Plon073912.1
Basic Information
- Insect
- Pachydiplax longipennis
- Gene Symbol
- tfip11
- Assembly
- GCA_036926295.1
- Location
- JAVFKF010000019.1:44403136-44414716[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-96 9.3e-92 309.8 13.1 1 275 384 663 384 663 0.95 2 2 0.037 1.7e+03 0.6 0.1 243 272 676 705 669 710 0.79
Sequence Information
- Coding Sequence
- ATGTCTGATGATGAAGTGGAAGCGTTTGAGATAACTGAGTATGACCTcgaaaatgaattcaatatcAACAGGCCTACTCGTAGAATCACTAAAAATCAACATATTTATGgAATATGGTCCACCGACAGTGATGGCGAAGAGAGGCCTAGCTTCAAGGGAACTGCTTCCAAAAAGAGTTATACAACACCAGTTAGTTTTATCGCAGGAGGTATACAGCAGGCTGgtaaaaaagaagggaaagaaatcaaagaagaaaataaggaagatgatgaaggggaAGAGGGAGTTGAAGATGATGCAGGAACATCAAGCGATGAAGATGAGGTCAGGATGTCATTTTCCGCGAGGTCTACTCGAGTTGAGATGAGACCTGATGGACAAATTGCAGGTCTCAGAAGAAGGGCTATGACTTCTCAATTAGCTTCTCGGGGAGTCGGCAATTGGGAGAAATATACGAAAGGAATCGGTGCCAAGTTGCTTTTGCAGATGGGTTTTCAACCAGGAAAAGGTCTTGGTAAAGACTTGCAGGGAATTTCAGCTCCTATAGAAGCACATTTAAGAAAAGGGAGAGGAGCCATTGGGGCTTATGGACCAGAAAAAGGACAGAAAATTGCAGAAGTTAAGGTGGATTCTgaagaggaagaaatgaaagaatattcagaaatattatcTCAATGGAGAAAAGGTGATAAAGGTAAAAAGACAAAAGTCCGTTATGTATACAAGAGTGTGGATGAAGTGCTGGAAGAAGGGAAAtcaaagaagatgaaaaaagaaTATAGCCACCTAAGCAAGGTTAAAGTGATTGACATGACTGGTCCAGAGAGGAGAGTACTTAGTGGTTACCATGCTATTGCTGGACAGCAAAGGCCCACAGATGAATGGGAAATTCGCAAggagaaaaaatttgaaaattttgctcttcctgAACTTCAGCACAATCTCAACATATTAGTGGAAATGTGTGAACAGgatatcattgaaaatgacaAACGACTAAGGTATGCCAAAGATAGAATTGTAGCATTGGAACAGGAAGAAACTAGTTTGGGAAAACTTGTTTCTCAGGAAAAGGAGCAAGTTGCTGCTCTTGAGTCATTATTGTCTGTTATTGaatcaataacagaaaaaggagaaaatgaacTGACACTGGAGAAAGCAGCTGAGTGCTTCAATGATTTGAAGGAAAATTACTATGAAGCATACAAAATGTATGAGTTAGGGGAGCTAGCTGTTGGCATTGTTGCTCCTTTACTTAAGAAAAGACTTGAGGAGACATGGAAACCCCTTGAGAATCCAAAAGGATCTGAGGAGCTTCAGAACATCTTCAGACAGTGGAGGGACATGTTGGAATGGAGTGGAAGGTCTGGTTCCAATTCTATATCAGCTGATATGGATGGTGGTATGGCAGATCCATATCATCGACTTATATGGGAATCATGGATGCCAAGCATTAGGGCTGCTGTGAGTGAGTGGAACTGCAGGGGGAAGTGTGAAGTTatgattgaaattcttgaagCCTGGATGCCACTCATTCCAACGTGGGTGCTTGACTCAATATGTGACCGATTGATTCTGCCAAAGATACAGGCTGCTGTTGAATGCTGGAATCCTCTAACAGATACAGTCCCAATTCATGCTTGGATTCATCCATGGCTACCTTTGCTTgGAAGTCGCTTGGAAATTGTATATCCTACCATTAGGCAGAAGTTATCTGTAGCTCTTGTAAATTGGCATCCTTCAGATCGTTCTGCAAGGCTAATGTTAACACCTTGGTCAAAAGCATTTCCCAAAGGAGATATGGATGCTTTCCTCGTGAAGAACATTCTGCCAAAACTACAAGTTGCTTTgcaagaatttcaaattaatcctCACCAACAGCATCTTGATCAATGGAACTGGGTAATGGAATGGGTTGATTTAATTCCGATTCATATTATGACCACTCTTCtagaaaaattcttcttccCAAAATGGCTGCagatccTTTCCTTATGGCTCAGCCATTCTCCCAACTATGATGAAGTGACTAATTGGTATATGGGATGGAAGAGCATGCTTTCAGAAACCTTTTTGGCTCAGCCTCAGATCAAAGAACAATTCCAGAAGGCTCTTGAGATGATGAATCGAACAGTGATGCCAACTACTAACTTAGGAGTGGTCAGTCAGCCTCCACCGccacctcctcctcccccacccATTCCTACAATTCCTTCTCAAATACCAGTGGAGGGTGCTGTTCCTTCATACATTGGTGGAATGGATTGCAACATACCTCCGCCACCTCCTATGCGAAGACCTGAGCCACGATTTGAGATGATTGCTGAAGCTGTAAGAACAGCAAGCCAAATACCACAAGGCTTCAGGGATCTTCTTCAGAAGCGTTGTGAAGAAAGAGGCATTGTCTTCATGCCACTTCCGAATAGGTGGAGAGAAGGCAAACAAGTGTATCGTGTTGGAAAGTTGCAGGTGTATTTGGACAGAAATGtgattttcatgtttcaaaatGGAACTTGGGTTCCATCTTCCCTCATGTCTGTGTTGGAAATGGCTGTATAG
- Protein Sequence
- MSDDEVEAFEITEYDLENEFNINRPTRRITKNQHIYGIWSTDSDGEERPSFKGTASKKSYTTPVSFIAGGIQQAGKKEGKEIKEENKEDDEGEEGVEDDAGTSSDEDEVRMSFSARSTRVEMRPDGQIAGLRRRAMTSQLASRGVGNWEKYTKGIGAKLLLQMGFQPGKGLGKDLQGISAPIEAHLRKGRGAIGAYGPEKGQKIAEVKVDSEEEEMKEYSEILSQWRKGDKGKKTKVRYVYKSVDEVLEEGKSKKMKKEYSHLSKVKVIDMTGPERRVLSGYHAIAGQQRPTDEWEIRKEKKFENFALPELQHNLNILVEMCEQDIIENDKRLRYAKDRIVALEQEETSLGKLVSQEKEQVAALESLLSVIESITEKGENELTLEKAAECFNDLKENYYEAYKMYELGELAVGIVAPLLKKRLEETWKPLENPKGSEELQNIFRQWRDMLEWSGRSGSNSISADMDGGMADPYHRLIWESWMPSIRAAVSEWNCRGKCEVMIEILEAWMPLIPTWVLDSICDRLILPKIQAAVECWNPLTDTVPIHAWIHPWLPLLGSRLEIVYPTIRQKLSVALVNWHPSDRSARLMLTPWSKAFPKGDMDAFLVKNILPKLQVALQEFQINPHQQHLDQWNWVMEWVDLIPIHIMTTLLEKFFFPKWLQILSLWLSHSPNYDEVTNWYMGWKSMLSETFLAQPQIKEQFQKALEMMNRTVMPTTNLGVVSQPPPPPPPPPPIPTIPSQIPVEGAVPSYIGGMDCNIPPPPPMRRPEPRFEMIAEAVRTASQIPQGFRDLLQKRCEERGIVFMPLPNRWREGKQVYRVGKLQVYLDRNVIFMFQNGTWVPSSLMSVLEMAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01504694;
- 90% Identity
- iTF_01384724;
- 80% Identity
- -