Sand001273.1
Basic Information
- Insect
- Synanthedon andrenaeformis
- Gene Symbol
- dl
- Assembly
- GCA_936447275.2
- Location
- CAKZFQ020000054.1:495397-509453[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.33 1.5e+03 -0.6 0.0 126 152 43 68 22 80 0.68 2 2 1.2e-70 5.6e-67 225.3 0.0 1 169 110 280 110 280 0.98
Sequence Information
- Coding Sequence
- ATGCTCGAAGGGTTTGTTGGTGAAGTGCTCGCGTTACCCAAGTTCTGGATCCAGGATTATTCTGTAGTTTTGATAAAAAATGAAAAACGGAGTAAACCGACTAGGAAATTGGCAGATGGCATTCCTAGTGAAGAGAATGACAACACCGAAGTAAATATTAGTGATGTCCGGTACTGTATAATGTATATGTTATGTGAGAATAGGACATACAGGGGAGAGATAAAGAAGATCTACGATTTAGAAGTGTTTGTCTCGTTGACAGTTGAGGCCATATCGAGCACGGACCCGGAGAGGTCTATGGACGCGATGCATCGCCACGAGCGACGCGTCAACATTGTAGAGCAGCCGGCGAGCAAAGCTCTCAGGTTTCGTTATGAGTGCGAGGGTAGGTCGGCGGGTTCGATCCCCGGCGTGAACAGTACTCCCGAGAAGAAGACGTATCCAACAATCGAGATTGTCGGTTGGACCGGCAAGGCTGTTGTGGTCGTCTCCTGTGTTACCAAAGATAAGCCATACAGGCCTCACCCCCACAACCTGGTGGGTCGGGAACAATGCAAGAAGGGTCTGTGCACCGTGTACGTGGACGGAGCGGACAACAAAGTCACCTTCAACAACTTGGGCATCCAATGTGTCCGGCGTCGGGACATCGCCGAGGCGCTCAAGCTGCGTCAAGAGCAGAATGTGGACCCTTTCAAAACCGGCTTCGACCACAAGAACCAACCGCAAAGTATCGACCTGAACGCGGTGCGACTTTGCTTCCAAGTGTTCCTGTTCGACGAGCGATCGCAGTCGTTCCGACACGGCCTCGCGCCCGTCGTCTCCGACATCATCTACGACAAGAAGGCCATGAGCGATCTGCTCATCATGAGGATGAGCAGTTGCTCCGGCACCGCCAAGGGCGGCACAGAGCTCATTTTGCTCTGTGAGAAGGTGATCCGCGAGGAGACGGCCGTCGTGTTTTACGAGACGGATGGCGATCGGCGCGTGTGGGAGGCCAGCGCGCACATAATCCTGGTGCACAAGCAGGTCGCCATCGCGGTCACCACTCCGCCCTACCGCCGCCCCGACACCGACCGACACGCCCGAGTGCACATCCAACTGCGACGCACCACCGACGGCGCCTGCAGCCCCCCAGTCGACTTCGAGTACCTGCCCGAGCTGTTAGCAGGTACTGCCAGGAAACCGCTGCCCGACCTCGCGGCGCTCACTCTGCTGCTAAAGGACACCAACAACAACACGGCCAAACCGACCGACCACTGCGACTCCTCTCCAATCTCCGTCCACTCCCCGTCTCCGTCAGTCGACGTCGTAGAAGCGGTAGACGTAGTACTGGAAGACGTCCAAGTGCTCGAAGATTCCAACGAACGCACACTGGACGACTTACTAGATCAAGTCGCGGAACTCGATGAGATATACACGGAGAACCGCACGCGGTTGGAAAACGCGTCCGACGACCGCAACCGCGACCTCGATGCGGACGCGGAAGATTTCAACGACGCCGGCACTTATACGAGCCTTCAGCTCGCGTTCAAAAATCCCATACGCATTGCGGAACCGGACACCACGGCTTACGAGGATGTGCAGGTGCAAACTTATCGCGGACCCATTATAGAATTTTCGTCCTTGAAACGCGACGACGAAGAAGCACCGCCTTTGCCGCCGAAACGCGTACGGAAAGCTCCGTCCGTCGAAGGCTTCAAGACCAGTCAAACTTCCGTCGATAGTTTCTTGAAGCCGGGCCGTCAATTGCCAATAACTCGCACGCCGGAACCGCGCTCGGAACTTTGCGGCGCTCGCAGTGAACCCGCGTTACCGCCGGCATCTAAAAAGCGCTCGTTTTTCTCGCGATTGTTTCGCAGGCGAGACAAATCGCCGGCGCCCAGTGTTAAATCTGAGGGCAGGAAAGAGAAGAAGTCGAAGCCGGTGGGTCGGTCCGTGAGTAGCGTGTCGGGCGTCCGTCCGTCAAAGTTCAAGTCGTCGGTGTCGCACGCGTCCTTGAAGGATAACGCGTCGGGAGCGGGATTGAGCTATGCGGATAGCGTGACGCATATTTCTCTGCACGGGGAAGCGGACGAAGTGGGTCGCTCCGCGTCGCAGACTTCTCTGCGACGCGGAGCGAGCGTAGGTCCGCTTCCGCCGACCGACGGCGGAACTATCCTCGTCGCCGAAAGCGTGTTAGCGTTAGACGCTTCCTCATTTCGCAAGCTCCAAGACGACCTGGAACTGACCGATGCGGAACATTACGCGTTATACATGGCGGTAGCTCCGCACGCGACCGCCTCGGAATTCGACGAAACCAGCTGCTATTATGCACCCGTCGATGGCAGTAAATTCAATAACTAA
- Protein Sequence
- MLEGFVGEVLALPKFWIQDYSVVLIKNEKRSKPTRKLADGIPSEENDNTEVNISDVRYCIMYMLCENRTYRGEIKKIYDLEVFVSLTVEAISSTDPERSMDAMHRHERRVNIVEQPASKALRFRYECEGRSAGSIPGVNSTPEKKTYPTIEIVGWTGKAVVVVSCVTKDKPYRPHPHNLVGREQCKKGLCTVYVDGADNKVTFNNLGIQCVRRRDIAEALKLRQEQNVDPFKTGFDHKNQPQSIDLNAVRLCFQVFLFDERSQSFRHGLAPVVSDIIYDKKAMSDLLIMRMSSCSGTAKGGTELILLCEKVIREETAVVFYETDGDRRVWEASAHIILVHKQVAIAVTTPPYRRPDTDRHARVHIQLRRTTDGACSPPVDFEYLPELLAGTARKPLPDLAALTLLLKDTNNNTAKPTDHCDSSPISVHSPSPSVDVVEAVDVVLEDVQVLEDSNERTLDDLLDQVAELDEIYTENRTRLENASDDRNRDLDADAEDFNDAGTYTSLQLAFKNPIRIAEPDTTAYEDVQVQTYRGPIIEFSSLKRDDEEAPPLPPKRVRKAPSVEGFKTSQTSVDSFLKPGRQLPITRTPEPRSELCGARSEPALPPASKKRSFFSRLFRRRDKSPAPSVKSEGRKEKKSKPVGRSVSSVSGVRPSKFKSSVSHASLKDNASGAGLSYADSVTHISLHGEADEVGRSASQTSLRRGASVGPLPPTDGGTILVAESVLALDASSFRKLQDDLELTDAEHYALYMAVAPHATASEFDETSCYYAPVDGSKFNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01388238; iTF_01386490; iTF_01387390;
- 90% Identity
- iTF_01386490;
- 80% Identity
- -