Basic Information

Insect: Synanthedon andrenaeformis
Gene Symbol: -
Assembly: GCA_936447275.2
Location: CAKZFQ020000721.1:78778-83277[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.5e-06 0.00015 22.4 3.6 2 23 74 95 73 95 0.98

2 15 0.00065 0.04 14.7 0.9 1 23 98 120 98 120 0.97

3 15 2.1e-05 0.0013 19.4 0.8 1 23 126 148 126 148 0.99

4 15 0.074 4.6 8.3 0.1 5 19 155 169 153 169 0.95

5 15 0.001 0.064 14.1 0.2 1 23 178 200 178 200 0.97

6 15 1.2e-05 0.00076 20.2 1.0 1 23 206 228 206 228 0.98

7 15 1.3e-06 8.1e-05 23.2 1.0 2 23 261 283 260 283 0.95

8 15 1.3e-05 0.00083 20.1 2.5 2 23 291 313 290 313 0.94

9 15 5.8e-06 0.00036 21.2 1.4 2 23 321 343 320 343 0.94

10 15 2.8e-05 0.0017 19.0 0.7 2 23 351 373 350 373 0.91

11 15 0.00064 0.04 14.8 0.5 2 23 384 406 384 406 0.93

12 15 6.9e-05 0.0043 17.8 0.9 2 23 413 435 412 435 0.96

13 15 7.2e-06 0.00045 20.9 0.9 2 23 441 463 440 463 0.94

14 15 4.7e-06 0.00029 21.5 4.0 2 23 471 493 470 493 0.93

15 15 1.8e-05 0.0011 19.7 1.0 2 23 500 522 499 522 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.5e-06	0.00015	22.4	3.6	2	23	74	95	73	95	0.98
2	15	0.00065	0.04	14.7	0.9	1	23	98	120	98	120	0.97
3	15	2.1e-05	0.0013	19.4	0.8	1	23	126	148	126	148	0.99
4	15	0.074	4.6	8.3	0.1	5	19	155	169	153	169	0.95
5	15	0.001	0.064	14.1	0.2	1	23	178	200	178	200	0.97
6	15	1.2e-05	0.00076	20.2	1.0	1	23	206	228	206	228	0.98
7	15	1.3e-06	8.1e-05	23.2	1.0	2	23	261	283	260	283	0.95
8	15	1.3e-05	0.00083	20.1	2.5	2	23	291	313	290	313	0.94
9	15	5.8e-06	0.00036	21.2	1.4	2	23	321	343	320	343	0.94
10	15	2.8e-05	0.0017	19.0	0.7	2	23	351	373	350	373	0.91
11	15	0.00064	0.04	14.8	0.5	2	23	384	406	384	406	0.93
12	15	6.9e-05	0.0043	17.8	0.9	2	23	413	435	412	435	0.96
13	15	7.2e-06	0.00045	20.9	0.9	2	23	441	463	440	463	0.94
14	15	4.7e-06	0.00029	21.5	4.0	2	23	471	493	470	493	0.93
15	15	1.8e-05	0.0011	19.7	1.0	2	23	500	522	499	522	0.94

Sequence Information

Coding Sequence: ATGGCTGCAACATTAAAGCAAACACCGTTATGCAGATGTTGTCACAAGTATGGTGTATTCAAGAGTCTATTTTCCGACTATATCTACAACGAGAATGAGGTTGAAAATTATTCTCAGATGTTGCAAGATACATTCGGAATCTCATCCCTTACAGAACGACACAGTGAATATCAGCATTTGTGCTGTTGTGTTTCGGTGAAGAACGACAGACACGAGAATAAATGCAATATTTGCAATAGAACTTTTAGATTCAAAAAGTACCTAGAAAGTCACATGAAGACGCACTTTAGACATCGCTGTGAAGTATGCAATAGAGATTATCAGAGCAAAGGTGAATTGCTTAGACACGAAATGGTGCATAAGGATGAGAGAAAGTTTAAGTGCTCGATATGTAATAATGGGTTTACACTGAGCAGAAGTTTGAAGGCTCACATGGAAACACACAAGGATGAAACACCGCAGGAGTGCGGCCGGAAATTCAATGTCAAGAAAAGCTTATTGAGGCATCCTCAAAACATGGGTGTAAACAAGTACAGTTGCCAGTATTGTGATAAAGGATTTATGATGAAAGGTAGATTGGTTGCACATGAAATGATACACACGGACGTAAAACAATACGAGTGCGAAAAATGCAATAAATCGTTTAGAAGCAAAGATGTTTTGATAAGTCATAATAAAGTGCATGAGAAACATGAGCCACACAATTTTAACCTGCGTGAAAATAGATTCAAAAGAAGAGAAAATTTCAATAGACAAATGTTGACGCATGCTGGGATAATAGAGTGCGACGTTTGCAAGAAGACATTTCAACAAAAACAGAATTTAAGAAGGCACATGAAGGCTGTACATTTGGGCCTAAAGTCACCCATTCAGTGCGACATTTGCAAGAAAACATTTAAGCACAAGGATTATATGCGCCAGCACATGTCGGCTTTACATTTGGGCCTTAAGCCACCCAGTCAGTGTGAAATTTGCAAGAAGACATTTAAATACAAGCAATATCTACGTAACCACATGTCGGCTGTACATTTGGGCCTTAACCCACCCACTCAGTGCGACATTTGCAAGAAGACATTTAAATATAAACAGAGTTTAAGCAGGCACGTGGCGGCTGTACATTCAGGCTTTAAGCCAACGCCCACTCCCAATGAGTGCGACATTTGCATGAAGACATTTAAATACAAACAGAGTTTAAGCAGGCACATTTCGGCTGTACATTCGGACCTTCCACCCACTCAGTGCGACATTTGCAAAAATACATTTAAATACAAGGAAAATATACGCAAGCACATGTTGGTTGTACATTTGGGCTTTAAGTTAAAGTGTGACATATGCAAGAAGACATTTAAATACAAGCAAGGTCTACGCAGCCACATGTTGGCTGAACATTTGGGCTTTAAGCCACACACTCAGTGCGATATTTGCAAAAAGACATTTAAACACAAACGGAGTTTAAACAGGCACATGTCGGATCTACATTCGGACCTTCCACCCACTCAGTGCGATATTTGCAGGAAAACATTTAAATCCAAGGATACTATACGCAAGCACATGTTGGCTGTACATTTGGGCTTGAAGCGAACATGCATTAAAAGAAAAGTTATTTAA
Protein Sequence: MAATLKQTPLCRCCHKYGVFKSLFSDYIYNENEVENYSQMLQDTFGISSLTERHSEYQHLCCCVSVKNDRHENKCNICNRTFRFKKYLESHMKTHFRHRCEVCNRDYQSKGELLRHEMVHKDERKFKCSICNNGFTLSRSLKAHMETHKDETPQECGRKFNVKKSLLRHPQNMGVNKYSCQYCDKGFMMKGRLVAHEMIHTDVKQYECEKCNKSFRSKDVLISHNKVHEKHEPHNFNLRENRFKRRENFNRQMLTHAGIIECDVCKKTFQQKQNLRRHMKAVHLGLKSPIQCDICKKTFKHKDYMRQHMSALHLGLKPPSQCEICKKTFKYKQYLRNHMSAVHLGLNPPTQCDICKKTFKYKQSLSRHVAAVHSGFKPTPTPNECDICMKTFKYKQSLSRHISAVHSDLPPTQCDICKNTFKYKENIRKHMLVVHLGFKLKCDICKKTFKYKQGLRSHMLAEHLGFKPHTQCDICKKTFKHKRSLNRHMSDLHSDLPPTQCDICRKTFKSKDTIRKHMLAVHLGLKRTCIKRKVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01386029;
90% Identity: iTF_01386388;
80% Identity: iTF_01386388;