Sbel013392.2
Basic Information
- Insect
- Sturmia bella
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963662145.1
- Location
- OY759170.1:73349990-73361099[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.08 9.6e+02 -0.8 0.1 237 287 24 81 15 88 0.41 2 6 0.041 4.9e+02 0.2 3.6 50 85 79 114 60 139 0.69 3 6 0.36 4.3e+03 -2.9 0.1 239 264 213 238 162 267 0.63 4 6 0.28 3.3e+03 -2.5 0.3 34 44 245 255 209 299 0.51 5 6 2.4e-116 2.9e-112 375.2 25.8 1 299 342 638 342 639 0.93 6 6 0.14 1.7e+03 -1.6 3.7 220 245 667 692 642 713 0.47
Sequence Information
- Coding Sequence
- ATGGATACTTCAAGTGCCGTAGGTCGGCGCCGTGTAAATTCACGTGTTAATGCTGAAGATCAAGCTTTAGATCAAATTGCAAAAGAGcatgCACATTTAACTAATGTCAATAGTAAAAATGTTGtgagtactaaaaacaacacgaacaacaacaacaacagcaatgctGAAGTGGCAAACGATGAAATCATCGAGGAGTTGTTTGATTTTAGCGATACCGATTTAAAAGAACTCGACGATATTAAAAACGAGCAAGAAATAATTAGCAATAGCAACTCTTGCTCCAGTGCAAAGCGTTTGAGCGAAGACAGCACCAAATTAGAGGATAATGAGAAAATGAATGATGAATGTTCAGAAGCACATTTGCAAAATATGACAAGTGACAATAACAATAATCGCAATAAGGTggaggaaaaaaataatatgcaacaGCCACAGGTGGAACCAGCATTGATATCGCCTTCAGTTGATAGCGTAGATAAACAAGATAAAGATACCGCAGGAAATAATGAATTAGTCAGTGCAACAGCACCAACCATAAACAACATAATTAGCGCACCAGAAAATGTTGATAAGGGCGCAACTGATAAAAAGCAGCAAAATTTAATAGATCCAATTATGGCAGAACATGGCGAAGAAAATGATTTATCATCCAACAAAGACGATTCTAAAAGTTACGCACAAAAATCCAATAGTTCTTTTGTTAGCGACTCTGGCAATGAAGTTGACAACAATGACATCAATTTTGCAACATCTTCAGACATGAAGCCAGAGAAAACAAACAATGTGTCAGAGTCATCGCCTTTGATTGGAATTCCAGCAGAAGGTAGCAGTAgtagtagcagcagcagcagcaacaacaaaaacgatgCTAGTGAGCCAAATAATGATGGAGTCAATGATGCCGATcgtaatgatgatgatgatgatgacgatgatgatgccGATGATGATAATGAGGCTGAGCATGCTGAACCATATGATGAACTTTTGGTGCAATTTCTTGATGAAGCAAATCAGATTgCTGAAGCCAGACTAGCAGCTAGAAGACATGCCAGAGCAGAAGCTCGTGAAATACGCATGCGAGAATTGGAACGCCAGCAGAAAGAACAGGAATCGAATGCGGATCGCGTTTTCGATATGCATTCAACGGTAACTGGAATAACACCACTGTCACACATGCGTCTTGGCCTGGGGAGTTCTCCTGTCACGGGTTTATTGAACTCAGCGAGAGGTAACTCCATGTCTTCCCGGCGCAGTAGCGAAGATTCTCTAGAGGAGGAAGGTCGCAGCTTAAGAGACATACGTCATGagttaaaaGATGTCGAAGAGCGGTTTCGTAAAGCAATGATAGCAAATGCTCAGTTGGATAATGATCGTGCCTCACAAACGTATCAAATACAGTTGCTAAAAGACAAACTGGAGGATATGGAAGAATCGTATTCACAATTACAGCgtgaatgcaaagaaaaaacacgaGATTGTAATGCACTGAAGAGATCGTTGGATAAACTAAATGAAGAGCTTAAACTGGTGCAGGGACAGCTAAACGAACGTGATACGCTGATAACAGAACAGGGTTTAATTATTGTGGCAATTGAAAATGAGGATGGCACTGATGCCAAACGTGCTCTAGTCAGTGTTGAAAATGCACAATTATTGGGATCGGTACAAGGTTCATTAGacGTTCGACTTAAGAAATTCACCGAAGAGAAACAACAACTGCATGCTGAAGTCCAACAGTTGCAAGAACAATTAGAAACGTATAAGAGTCAGGGCAAGGGACGAGGAAAAGGCAGTTCTTCTAACGGGCCCTTGGGCTCGGACGATGATGATTATGAAGCTCAAAGAGAAGCCAACAAAATCATATCGGATTACAAATACAAGTTACAAAAAGCTGAACAGGAAATCGCTAGTCTTCAGTCAAGCTTGGCACGCTCTGAAACACAAGTTATacgctacaaaagtacagcgGAAGCTGCCGAGAAAGCGGAGGCTGAACTTAAAATCGAAAGAAGGAAACTGCAAAGAGAgAATCGCGAAGCAATGGAAAAGCTGGAGGAGTTAGAAACATCAAATAATCATTTACTTAAACGTTTGGACAAATTAAAGAATGCCAAAAGTGCTCTGCTCAAAGATCTCTGA
- Protein Sequence
- MDTSSAVGRRRVNSRVNAEDQALDQIAKEHAHLTNVNSKNVVSTKNNTNNNNNSNAEVANDEIIEELFDFSDTDLKELDDIKNEQEIISNSNSCSSAKRLSEDSTKLEDNEKMNDECSEAHLQNMTSDNNNNRNKVEEKNNMQQPQVEPALISPSVDSVDKQDKDTAGNNELVSATAPTINNIISAPENVDKGATDKKQQNLIDPIMAEHGEENDLSSNKDDSKSYAQKSNSSFVSDSGNEVDNNDINFATSSDMKPEKTNNVSESSPLIGIPAEGSSSSSSSSSNNKNDASEPNNDGVNDADRNDDDDDDDDDADDDNEAEHAEPYDELLVQFLDEANQIAEARLAARRHARAEAREIRMRELERQQKEQESNADRVFDMHSTVTGITPLSHMRLGLGSSPVTGLLNSARGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTYQIQLLKDKLEDMEESYSQLQRECKEKTRDCNALKRSLDKLNEELKLVQGQLNERDTLITEQGLIIVAIENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKFTEEKQQLHAEVQQLQEQLETYKSQGKGRGKGSSSNGPLGSDDDDYEAQREANKIISDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMEKLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00655315;
- 90% Identity
- -
- 80% Identity
- -