Sand011959.1
Basic Information
- Insect
- Synanthedon andrenaeformis
- Gene Symbol
- -
- Assembly
- GCA_936447275.2
- Location
- CAKZFQ020000721.1:97351-99511[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.062 29 5.2 7.6 7 43 103 140 102 141 0.88 2 14 0.28 1.3e+02 3.1 2.3 3 30 124 151 122 158 0.85 3 14 0.044 20 5.7 1.2 12 40 161 186 152 189 0.78 4 14 0.99 4.6e+02 1.3 0.3 14 25 215 226 204 237 0.77 5 14 0.94 4.4e+02 1.4 0.8 15 29 244 258 235 268 0.76 6 14 0.00023 0.11 12.9 1.3 15 43 298 323 290 324 0.92 7 14 0.05 23 5.5 0.6 17 39 330 349 327 353 0.79 8 14 0.022 10 6.6 1.1 18 43 361 383 360 384 0.85 9 14 0.0057 2.6 8.5 0.2 18 43 391 413 389 414 0.84 10 14 0.00036 0.17 12.3 0.1 15 43 421 446 416 447 0.83 11 14 0.033 15 6.1 0.3 18 39 453 471 451 476 0.83 12 14 0.00059 0.27 11.7 1.0 16 43 479 503 477 509 0.80 13 14 0.23 1.1e+02 3.4 2.7 18 40 511 530 506 534 0.77 14 14 0.28 1.3e+02 3.1 3.1 18 39 540 558 527 569 0.75
Sequence Information
- Coding Sequence
- ATGGCAGTCGACGTCAAAGTTCAAAGAGAAGAGACTGCCAATGATGAACACAGAGACATAGCCATAAATAGCGTATTAGATGAAGAGTCCGATGAAGATGTCACAATTGAAGAGAGCAGAAAGGAAACAGATGCAACCTTGTGTGAATCTGAAGTACCGTTGATTAAACTCTACATAAAAGTTGAAAAGGAAGAGCCTCCCACTCACAACAATGAAGACAATCACTCAGATGTAAATGTGGTTTTAGACGAAGTATCCAATCAAGATGGCAGAATTGAAGAGAGCCGAAACGAATTAGATGAAAACTTCAGTGAATCTAAGAACGACAGACACGAGAATAAATGCAATATTTGCAATAGAACTTTTAGATTCAAAAAGTACCTAGAAAGTCACATGAAGACGCACTTTAGACATCGCTGTGAAGTATGCAATAGAGATTATCAGAGCAAAGGTGAATTGCTTAGACACGAAATGGTGCATAAGGATGAGAGAAAGTTTAAGTGCTCGATATGTAATAATGGGTTTACACTGAGCAGAAGTTTGAAGGCTCACATGGAAACACACAAGGATGAAACACCGCAGGAGTGCGGCCGGAAATTCAATGTCAAGAAAAGCTTATTGAGGCATCCTCAAAACATGGGTGTAAACAAGTACAGTTGCCAGTATTGTGATAAAGGATTTATGATGAAAGGTAGATTGGTTGCACATGAAATGATACACACGGACGTAAAACAATACGAGTGCGAAAAATGCAATAAATCGTTTAGAAGCAAAGATGTTTTGATAAGTCATAATAAAGTGCATGAGAAACATGAGCCACACAATTTTAACCTGCGTGAAAATAGATTCAAAAGAAGAGAAAATTTCAATAGACAAATGTTGACGCATGCTGGGATAATAGAGTGCGACGTTTGCAAGAAGACATTTCAACAAAAACAGAATTTAAGAAGGCACATGAAGGCTGTACATTTGGGCCTAAAGTCACCCATTCAGTGCGACATTTGCAAGAAAACATTTAAGCACAAGGATTATATGCGCCAGCACATGTCGGCTTTACATTTGGGCCTTAAGCCACCCAGTCAGTGTGAAATTTGCAAGAAGACATTTAAATACAAGCAATATCTACGTAACCACATGTCGGCTGTACATTTGGGCCTTAACCCACCCACTCAGTGCGACATTTGCAAGAAGACATTTAAATATAAACAGAGTTTAAGCAGGCACGTGGCGGCTGTACATTCAGGCTTTAAGCCAACGCCCACTCCCAATGAGTGCGACATTTGCATGAAGACATTTAAATACAAACAGAGTTTAAGCAGGCACATTTCGGCTGTACATTCGGACCTTCCACCCACTCAGTGCGACATTTGCAAAAATACATTTAAATACAAGGAAAATATACGCAAGCACATGTTGGTTGTACATTTGGGCTTTAAGTTAAAGTGTGACATATGCAAGAAGACATTTAAATACAAGCAAGGTCTACGCAGCCACATGTTGGCTGAACATTTGGGCTTTAAGCCACACACTCAGTGCGATATTTGCAAAAAGACATTTAAACACAAACGGAGTTTAAACAGGCACATGTCGGATCTACATTCGGACCTTCCACCCACTCAGTGCGATATTTGCAGGAAAACATTTAAATCCAAGGATACTATACGCAAGCACATGTTGGCTGTACATTTGGGCTTGAAGCGAACATGCATTAAAAGAAAAGTTATTTAA
- Protein Sequence
- MAVDVKVQREETANDEHRDIAINSVLDEESDEDVTIEESRKETDATLCESEVPLIKLYIKVEKEEPPTHNNEDNHSDVNVVLDEVSNQDGRIEESRNELDENFSESKNDRHENKCNICNRTFRFKKYLESHMKTHFRHRCEVCNRDYQSKGELLRHEMVHKDERKFKCSICNNGFTLSRSLKAHMETHKDETPQECGRKFNVKKSLLRHPQNMGVNKYSCQYCDKGFMMKGRLVAHEMIHTDVKQYECEKCNKSFRSKDVLISHNKVHEKHEPHNFNLRENRFKRRENFNRQMLTHAGIIECDVCKKTFQQKQNLRRHMKAVHLGLKSPIQCDICKKTFKHKDYMRQHMSALHLGLKPPSQCEICKKTFKYKQYLRNHMSAVHLGLNPPTQCDICKKTFKYKQSLSRHVAAVHSGFKPTPTPNECDICMKTFKYKQSLSRHISAVHSDLPPTQCDICKNTFKYKENIRKHMLVVHLGFKLKCDICKKTFKYKQGLRSHMLAEHLGFKPHTQCDICKKTFKHKRSLNRHMSDLHSDLPPTQCDICRKTFKSKDTIRKHMLAVHLGLKRTCIKRKVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01386029;
- 90% Identity
- iTF_01386388;
- 80% Identity
- iTF_01386388;