Sstr025171.1
Basic Information
- Insect
- Sympetrum striolatum
- Gene Symbol
- tfip11
- Assembly
- GCA_947579665.1
- Location
- OX388349.1:53700287-53716520[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-96 3.3e-91 308.4 12.2 1 275 383 662 383 662 0.95 2 2 0.059 3.6e+03 -0.0 0.1 243 271 675 703 668 709 0.78
Sequence Information
- Coding Sequence
- ATGTCTGATGATGAAGTTGAAGCGTTTGAGATAACCGAGTATGACCTCGAAAATGAATTCAACATTAATAGGCCTACTCGGCGAATCACTAAAAATCAACATATATACGGAATATGGTCCACCGATAGTGATGGCGATGACTCGAGGCCCAGCTTCAAGGGAACTTCCAAAAAGAATTACACCACTCCAGTTAGCTTTATCGCAGGAGGTATACAGCAGGCAGGTAAAAAAGAAGGGAAAGATAAAGAAGAAAATAAGGAAGACGATGAAGGGGAAGAGGGAGTTGAGGATGACGTAGGAACATCAAGTGATGAAGAAGAGGTCAAAATGACATTTTCCTCGAGGTCTACTCGAGTTGAGATGAGACCAGATGGTCAGATTGCTGGTCTTAGAAGAAGGGGTATGACTACTCAATTATCTTCGCGAGGAGTTGGAAATTGGGAGAAATATACGAAAGGAATTGGTGCCAAGTTGCTGTTGCAGATGGGTTTTCAACCAGGAAAGGGTCTTGGTAAAGACTTGCAGGGAATTTCAGCTCCTATTGAAGCACATTTAAGAAAAGGGAGAGGGGCTATAGGGGCTTATGGACCAGAAAAAGGACAGAAAGTTGCAGAAATAAAGCCTGATTCAGAAGAAGAAGAAATGAAAGAATATTCAGAAATATTATCTCAATGGAGAAAAGGTGATAAAGGGAAAAAGACTAAAGTCCGTTATGTATACAAGAGTGTGGATGAAGTACTGGAAGAAGGAAAATCAAAGAAGATGAAGAAAGAATACAGCCATCTAAGCAAGGTGAAAGTGATTGACATGACTGGCCCAGAGAGGAGAGTACTTAGTGGTTACCATGCTATTGCTGGACAACAAAGGCCCACTGATGAATGGGAAATTCGCAAGGAGAAAAAGTTTGAAAATTTTGCTCTTCCTGAACTGCAGCACAATCTCAACATATTGGTGGAAATGTGTGAACAGGATATAATTCAAAATGACAAACGGCTAAGGTACGCCAAAGATAGAATTGTGGCATTGGAACAGGAAGAAACTAGTTTGGGAAAACTTGTTACTCAGGAAAAGGAGCAAGTTGCTGCTCTCGAGTCATTATTGTCTGTTATTGAATCAATAACGGAAAAAGGAGAAAGTGGGCTGACCCTGGAGAAAGCTGCTCAGTGCTTCAATGATTTGAAGGAAAATTACTACGAGGCTTACAAAATGTATGAGTTAGGGGAGCTGGCTGTTGGCATTGTTGCTCCTTTACTCAAGAAAAGACTGGAAGATTCGTGGAAACCTCTTGAGAATCCTCAAGGATCTGAGGAGCTTCAGAACATTTTCAGGCAGTGGAGGGACATGCTGGAATGGAGTGGGAGGTCTGGGTCTAATTCTATATCAGCTGACATGGATGGTGGCATGGCAGATCCTTATCATCGACTCATATGGGAAGCATGGATGCCGAGTATCAGGGGTGCTGTGAGTGAGTGGAACTGCAGGGGAAAATGTGAAGTCATGATTGAAATCCTCGAAGCCTGGATGCCACTGATACCAACGTGGGTACTCGACTCAATATGTGACCGATTGATTCTACCAAAGATACAGGCTGCTGTTGAATGCTGGAATCCTCTAACTGATACAGTACCAATTCATGCTTGGATCCATCCATGGCTACCTTTACTTGGAAGTCGTTTGGAAATTGTATATCCAACCATTAGGCAGAAGTTATCTGTAGCTCTTGTTAATTGGCATCCATCAGACCGTTCTGCAAGGCTGATGTTAACACCATGGTCAAAAGCCTTTCCCAAAGGAGATATGGATGCTTTCCTGGTGAAGAATATACTACCAAAACTACAAGTGGCTCTGCAAGAATTTCAAATTAACCCTCACCAACAGCATCTAGATCAGTGGAACTGGGTGATGGAGTGGGTCGATTTAATTCCAATCCATATTATGACTACCCTTTTAGAAAAATTCTTCTTCCCTAAATGGCTACAGATTCTTTCCCTATGGCTCAGCCATTCTCCCAATTATGACGAAGTGACTAATTGGTATATGGGATGGAAGAGCATGCTTTCAGAAGCCTTTTTGTCCCAACCTCAGATCAAAGAACAATTCCACAAGGCCCTGGAGATGATGAATCGAACAGTGATGCCTGCTGCTACATTGGGAGTGGTCAGTCAACCCCCACCACCTCCTCCACCTCCCCCTCCCATACCAAATATTCCTCCGCAAATACCAGTGGAGGGTGCAGTTCCTTCATACATTGGTGGAATGGATTGCAACATACCTCCACCTCCACCAATGCGAAGACCTGAGCCGAGATTTGAGATGATTGCTGAAGCTGTAAGAACAGCAAGCCAAATACCACAAGGCTTCAGAGATCTTCTTCAAAAACGTTGTGAGGAGAGGGGCATCGTTTTCATGCCACTTCCAAATAGGTGGAGAGAGGGCAAGCAAGTGTATCGCGTTGGCAAGTTGCAGGAGCTGGGAGCTTCACGGGACCCAGGGCAAGATGAGCTGCGAGCTTTACAGGACACAGGACAAGAGGAGCTTGGAGCTGCAAAAGAACCAGGACAAGAAGAGGAGCTGAGTCTTCCGCCGATGGGTTATTTAATCGTAAGGTCAGTGATTATTCTTCGCAGATGGCGCACTCACCGATGGATGGAATCTTATCTTTCCTCATCGAAATGTAGGAAGACTTCTCCCTATACTAACAGCCTTCACTAG
- Protein Sequence
- MSDDEVEAFEITEYDLENEFNINRPTRRITKNQHIYGIWSTDSDGDDSRPSFKGTSKKNYTTPVSFIAGGIQQAGKKEGKDKEENKEDDEGEEGVEDDVGTSSDEEEVKMTFSSRSTRVEMRPDGQIAGLRRRGMTTQLSSRGVGNWEKYTKGIGAKLLLQMGFQPGKGLGKDLQGISAPIEAHLRKGRGAIGAYGPEKGQKVAEIKPDSEEEEMKEYSEILSQWRKGDKGKKTKVRYVYKSVDEVLEEGKSKKMKKEYSHLSKVKVIDMTGPERRVLSGYHAIAGQQRPTDEWEIRKEKKFENFALPELQHNLNILVEMCEQDIIQNDKRLRYAKDRIVALEQEETSLGKLVTQEKEQVAALESLLSVIESITEKGESGLTLEKAAQCFNDLKENYYEAYKMYELGELAVGIVAPLLKKRLEDSWKPLENPQGSEELQNIFRQWRDMLEWSGRSGSNSISADMDGGMADPYHRLIWEAWMPSIRGAVSEWNCRGKCEVMIEILEAWMPLIPTWVLDSICDRLILPKIQAAVECWNPLTDTVPIHAWIHPWLPLLGSRLEIVYPTIRQKLSVALVNWHPSDRSARLMLTPWSKAFPKGDMDAFLVKNILPKLQVALQEFQINPHQQHLDQWNWVMEWVDLIPIHIMTTLLEKFFFPKWLQILSLWLSHSPNYDEVTNWYMGWKSMLSEAFLSQPQIKEQFHKALEMMNRTVMPAATLGVVSQPPPPPPPPPPIPNIPPQIPVEGAVPSYIGGMDCNIPPPPPMRRPEPRFEMIAEAVRTASQIPQGFRDLLQKRCEERGIVFMPLPNRWREGKQVYRVGKLQELGASRDPGQDELRALQDTGQEELGAAKEPGQEEELSLPPMGYLIVRSVIILRRWRTHRWMESYLSSSKCRKTSPYTNSLH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01504694;
- 90% Identity
- iTF_01131557;
- 80% Identity
- -