Esuc000620.1
Basic Information
- Insect
- Epicampocera succincta
- Gene Symbol
- lrrfip2
- Assembly
- GCA_932527255.1
- Location
- CAKOBP010000003.1:4950064-4954610[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.14 1.4e+03 -1.6 0.2 46 83 97 133 76 149 0.63 2 3 3e-116 2.9e-112 375.0 27.1 1 299 346 642 346 643 0.93 3 3 0.14 1.4e+03 -1.6 3.7 220 245 671 696 646 717 0.47
Sequence Information
- Coding Sequence
- ATGCCACTGGATCAAAACTTGGCTGATAAAAATACTGTGACCACAGCAACAAAAACTAATAAAAAGAGCAAAAACAGCAAGAACAACAACAACAGTAACAATAAGAAATTCATTAAAAAAACATTGAAAATATCAAAAAATAAAAAGCAAACACATTTAACTAATGTCAATAATAAAAATGTGAATAACAAAAACAACGGTGGTGGCAGCAGCAACTGCGGCAACAACAACGCTGAAGTGGCAAACGATGAAATCATCGAGGAGTTGTTTGATTTTAGTGATACTGACTTGAAAGAACTCGATGACATTAAAAAGGAACAAAAAGTAATTTGCAATAGCAACTCATTCTCCAGTGCAAAGCTTTTAAGCGAAGACGGCAATAAATTAGAGGATAGTGGAAAGAAGCTTAATAAAGATTCAGGGGTTCAATTGGAAAATGTGACAAGTGATAATAACAATAATCGAAATAATGTAGGAGAAAACAATGTCCAAGAACCACAGGTGGAGGTGGCATTGATATCGGCTTCTGCTGACGTTAACGTGGATAAACAAAACCAAGATATCGCAGAAAGTAATGAATTAGTCACTACAACAGCAACAACAACTACTCACATAATCAGCGCAGAAGTGAATGTTGATAAAAGCGAAATTGATAAAAGCCAGCAAAAATGTATAGATCCACTTTTAAGAGAAGGTTGCGAGAAAAATGATTTATTGTCAAACAAAGACGATAGGAAAACCAACGCACAAATCTCCAATAGTTCTTTTGTTAGCGACCTTGTTGAAGCTGACAACAATGACATCAAATTTGCAACTTCTTCAGACATAAAATCTGACAAAACAAACAATACTTCAGAGTCATCGCCTTTGATTGGAATTCAAGAAGGTAGTAGTAGTAACAGTAGGAAAAACTATAGCGTTGAGCCGAGTTATAATGAAGGCAACGATGGTGATGGCGATGATTATGAGGAGGCTGAGTCTGCTGAACCATATGATGAGTTTTTAGTGCAATTTCTTGATGAAGCCAATCAGATTGCTGAAGCTAGATTAGCAGCTAGAAGACATGCTAGAGCAGAAGCTCGTGAAATACGTATGAGAGAATTGGAACGGCAGCAAAAAGAACAAGAGTCTAATGCAGATCGTGTTTTCGATATGCATTCCACGGTAACTGGAATAACACCACTGTCCCACATGCGTCTCGGCTTAGGGAGTTCGCCTGTTACAGGTCTATTGAACTCAACAAGAGCCAACTCTATGTCTTCAAGGCGCAGCAGTGAAGATTCTCTAGAGGAGGAAGGCCGCAGCTTAAGAGATATACGTCATGAGCTAAAAGATGTCGAAGAACGGTTTCGTAAAGCAATGATAGCAAATGCTCAGTTGGATAATGATCGTGCCTCACAAACGTATCAAATTCAGTTGCTAAAAGACAAACTGGAAGATATGGAAGAATCGTACTCACAACTACAGCGGGAATGTAAAGAAAAGACACGGGATTGCAATGCATTGAAAAGATCGTTGGATAAACTAAATGAGGAGCTTAAACTGGTGCAGGGTCAGCTAAATGAACGTGATACGCTGATAACAGAACAGGGTTTAGTTATTGTGGCAATTGAAAATGAGGATGGCACTGATGCCAAACGTGCTCTAGTCAGTGTTGAAAATGCACAGTTATTGGGGTCGGTACAAGGCTCATTAGACGTTCGACTCAAGAAATTTAGCGAAGAAAAACAACAGCTGCATGCTGAAGTCCAACAATTGCAAGAACAATTAGAAACGTATAAAAGTCAGGGCAAGGGACGAGGAAAATGCAATTCTTCGAATGGCCCCTTGGGTTCAGACGATGACGATTATGAAGCTCAAAGAGAAGCCAACAAAATCATATCGGACTATAAGTATAAGTTACAAAAAGCCGAACAAGAAATTGCTAGTCTTCAATCAAGTTTAGCACGTTCGGAAACACAAGTTATACGCTACAAAAGTACAGCGGAAGCCGCCGAAAAAGCTGAAGCCGAACTTAAGATCGAAAGGAGGAAACTGCAAAGAGAGAACCGCGAGGCAATGGAAAAACTAGAGGAGTTGGAAACTTCAAATAATCATTTACTTAAACGTTTGGACAAATTAAAGAATGCCAAAAGTGCTTTGCTTAAAGATCTCTGA
- Protein Sequence
- MPLDQNLADKNTVTTATKTNKKSKNSKNNNNSNNKKFIKKTLKISKNKKQTHLTNVNNKNVNNKNNGGGSSNCGNNNAEVANDEIIEELFDFSDTDLKELDDIKKEQKVICNSNSFSSAKLLSEDGNKLEDSGKKLNKDSGVQLENVTSDNNNNRNNVGENNVQEPQVEVALISASADVNVDKQNQDIAESNELVTTTATTTTHIISAEVNVDKSEIDKSQQKCIDPLLREGCEKNDLLSNKDDRKTNAQISNSSFVSDLVEADNNDIKFATSSDIKSDKTNNTSESSPLIGIQEGSSSNSRKNYSVEPSYNEGNDGDGDDYEEAESAEPYDEFLVQFLDEANQIAEARLAARRHARAEAREIRMRELERQQKEQESNADRVFDMHSTVTGITPLSHMRLGLGSSPVTGLLNSTRANSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTYQIQLLKDKLEDMEESYSQLQRECKEKTRDCNALKRSLDKLNEELKLVQGQLNERDTLITEQGLVIVAIENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKFSEEKQQLHAEVQQLQEQLETYKSQGKGRGKCNSSNGPLGSDDDDYEAQREANKIISDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMEKLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01376634;
- 90% Identity
- -
- 80% Identity
- -