Basic Information

Insect: Synanthedon andrenaeformis
Gene Symbol: -
Assembly: GCA_936447275.2
Location: CAKZFQ020000721.1:97351-99511[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.7e-06 0.00017 22.2 3.6 2 23 114 135 113 135 0.98

2 15 0.00071 0.044 14.6 0.9 1 23 138 160 138 160 0.97

3 15 2.3e-05 0.0014 19.3 0.8 1 23 166 188 166 188 0.99

4 15 0.08 5 8.2 0.1 5 19 195 209 193 209 0.95

5 15 0.0011 0.07 14.0 0.2 1 23 218 240 218 240 0.97

6 15 1.3e-05 0.00083 20.1 1.0 1 23 246 268 246 268 0.98

7 15 1.4e-06 8.8e-05 23.1 1.0 2 23 301 323 300 323 0.95

8 15 1.5e-05 0.0009 19.9 2.5 2 23 331 353 330 353 0.94

9 15 6.3e-06 0.00039 21.1 1.4 2 23 361 383 360 383 0.94

10 15 3.1e-05 0.0019 18.9 0.7 2 23 391 413 390 413 0.91

11 15 0.0007 0.043 14.7 0.5 2 23 424 446 424 446 0.93

12 15 7.6e-05 0.0047 17.7 0.9 2 23 453 475 452 475 0.96

13 15 7.9e-06 0.00049 20.8 0.9 2 23 481 503 480 503 0.94

14 15 5.1e-06 0.00032 21.4 4.0 2 23 511 533 510 533 0.93

15 15 1.9e-05 0.0012 19.5 1.0 2 23 540 562 539 562 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.7e-06	0.00017	22.2	3.6	2	23	114	135	113	135	0.98
2	15	0.00071	0.044	14.6	0.9	1	23	138	160	138	160	0.97
3	15	2.3e-05	0.0014	19.3	0.8	1	23	166	188	166	188	0.99
4	15	0.08	5	8.2	0.1	5	19	195	209	193	209	0.95
5	15	0.0011	0.07	14.0	0.2	1	23	218	240	218	240	0.97
6	15	1.3e-05	0.00083	20.1	1.0	1	23	246	268	246	268	0.98
7	15	1.4e-06	8.8e-05	23.1	1.0	2	23	301	323	300	323	0.95
8	15	1.5e-05	0.0009	19.9	2.5	2	23	331	353	330	353	0.94
9	15	6.3e-06	0.00039	21.1	1.4	2	23	361	383	360	383	0.94
10	15	3.1e-05	0.0019	18.9	0.7	2	23	391	413	390	413	0.91
11	15	0.0007	0.043	14.7	0.5	2	23	424	446	424	446	0.93
12	15	7.6e-05	0.0047	17.7	0.9	2	23	453	475	452	475	0.96
13	15	7.9e-06	0.00049	20.8	0.9	2	23	481	503	480	503	0.94
14	15	5.1e-06	0.00032	21.4	4.0	2	23	511	533	510	533	0.93
15	15	1.9e-05	0.0012	19.5	1.0	2	23	540	562	539	562	0.94

Sequence Information

Coding Sequence: ATGGCAGTCGACGTCAAAGTTCAAAGAGAAGAGACTGCCAATGATGAACACAGAGACATAGCCATAAATAGCGTATTAGATGAAGAGTCCGATGAAGATGTCACAATTGAAGAGAGCAGAAAGGAAACAGATGCAACCTTGTGTGAATCTGAAGTACCGTTGATTAAACTCTACATAAAAGTTGAAAAGGAAGAGCCTCCCACTCACAACAATGAAGACAATCACTCAGATGTAAATGTGGTTTTAGACGAAGTATCCAATCAAGATGGCAGAATTGAAGAGAGCCGAAACGAATTAGATGAAAACTTCAGTGAATCTAAGAACGACAGACACGAGAATAAATGCAATATTTGCAATAGAACTTTTAGATTCAAAAAGTACCTAGAAAGTCACATGAAGACGCACTTTAGACATCGCTGTGAAGTATGCAATAGAGATTATCAGAGCAAAGGTGAATTGCTTAGACACGAAATGGTGCATAAGGATGAGAGAAAGTTTAAGTGCTCGATATGTAATAATGGGTTTACACTGAGCAGAAGTTTGAAGGCTCACATGGAAACACACAAGGATGAAACACCGCAGGAGTGCGGCCGGAAATTCAATGTCAAGAAAAGCTTATTGAGGCATCCTCAAAACATGGGTGTAAACAAGTACAGTTGCCAGTATTGTGATAAAGGATTTATGATGAAAGGTAGATTGGTTGCACATGAAATGATACACACGGACGTAAAACAATACGAGTGCGAAAAATGCAATAAATCGTTTAGAAGCAAAGATGTTTTGATAAGTCATAATAAAGTGCATGAGAAACATGAGCCACACAATTTTAACCTGCGTGAAAATAGATTCAAAAGAAGAGAAAATTTCAATAGACAAATGTTGACGCATGCTGGGATAATAGAGTGCGACGTTTGCAAGAAGACATTTCAACAAAAACAGAATTTAAGAAGGCACATGAAGGCTGTACATTTGGGCCTAAAGTCACCCATTCAGTGCGACATTTGCAAGAAAACATTTAAGCACAAGGATTATATGCGCCAGCACATGTCGGCTTTACATTTGGGCCTTAAGCCACCCAGTCAGTGTGAAATTTGCAAGAAGACATTTAAATACAAGCAATATCTACGTAACCACATGTCGGCTGTACATTTGGGCCTTAACCCACCCACTCAGTGCGACATTTGCAAGAAGACATTTAAATATAAACAGAGTTTAAGCAGGCACGTGGCGGCTGTACATTCAGGCTTTAAGCCAACGCCCACTCCCAATGAGTGCGACATTTGCATGAAGACATTTAAATACAAACAGAGTTTAAGCAGGCACATTTCGGCTGTACATTCGGACCTTCCACCCACTCAGTGCGACATTTGCAAAAATACATTTAAATACAAGGAAAATATACGCAAGCACATGTTGGTTGTACATTTGGGCTTTAAGTTAAAGTGTGACATATGCAAGAAGACATTTAAATACAAGCAAGGTCTACGCAGCCACATGTTGGCTGAACATTTGGGCTTTAAGCCACACACTCAGTGCGATATTTGCAAAAAGACATTTAAACACAAACGGAGTTTAAACAGGCACATGTCGGATCTACATTCGGACCTTCCACCCACTCAGTGCGATATTTGCAGGAAAACATTTAAATCCAAGGATACTATACGCAAGCACATGTTGGCTGTACATTTGGGCTTGAAGCGAACATGCATTAAAAGAAAAGTTATTTAA
Protein Sequence: MAVDVKVQREETANDEHRDIAINSVLDEESDEDVTIEESRKETDATLCESEVPLIKLYIKVEKEEPPTHNNEDNHSDVNVVLDEVSNQDGRIEESRNELDENFSESKNDRHENKCNICNRTFRFKKYLESHMKTHFRHRCEVCNRDYQSKGELLRHEMVHKDERKFKCSICNNGFTLSRSLKAHMETHKDETPQECGRKFNVKKSLLRHPQNMGVNKYSCQYCDKGFMMKGRLVAHEMIHTDVKQYECEKCNKSFRSKDVLISHNKVHEKHEPHNFNLRENRFKRRENFNRQMLTHAGIIECDVCKKTFQQKQNLRRHMKAVHLGLKSPIQCDICKKTFKHKDYMRQHMSALHLGLKPPSQCEICKKTFKYKQYLRNHMSAVHLGLNPPTQCDICKKTFKYKQSLSRHVAAVHSGFKPTPTPNECDICMKTFKYKQSLSRHISAVHSDLPPTQCDICKNTFKYKENIRKHMLVVHLGFKLKCDICKKTFKYKQGLRSHMLAEHLGFKPHTQCDICKKTFKHKRSLNRHMSDLHSDLPPTQCDICRKTFKSKDTIRKHMLAVHLGLKRTCIKRKVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01386029;
90% Identity: iTF_01386388;
80% Identity: iTF_01386388;