Smyo009522.1
Basic Information
- Insect
- Synanthedon myopaeformis
- Gene Symbol
- dl
- Assembly
- GCA_944738625.1
- Location
- CALYFO010000530.1:189046-211982[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.4e-71 4.8e-67 225.3 0.0 1 169 88 258 88 258 0.98
Sequence Information
- Coding Sequence
- ATGTCGTCTATCATGATGCTCGAGGGAATTGTTGGTGAAGTGCTCGCGTTACCCAAGTTCTGGATCCAGGATTATTCTGTAGTTTTGATAAAAAAGGAAAAACGGAGTAAGGCGACCAGGAAATTGACCATTAAGGGGGCAGATGGCATTCCTAACGAAGAGAATGACAACACCGAAGTAAATATTAGTGATGTCCTTGAGGCCATATCGAGCACGGACCCGGAGAGGTCTATGGACGCGATGCATCGACACGAGCGACGCGTCAACATTGTAGAGCAGCCGGCGAGCAAAGCTCTCAGGTTTCGTTATGAGTGCGAGGGTAGGTCGGCGGGTTCGATCCCCGGCGTGAACAGTACTCCCGAGAAGAAGACGTATCCAACAATCGAGATCGTCGGCTGGACCGGCAAGGCTGTTGTCGTCGTCTCCTGTGTTACCAAAGATAAGCCATACAGGCCTCACCCCCACAACCTGGTGGGTCGGGAACAATGCAAGAAGGGTCTGTGCACAGTGTACGTGGACGGAGCGGACAACAAAGTCACCTTCAACAATTTGGGCATCCAATGTGTCCGACGTCGGGACATCGCCGAAGCGCTCAAACTGCGCCAAGAGCAGAATGTGGACCCATTCAAAACCGGCTTCGACCACAAGAACCAACCGCAAAGCATCGACCTGAACGCGGTGCGACTTTGCTTCCAAGTGTTTCTGTTCGACGAGCGATCGCAGTCGTTCCGACACGGACTCGCGCCCGTCGTCTCCGACATCATCTACGACAAGAAGGCCATGAGCGATCTGCTCATCATGAGGATGAGCAGTTGCTCCGGCACCGCCAAGGGCGGCACAGAGCTCATTTTGCTCTGTGAGAAGGTGATTCGCGAGGAGACGGCCGTCGTGTTCTACGAGACGGACGGCGACCGTCGCGTGTGGGAGGCCAGCGCTCACATAATCCTGGTGCACAAGCAGGTCGCCATCGCGGTCACCACTCCGCCCTACCGCCGCCCGGACACCGACCGTCACGCCCGAGTGCACATCCAACTGCGACGCACGACCGACGGCGCCTGCAGCCCACCGGTCGACTTCGAGTACCTGCCCGAGCTCCTAGCAGGTACTGCCAGGAAACCGCTGCCCGACCTCGCGGCGCTCACTCTGCTGCTAAGGGACACCAACAACAACACGGACAAACCGACCGACCACTGCGACTCCTCTCCCATCCCCGTCCACTCCCCGTCTCCGTCAGTCGACGTCGTAGACGCCGTAGACGCCGTAGACGCTGTAGACGCTGTAGACGTAGACGTCGTAGACGCGGTAGACGTAGTACTGGAAGACGTCCAAGTGCTCGAAGATTCCAACGAACGCACGCTGGACGACTTACTAGATCAAGTCGCGGAACTCGATGAGATATACACGGAGAACCGCACGCGGTTGGAAAACGCGTCCGACGACCGCAACCGCGACGTCGATGCGGACGCGGAGGATTTCAACGACGCCGGCACTTATACTAGTCTCCAGCTCGCGTTCAAAAATCCCATACGCATTGAGGAACCGGACACCGCGGCTTACGAGGACGTGCAGGTGCAAACTTATCGCGGACCCATTATAGAATTTTCGCCCTTGAAACGCGACGACGAAGAGGCACCGCCTTTGCCGCCGAAACGCGTACGGAAAGCTCCGTCCGTCGAAGGCTTCAAGACCAGTCAGACATCCGTGGACAGTTTCTTGAAGCCGGGCCGTCAATTGCCAATAACTCGCACGCCGGAACCGCGCACGGAGCTTTGCGGCGCTCGCAGTGAACCCGCGTTGCCGCCGGCGCCTAAAAAGCGCTCGTTTTTCTCGCGGTTGTTCCGCAGACGAGACAAATCGCCGGCGCCCAGTGTTAAATCCGAGGGCAGGAAAGAGAAGAAGTCGAAGCCGGTGGGTCGGTCCGTGAGTAGCGTGTCGGGCGTCCGTCCGTCAAAGTTCAAGTCGTCGGTCTCGCACGCGTCCTTGAAGGATAACGCGTCTGGAGCGGGACTGAGCTATGCGGACAGCGTGACGCACATTTCCCTGCACGGGGAAGCGGACGAAGTGGGTCGCTCCGCGTCGCAGAATTCTCTGCGGCGCGGAGCGAGCGTAGGTCCGCTTCCGCCGACCGACGGCGGAACTATTCTCGTCGCGGAGAGCGTGTTGGCGTTAGACGCATCAGCGTTCCGCAAGCTCCAAGACGACCTGGAACTGACCGATGCGGAACACTACGCGTTGTACATGGCGGTGGCTCCGCACGCGACCGCCTCGGAGTTCGACGAAACCAGCTGCTACTATTCGCCCGTCGATGGCAGTAAATTCAATAACTAA
- Protein Sequence
- MSSIMMLEGIVGEVLALPKFWIQDYSVVLIKKEKRSKATRKLTIKGADGIPNEENDNTEVNISDVLEAISSTDPERSMDAMHRHERRVNIVEQPASKALRFRYECEGRSAGSIPGVNSTPEKKTYPTIEIVGWTGKAVVVVSCVTKDKPYRPHPHNLVGREQCKKGLCTVYVDGADNKVTFNNLGIQCVRRRDIAEALKLRQEQNVDPFKTGFDHKNQPQSIDLNAVRLCFQVFLFDERSQSFRHGLAPVVSDIIYDKKAMSDLLIMRMSSCSGTAKGGTELILLCEKVIREETAVVFYETDGDRRVWEASAHIILVHKQVAIAVTTPPYRRPDTDRHARVHIQLRRTTDGACSPPVDFEYLPELLAGTARKPLPDLAALTLLLRDTNNNTDKPTDHCDSSPIPVHSPSPSVDVVDAVDAVDAVDAVDVDVVDAVDVVLEDVQVLEDSNERTLDDLLDQVAELDEIYTENRTRLENASDDRNRDVDADAEDFNDAGTYTSLQLAFKNPIRIEEPDTAAYEDVQVQTYRGPIIEFSPLKRDDEEAPPLPPKRVRKAPSVEGFKTSQTSVDSFLKPGRQLPITRTPEPRTELCGARSEPALPPAPKKRSFFSRLFRRRDKSPAPSVKSEGRKEKKSKPVGRSVSSVSGVRPSKFKSSVSHASLKDNASGAGLSYADSVTHISLHGEADEVGRSASQNSLRRGASVGPLPPTDGGTILVAESVLALDASAFRKLQDDLELTDAEHYALYMAVAPHATASEFDETSCYYSPVDGSKFNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01385480;
- 90% Identity
- iTF_01386490;
- 80% Identity
- -