.0 1.4 3 23 1781 1801 1780 1801 0.98

20 23 0.011 0.66 10.8 0.4 1 23 1820 1842 1820 1843 0.95

21 23 0.041 2.4 9.0 0.0 1 23 1864 1886 1864 1886 0.98

22 23 0.014 0.79 10.5 1.0 1 23 1892 1915 1892 1915 0.95

23 23 0.00032 0.019 15.6 0.7 1 23 1923 1946 1923 1946 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0096	0.56	11.0	0.6	3	23	586	607	585	607	0.96
2	23	0.06	3.5	8.5	0.3	1	21	978	998	978	999	0.96
3	23	6.9	4e+02	2.0	0.3	1	22	1041	1062	1041	1064	0.82
4	23	0.0058	0.34	11.7	0.5	3	21	1075	1093	1073	1094	0.95
5	23	1.5	87	4.1	0.0	3	23	1103	1124	1101	1124	0.88
6	23	0.018	1.1	10.1	0.2	3	23	1145	1166	1143	1166	0.96
7	23	0.0019	0.11	13.1	2.5	1	23	1172	1195	1172	1195	0.95
8	23	0.13	7.5	7.4	0.0	1	23	1221	1244	1221	1244	0.90
9	23	0.019	1.1	10.0	3.4	1	23	1249	1271	1249	1271	0.97
10	23	0.0089	0.52	11.1	0.2	1	23	1277	1300	1277	1300	0.95
11	23	0.0024	0.14	12.9	1.3	1	23	1313	1335	1313	1335	0.97
12	23	0.00018	0.011	16.4	1.8	1	23	1384	1407	1384	1407	0.97
13	23	0.0013	0.073	13.8	1.0	1	23	1467	1490	1467	1490	0.96
14	23	0.00096	0.056	14.1	2.0	2	23	1513	1535	1512	1535	0.95
15	23	0.028	1.7	9.5	0.1	2	23	1541	1563	1540	1563	0.94
16	23	0.013	0.76	10.6	0.2	1	21	1608	1628	1608	1629	0.95
17	23	0.0013	0.074	13.7	0.6	1	23	1639	1661	1639	1661	0.93
18	23	9.1e-05	0.0053	17.3	0.3	2	23	1752	1774	1752	1774	0.93
19	23	3.4e-07	2e-05	25.0	1.4	3	23	1781	1801	1780	1801	0.98
20	23	0.011	0.66	10.8	0.4	1	23	1820	1842	1820	1843	0.95
21	23	0.041	2.4	9.0	0.0	1	23	1864	1886	1864	1886	0.98
22	23	0.014	0.79	10.5	1.0	1	23	1892	1915	1892	1915	0.95
23	23	0.00032	0.019	15.6	0.7	1	23	1923	1946	1923	1946	0.96

Sequence Information

Coding Sequence: ATGAATGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTAGAGGCGAATTACTGCCGATTTTCCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTCGAAAATCAAGGATTGCGTCTCTGTTGAGATTAACGAGAATGACGACCTTCCGACAAATGTCTGCAAGAAATGCATGGACAATGTCAATAACTGGCACATATTTAAGTCAGTGTGTGTGAAGGCCCAAAACAAACTAGAATCTTTTGTAAAAGATGGCAGCCAACTAGAAGAGGTGAAGATAAAAAATGAACCTTTATCAGATGAGGCTTATGATGATGGAGTAGTTATTGATGGATCATATCCTGACATTGAGAATAGTGGGAGCAAATTGCAGCCTGAAGGCCCACCAATCTTGGCTTCGTTAGGGCTTACACCGAGGAGTGATAAGAAATTAGATCCTCGTATGGATTGGCATCGAGTGCATGCAATATTGGATATAGTTCAAGACGATGATGTAATCGATTCACTGCAAAACACAGAGGAGTTTGACGACCTGCAACATTCCGATCACAACTCGGACACAGAAGGTGATTTGCAGTCGGACATTGATGAGGAATTTGTGGACTCCAAAGATGGTTATATGTGCAAAAATGGACGACTTATGGCGAAATTCTTAAATACAGATATGACAAAAAACTTACAAAGAGAGTGCGAATCTGTTGTAAATTTGAAAAAGAGGAAGTTGACCTCAAAAAGTTGTCCCCGACCGAGATTTGCATGGCAAATGTTTTTCACAGAGGATCTCTTGAATCATATTGTCAAATCAACAAACGCAAATATATCATCTAGCGTCATGAATGTTCCCGAATTGAAGACTTTGATAGGCATTTTGTATTTCCATGGCATTATGAGACCGACTCATACCAAACTCTGTGACCTTTGGCATAGTGATTACGGATTCAACTGTGTCATCGAGTCTATGAAGTATGATAGATTTAAGTTTTTACTTCGAAACATTCGTTTCAGTCAAGAGAATGACGATAGTGTTATACAGTCTGACGTTATGAAGCGAATGCGTAAAGTGTTTGAAATATTTGCTTTGAATTGTAGAACAGCTTTCAACGTAGATAGAATAGCTGTCATCGATGAGATCATTGTGCCGGTTTACGGGCCTTGTCCGTTCCGATACAATATTGATAGAAAGCCTACAAAGTCTGGCATTAAGTTGGCACTCCTAGTGGACCCGTCTAATTTCTACATAAGTAATGTTGATGTAATTGTGGACCGTTATTTCGGTGTTGAAGATGTGACAAAAAAAATGGTTCAACATTTGCAAGGTTCATGGAGAACAGTCCTAATGGACAGTTGGTTTACGTCCTTAAAATTGCTGGAAACATTGAAAACCGAACACAGTTTGTTTAGCGTAGCCGCAGTCAAACCGACCGAAGAGTTTTTACCGCCAACGTTTTTTTCCCAATTTCGAAAACCTCAATCAGTTATGACTGGATATCTAAACGATGAATGTATTTTATCGTCGTATGTTACATCTCAATCGAAATCAATTAATGTAGTGACAAATGACCCGGATTATGGTGCAGAAAGTGACAAAGAAGAAGAAGAAGAAGAGGATGAAGAGATGAACGAAGCTGGTGACCAGTACCCCCCTGTCGCGAACATGCCTGAGGTATCGATAACAGTGATGCGACCCACCGGAGAGACCTTACAGTCTCGACAGGGAATACAACAGCTCGCATCTAAAGATTGTCTCGTATGTGGACGAGCGTACAGATACTCCCATAATGCTAGACGACACGAATTGACTGCCCACAGTTTTGATAGGTATACAAACAAAATTAAACCCAAAAAAGAGAATCCACATGTAATGCTACCAAAACTTAGACCGAATCCATTTAATCCTAAAGCGCGAATGATGCCCAACCCCATTAGCCACAAAATGCAATTTATGCCCAAGAATGTACCTATTAAACAAATGCCAAGAGTTGTTATCCCACCGAAACCTGTACCTATTAGGACTAAACCACACAACAATTTACCATATCCTCTTCGAATAAAGGCTTTAAAGGATTTGCAAATTAAGAAGAAGGAGCCAGAAATATTGAAAACTCTTTTAACCACTAAACCGGAAGTACTCGTTTCCGAACCGGAGATAATAAATTCTGGTCCCGAAAGCCCCGAAACATTGATTTCAGAGCCAGAAATTGCATCGTTTCAAGTGGAAGCCATACTTTCTGAGCCCGATGTTTACGATCAACAGCAAGGCGACCAAGAAAACGGGGAAAATTTGGACAATAATCAAGGGCACAATTATGATACTGTCGATATGGATTCTGATAATGAAATTGAAATTGCAAGGCAACGAGAGAACGAGGACAATGTAGACGAGAACAATATGGGTCGAGACGGTGAAGGGAATTCCATAGAAATCAATGAAAATAATATTGAAGGTCAACAAAGCGATAAAGACGAGGACGAGGAAATGGGTGATAGTCAGGACGGTGTGGCCGAATCCAAAGAAGATGAAAATAAAAATGGCGAAACATATGACGATCAAGAACAGCAACAAGGGGACAACGACGAAGAATATGACGACGACCTCCCACCTATGGACATAACACCTGTTGTTGAAATCAATGAGGATATGCAGACGAACTCATTTAATAGTGAATTGAATGAAGACGATGAAGATTTAGACATATCGGCCGAAGCTAACGATACCGTTGACGGTGAAGAGAATGACGCGAAAGATCTCGATCCGGACAAAGTTTATGTTACGAAAACACAGAGAGATTTTATTAATAAGTATCGCGATATAATAGAGCAAATAAACACCAAACGGTGTCTCTGTTGCGACAGGGAACACCCTCGAAGGAAAGCGGTGATCCAACATCTGCAGAAAAATGGTCATAAGGTACCGAAACATACGTGTTACAATTGTGTCGTTACATTTAGCCATATTGGTGCACTGCTAAGTCATATGAGAGCAAATGTTTGCACGGATTTGTGGAAGATTATATTTGACGAAAATGGTATTACCGATGACATGGTTATAGAAGATGAACCAAAAGATGCTAAAGTTCAATATAAAGACATTTTTAATGCTCGTTCTTATGCTTGTAAACTATGCCCTGCCAAATTCCAACTTAAACAATTTATTATGAAGCATGTTTTGGATGTCCACGAGGATGGACAGTCTATGGTGCCGATGGCGTGTGTCCATTGCGGTTCTAGGTTCAAAGACAAGGCCATGTGGAAGAAACATATCCGCAATGGCGAGTGTACGGTTTACATAGCGTGCGATTTGTGTCCTGAAAAATTTATCAGCATGCAAGATTTCAGCGAGCACGCCTTAGCCACACACGCTGGTAATTTCGAACAAAATGAAAATCAGAATAAATGTGTTGACGGAAGACCGACAGATTGCCCTCTGTGCGGGAAGAAGAACAGTAGCTACCCAAACTTAGTGAAACATTTGAAGATTATACACAACGAAGAGAAACCTCATTACTGTCAACACTGTGATTCTAAGTTCGAACAAGCCGCTGACCTGAACAAACACATTTATATGGAGCACTCTGACCGCGTTTTGGGCTTACAAACCGCCGAACCTGATATGAGTATAGTCAAGGAAGAGACTGAAGAATATCACTACTCGTGCACCGAGTGCAATGCTATATTCGAAACGGTCGACGCTTGGACCGATCATCAGGTCGCCGAACATAACCAGGTTGCACATCACTGCGATCAATGCGAGAAAAAGTTCTTGCGGCCATCTGAACTCGCCGAGCATAAGAATACGCACTTGCGTGTCAAGTTCTATCCGTGTAGTGTTTGTCCAAACTCGTATAGCACTCCGCAGAAATTGTCTGAGCACGTCCAACAAAGTCACCCCGGAGCGGCTTCATACGCTGCAGCCGATTCGGAATTCTTTTGTGACATCTGCATTCGATCGTTTAAGAGTCGCCAGGCTTATTCCAATCATATGCGTATACACGCTAAAGTGCCCACCACTAATAGGAAACCGGGAGATCCAAAAGGATTCTCCCCGCAGATCATCGGAAAGCCTATTAGACAATTTCCGCAAATTGTACCCGGTTTTCCCTCGTTTAAACCAAATTGTAATGTTCCTAACGCACCTTATTCGTGCGATATATGCGGAAAAGGTTTTATGCACAAGAAAAATATATGGAAGCACAAAAAGGTGTTGCACGCTGATATTATTAATGATAGGAACGATAGTGAGGAGAACACTATGCACGCTTCCACCGAAGAGGACGAGTACAATGTCGATGAAAATGGAATCGCTTTATCCACGCCACAGTTCAATAGTTTTAACTTTTCAAGTTTTACCAACAACACACCCATTCAACAGCCAGACCCGATGCCGTACGTCTGCGATCTTTGCAGCAAGCGTTTCCCACTGAGAACCAGTTTGTGGAAACATAAACGAGCTAAACACGGAATAATCAATCCCGGAGGCGAGCCGCAGTCGGCCGGAGCCGGTAGCGGCGGCAGTAGTAGATCGAGTTGCACTATATGTAAAATTTCGTTCTCAGACAAGAAATCTTATTATCGCCACAGAAAGAACGTGCACAAATCGTCTACACAGATGTGTAAAATATGTGGAAAACCGTTGAGCACCACCCTCGAACTGTACGAGCACTTGAAAGCGGCTCACGCCAGAGAGTTGCTCGGCTATAACGCCAATCAAGGGTCGTCCAGTAGACCGCAAACGATTACGCAAGACTTGGATCCCGATTACGAAGCCGAAATGGATGCGACCGATCCCGCAGCGGAGTACCAAGCGCGGTACCCTTGCGATACGTGCGGCAAACAGTTTGTCGGACTACTCGCATTGCAAAACCATCAATGTCTCAATCAGAATTCGTCCGATCCGCAAACGTTTGATTGCGAAATTTGCCACAAGAGTTACACATCGATTGCCGCATTAAAGAGCCACCGCGGTTGGCATTTGAGATCTCCGGACGGCAAAGCGGCCGCTAACAATTCAGGTCTGTGGATGCCACAACACAAGGTGACCAGTAAGGTCAGCAAATACGAAGTGGTCGATGCGGTGCAACTAGCCCGCGTACAGCACTCCACTCCAGCGGCGACCGTGGCCAAAAGGCGTTTACCGCCAGAAGTCGAAGTGACAGTTGTCAATCCGAACAAAAAATTACGCTCGGACGACTCGATGGAAATCGAACAGCAAAGCAACTTATCGGGCACCACAGAGGACAGATATTGCAATATATGCGACAAGGAGTTCACTAAGCGCGCGGCTTACCAGCGTCACATGGACGAAGTGCATCAACCGAATTCGGTTTTTTGTCCGGTGTGCGATAAGAGTTTTACGCGGAAATCTACTCTACTAGTTCACATGAAGAAGCATTACGAGGGAGGAGAGGGCAGTTCGGGGACTGCCGGACAAGTGGACGATGATAATTTTTCGTGCGATCTTTGCGACGCTCAGTACAATAGTGAGGCCGGGTTGAGGGCTCACCGCGAAAGGCATCACGGCGACGAATCTGGTGAATCTGAGGACGAGGGCATAGCGAATATATTGCCTCCTGGCGAGTTCACTTGCACGCAGTGCGGTGACGGTGTAGCGACACCGCGAGACCTCATCGCTCACCGTTCCATGCACGCGACACCCACAAAGTTCTTCTGCAACATATGCAAGGTGTACTTCACTAGGGCACTAGATCTCTCGTCGCACACGCGCGCGCGACACGCCGACAACGAGAAGGTTTTCTTCCCTTGTGCCATGTGCGATCGTTTCTACATGAACAAGAAGAGTTTGCAGCGACACATTGAGATGTCTCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIKDCVSVEINENDDLPTNVCKKCMDNVNNWHIFKSVCVKAQNKLESFVKDGSQLEEVKIKNEPLSDEAYDDGVVIDGSYPDIENSGSKLQPEGPPILASLGLTPRSDKKLDPRMDWHRVHAILDIVQDDDVIDSLQNTEEFDDLQHSDHNSDTEGDLQSDIDEEFVDSKDGYMCKNGRLMAKFLNTDMTKNLQRECESVVNLKKRKLTSKSCPRPRFAWQMFFTEDLLNHIVKSTNANISSSVMNVPELKTLIGILYFHGIMRPTHTKLCDLWHSDYGFNCVIESMKYDRFKFLLRNIRFSQENDDSVIQSDVMKRMRKVFEIFALNCRTAFNVDRIAVIDEIIVPVYGPCPFRYNIDRKPTKSGIKLALLVDPSNFYISNVDVIVDRYFGVEDVTKKMVQHLQGSWRTVLMDSWFTSLKLLETLKTEHSLFSVAAVKPTEEFLPPTFFSQFRKPQSVMTGYLNDECILSSYVTSQSKSINVVTNDPDYGAESDKEEEEEEDEEMNEAGDQYPPVANMPEVSITVMRPTGETLQSRQGIQQLASKDCLVCGRAYRYSHNARRHELTAHSFDRYTNKIKPKKENPHVMLPKLRPNPFNPKARMMPNPISHKMQFMPKNVPIKQMPRVVIPPKPVPIRTKPHNNLPYPLRIKALKDLQIKKKEPEILKTLLTTKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDVYDQQQGDQENGENLDNNQGHNYDTVDMDSDNEIEIARQRENEDNVDENNMGRDGEGNSIEINENNIEGQQSDKDEDEEMGDSQDGVAESKEDENKNGETYDDQEQQQGDNDEEYDDDLPPMDITPVVEINEDMQTNSFNSELNEDDEDLDISAEANDTVDGEENDAKDLDPDKVYVTKTQRDFINKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFSHIGALLSHMRANVCTDLWKIIFDENGITDDMVIEDEPKDAKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSMVPMACVHCGSRFKDKAMWKKHIRNGECTVYIACDLCPEKFISMQDFSEHALATHAGNFEQNENQNKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHNEEKPHYCQHCDSKFEQAADLNKHIYMEHSDRVLGLQTAEPDMSIVKEETEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGAASYAAADSEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFSPQIIGKPIRQFPQIVPGFPSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDEYNVDENGIALSTPQFNSFNFSSFTNNTPIQQPDPMPYVCDLCSKRFPLRTSLWKHKRAKHGIINPGGEPQSAGAGSGGSSRSSCTICKISFSDKKSYYRHRKNVHKSSTQMCKICGKPLSTTLELYEHLKAAHARELLGYNANQGSSSRPQTITQDLDPDYEAEMDATDPAAEYQARYPCDTCGKQFVGLLALQNHQCLNQNSSDPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKYEVVDAVQLARVQHSTPAATVAKRRLPPEVEVTVVNPNKKLRSDDSMEIEQQSNLSGTTEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGSSGTAGQVDDDNFSCDLCDAQYNSEAGLRAHRERHHGDESGESEDEGIANILPPGEFTCTQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFTRALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01386941;
90% Identity: iTF_01386941; iTF_01388734;
80% Identity: -