Sstr100184.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sympetrum striolatum
Gene Symbol
-
Assembly
GCA_947579665.1
Location
OX388342.1:30591759-30611218[+]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.9 9.5e+04 -4.2 0.1 16 28 411 423 406 426 0.75
2 2 1.5e-18 3.6e-14 54.8 0.0 6 76 824 894 819 895 0.91

Sequence Information

Coding Sequence
ATGGATTGGCGATTTTGTAGGTGGCGGCCTCACATGGAACAGGAAGAGAGCGATGGCGGGAAGGTGGAGCGCGCAGACAGCAAGAGCGGGGGAAAGGGAGTGCACGGATCGgccgccgctgcttccaacgccaacgccgccgccgccgctgccgctgctgcagccgctCAGCTCCTCGACGCCGCCGGCCTTTTCGCCTACTGGCCACGGAGTGAAGCCTCCTCGGCTGCACCTGGAGCCTCTTCCTCTCATCCATTATTTGGGGGAGCGGGTGGCGGTGCAGCAGCTCCATCCTCTTTTGCAAACCACCATTTAGCTCACTTGCCCCCAGCAGCATATGCGATGATGGGTCGTCATCCTCCTGCTCCCACCTTTGGTGTCCCACCACCTCCAGCTGCGCCAGCGTATGGGTCACTGGGAACCCTTGGAGTTGCTGCGGGTCAAGCTGCCTCTCTGGGAATCAATCCAGCTAGTGCAGCTTGGTGGACCATGGCATCTCATTTAGCAGCCCAGGACTACCTGGCTCGTCTGCAGGCTTCTGGAGGTCTACCATTCGGAGGTCTGCCTGGGGACAGTCCAGTCCCTGCATTCGACCTTCTCTCCCCTCATACAAGCCAACCGCAAACGCAACCGCCCTCAAAGTCATCCTCAAGTGGGCAGAAATCGTCCAAGTCATCTTCGAGTCGACCACCATCGAGAGCAGGAGGGAGGGCAGTGCCAACACCTCCCACATCCTTAGCGCCGCCAACCTCATCGGCTCCTCCTCCTCCACCGCCTCCACCACCCCCTCCTCGGCTTCAGCAGAGCCAACACCCGATGCCGCTAACATCCACAGCAAGCATTGCGTCGTCTACTTCTACCACAACTGGGATTGTCAGTGCTCCATGCGAGGGAGGCGACCCATCCAGCATTCTTGGAGGAGTTCGCCTGCCCCCTGACACAGAGATCATCAAATATACATCATCTATAGTGGGTCCTAAGGTGCCTGGCACTACCAACAGGGGGCGCAAGAAGACCATCTCCCTGGATCCGCCATCGGTGACTGTGGTGCCCACGACGGGAGGTGTGGCTCTCCTTCCTCCACCTCCCCCTCCTCACCATCTCCCTGCACATCTTCCTCCCTCTCCCCATTTCCCGCCTCACCATCCCTTACCAGGCCATCTTCCTCAAGGCCGCCCCCTTCTCCCTCCTCCTCCATCGTCATCTCCTGCGGCAGCCCCCAGCGGTGGCCAGTCTGCTGAGAGGAGGAGGAGTTCAGGCTCTAGCAGTGGTGCCGGACGTCACGTGGATCCTGAGTTCCCATCTCTTTCGGCTGTGCAACCAATGGACAGAGTGGAAGTGATTCGACTACCGCCACATGGAATTGGAGCCGTGGCCGATCCAAGAAGTGGTGATGCAGCTCTACGTAACCTCCGTGGTCATGCTCCTCCCCCATCTCCACATCCCCCCGCCCCTGCCCACAACACGAGTCGTCGTCATGGCTCCTCAAACCTTGACTCCGTCCCTTTCCCCCCATCTGCATCTCCCACTCCTCCGTCACCTAGACCTGATGTTGATGCTCCACTAAACCTCTCTCTCAAGCCTCAGCGGACGCCCACTGCACCTCCTGCAGAGCCTCCAGTTTGCTCCTCTCCACCAAGGGGTCCAGTCCTCCTTGATCTCTCTCTCTCTGGTTCTCAGCAATCTGGAGCACCACCTAGGCCACGTCCACCCCCTGTGGGACAACCATCCTCTATGTCCGGGGAACCTAGGATTTCTCGGCGTAAACCTGGGCCTAGACCTCGAAGAGTAATACAAACTCATCCCTCGACATCACCATTGGCGCCAGTGCCTCTTACTGCACAGGGTGCCTCAACCTCCCCATTGCTGTCAACTAGCCTTACCTCCTGTCCTAAGGCAGAGTCTCCTGGACGCTCGGATGATAGTGACATGGGGAGCAAAGAGAGCCGTCCTCCCAGAAACCTTGGACGAGGAGTTTCCAAGCCTAAGAAGAACACAGTAGCATCTCTCCTTGCCCAGAGCCGTGCTCTTGGAGTCAAACCTTCGGTCGCTTGCTTAGAGAGGGGGGTCTCCCCTGTGAGAGCTTCTCTCTCTAGACAAGCCGAAGGTTCTGGAGACAGTATGCATGGGGTTCTGGGAGAATCTTCATCTGGTGATGTGCAAATGGGAGAGGGCAGTACAGCAACTTCTTTGTGTACCAAAGATATGACGCCAGAGGATCTTAGGGATGGAGAGGGAGTCTCTTCACCAAAAGTGAAGTCTGACGAGGGGCCAAAGGGGTCTGAGGGATATGCTGCCAGTGTAATAAGTTTCCATACCTCAGATTCTGAGGATGAAGATGAGGATCAAGATAGAAGATCAGGAATTGGAGGTGAACTTGGTGAAGGATTAGGAAATGATTGTGGGGGTCCTTCTGCAAAGAGACGCAGAGTCTGGAGTGGCACAGAAGGATCTATTCCAGATGAGCTCAAGCTCCGCATCCCACTTGAAAGAGGTTGGCTACGAGAGACTGTGATTAGAGGTTTGAGCCGCAAGGGGCAAATTCGAGGGGAAGTCACTTATGTTTCTCCATGTGGTCATCGTTTCACCCAACACCAGGAAATAATTGGGTATTTGGAGAAGAATGGCAATATTGACCTCACCAAAGATCACTTTTCATTCAACTCTAAGCTGTTAATGGGAGATTTCCTTCAGCCCATGGGTGCAATCACACCTGGTGGAAATGAAGAATGCCTTCGGCTCTCAGAAGTTGAAGTGGCTAGGAGAATTGATGAATTACGCCTGTCTCGTCCTTGGATGCCTAGTTCACAAAGGAGGACTACAAGCGAAAGCTCTGTAAACACTCGATCAGAAGACGATATGCAACATGTTCGGTCAGATCCTAGAGAAGCACATCTTCAGCCAAGGGATCATGGACCATCACATCCTGGAGACAGAGAGAGACAAGCAATGATGGCACGAGAAGCCAAGCGTCTTGCCCGGGAAGAAGTTCAGAGGCAAAGAGAGCAAGCAAGATTAGCAAAAGAACAGGAAAAGCTTGAGAGGCAAGAAGCTGCACGCAGGGAAAGGGAACTTAGAGCGCAGCAAGCAATGGAGGTAATGACATGA
Protein Sequence
MDWRFCRWRPHMEQEESDGGKVERADSKSGGKGVHGSAAAASNANAAAAAAAAAAAQLLDAAGLFAYWPRSEASSAAPGASSSHPLFGGAGGGAAAPSSFANHHLAHLPPAAYAMMGRHPPAPTFGVPPPPAAPAYGSLGTLGVAAGQAASLGINPASAAWWTMASHLAAQDYLARLQASGGLPFGGLPGDSPVPAFDLLSPHTSQPQTQPPSKSSSSGQKSSKSSSSRPPSRAGGRAVPTPPTSLAPPTSSAPPPPPPPPPPPRLQQSQHPMPLTSTASIASSTSTTTGIVSAPCEGGDPSSILGGVRLPPDTEIIKYTSSIVGPKVPGTTNRGRKKTISLDPPSVTVVPTTGGVALLPPPPPPHHLPAHLPPSPHFPPHHPLPGHLPQGRPLLPPPPSSSPAAAPSGGQSAERRRSSGSSSGAGRHVDPEFPSLSAVQPMDRVEVIRLPPHGIGAVADPRSGDAALRNLRGHAPPPSPHPPAPAHNTSRRHGSSNLDSVPFPPSASPTPPSPRPDVDAPLNLSLKPQRTPTAPPAEPPVCSSPPRGPVLLDLSLSGSQQSGAPPRPRPPPVGQPSSMSGEPRISRRKPGPRPRRVIQTHPSTSPLAPVPLTAQGASTSPLLSTSLTSCPKAESPGRSDDSDMGSKESRPPRNLGRGVSKPKKNTVASLLAQSRALGVKPSVACLERGVSPVRASLSRQAEGSGDSMHGVLGESSSGDVQMGEGSTATSLCTKDMTPEDLRDGEGVSSPKVKSDEGPKGSEGYAASVISFHTSDSEDEDEDQDRRSGIGGELGEGLGNDCGGPSAKRRRVWSGTEGSIPDELKLRIPLERGWLRETVIRGLSRKGQIRGEVTYVSPCGHRFTQHQEIIGYLEKNGNIDLTKDHFSFNSKLLMGDFLQPMGAITPGGNEECLRLSEVEVARRIDELRLSRPWMPSSQRRTTSESSVNTRSEDDMQHVRSDPREAHLQPRDHGPSHPGDRERQAMMAREAKRLAREEVQRQREQARLAKEQEKLERQEAARRERELRAQQAMEVMT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01504697;
90% Identity
iTF_01131562;
80% Identity
-