Ssin017190.1
Basic Information
- Insect
- Stratiomys singularior
- Gene Symbol
- SMARCC2
- Assembly
- GCA_954870665.1
- Location
- OX940878.1:121266736-121271008[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-14 3.6e-11 44.1 0.2 3 44 619 660 618 662 0.96
Sequence Information
- Coding Sequence
- atgacAACAATCGGACCCAAAAAAGATGGCTCGCCCAACATTGAGTTTTATCAATCGCCAGAAAGTCTTCAAGGCTTCGAAACGATtcgtctgtggttgcaaaagaATTGCAAGAAGTGGATCACGGAGACTATTACTAAAGAGTCGTTAGCGCAGCTTCTCATCCAGTTCATGCAGTACTATGAGAACAAGCTGGGGAAGGCGGCGATAGAGCCACCGATAACCAAGATACCGATGAAGTGCTTCCTCGACTTCAAACCCGGTGGCGCACTTTGTGTAATTTTTGCAACCATGTATCGTTTTCAGCGCGGAAAGAAGTTCGATTTCAGCCTATCCAAAAACCCTTCGCGGAAAGATCCATACAATCAGTTGTTAGTCGAAATCGAAACCGCCTTGCTCGATGATGGATTTTTCCGACTTCCATTCGTTTACATACGCCCGGAAGTTGACAAGCAATTGGCGAGTCGCATTAAGGATATTTTAGTAAGTCGGCGAGTCGAAGTGCTGGACTACGAAGACGGAGCTTCGCATGTAATTTACCCCATCGTTGATCCTTATTCAGATGATTATGCCCGACCCACATTTAAGCGCGGCCAATACGTTATGATGCATTGGTATTACTTCCCAGAGTCCTATGACACGTGgactttgaatatatttgatctGCCGGAACGTATTCCAGACAGTCCACCGTCGCCGGCTGAACGTTGGCGTGTGACTGCTTCGTGGGTGCTCGACTTGGAGCAGTATAACGAGTGGATGTCTGAAGAAGATTACGAAGTAGATGAACAGGGAAAGAAGAAGTTACATAAAATGCGTTTGTCCGTTGACGATCTCATCACAAACGGAGATGACAAGAAACGAgttgcaaataaacaaaaacgacGCAGATCTCCGTCCCCTGTAATGAAAGCCGGAAAGCGTAAACgCTCCCCAGCAGTTTACCAAAAGAAACCCCGCAGTGGGGATGGAGACGATGATGAAGACTTAACTCGTGATATGGACGATCCACAACCTGAACCAAATATCACTGAAGTGACCAAAATGGCTTCTGGCCAGTCGACGGCAAGTCCTGCTCCTGCAACCAACTCCAAACATCGAGACAATGAATTGATGCCTATTAAAGGCGGAACCGTCACGGATCTCGACGAGGATATGGAGCGCACGGCTGAAGACTCGCAGACGGGAAAAACAAGCGACAACAGCAACACTCAAGAGTTTCAGCCGAAAGAAGACATGGAAGATAATGTCACAGAACAAACTCATCATATTGTTGTCCCCTCGTATTCTGCTTGGTTCGACTATAATTCTATACATGTGATTGAAAAGCGAGCCATGCCCGAGTTTTTCAACGGCAAGAACAAGTCCAAGACTCCTGAAATTTACATGGCATACCGTAATTTCATGATTGACACATATCGACTAAACCCTACCGAATATTTGACGAGTACGGCCTGCCGCAGGAATTTGGCTGGAGACGTATGCGCCATTATGCGCGTGCATGCATTTCTGGAGCAGTGGGGACTAATCAACTACCAGATCGATGCTGACTTGCGACCGACACCAATGGGTCCTCCGCCAACCTCGCATTTCCACATTTTAAGTGATACACCGTCCGGACTGCAGCCGGTTAATCCTCAAAAAACACCTCAGCCCACAGCTGCTAAGGCCCTGATCGATTTGGATAAGAAACCAAAAGAAGGAGAAAGCGCACCATCAGGATCTGCATCAGCAGCAATCAAAGTTGAATGCGGAACGGAGGCCACGGCCGGCCAGCAATTTGGCTTAAAGTTGGACCAGTATGCAAAGAAGCCAGCGGCTATGAAAAACAGAACTGCCGCAAATATGGTGCGAGAGTGGACGGATCAAGAGACGCTGTTGCTCCTAGAAGGATTGGAGATGTACAAGGATGATTGGAATAAGGTTTGTGAACACGTCGGTACGCGTACCCAGGACGAATGCATCTTACATTTCCTTCGGCTACCAATCGAAGATCCATACCTCGAAGACGACGGTGGTTTTCTGGGACCATTAGCTTATCAACCCATTCCATTCAGTAAATCGGGAAATCCAATAATGTCGACCGTGGCATTTTTAGCGTCAGTGGTAGACCCTCGAGTTGCTGCAGCTGCTGCAAAGGCGGCAATGGAAGAGTTTGCTGCTATCAAGGACGAAGTCCCATCATCAATTATGGATGCACACTttaaaaatgtggaaaagtCAGGTTTCGGTGGAAAATTCGATCCGTACGCTGGTCTAGCTAACAGCGGCATCGCAGGGACAGGGCCCGACAAAGAGGACGACGATATCACAAAAGCTAACGCAAGTCAGGATGAGGAGATGAAAGACTTAAGTAAAAAAGATGCAGttgaaaaagacaAAACCGATTcgcaaaatgatgaaaataaaaacacagacACACCTCTTTCCTCCTCAACAGACAAGACATCTGCGGATGTTAAGTCAGAGAAGACGGGCGACGAGAAGGATGTAAAGACTGAAGAGTCTTCAACGGAAAGTTCACAATCGACGGCTGCTAGCACAGAGGCCACAAATGGGTCTAAGGAAAATGGTGAATCGGCTCGTAAAGTTTTCAACGAAGCCAATTTGCAAACGGCTGCAGCGGCCGCTCTTGCTTCAGCAGCTGTAAAAGCAAAGCACCTTGCAGCGCTTGAAGAACGCAAAATTAAATCGTTAGTTGCTCTTCTGGTTGAAACGCAAATGAAGAAACTCGAAATCAAATTAAGACATTTTGAAGAGCTCGAAACAACAATGGAGAAAGAACGAGAAGGTCTTGAGTATCAGCGGCAGCAATTGATCACTGAGCGTCAACAATTCCATTTAGAACAGTTGAAAGCTGCCGAGTTTCGTGCTCGCCAGCAAGCACACCATCGATTGCAACAGGAACAGCAAGGCCAGTGGCAGGGAGGTGCAAGTGCAGCCGTGCCAGGCGGTCCTGGAACGCCAAATAGTAGCTCAAACTCTTCATCTACAGTCCAACAATCCAGCTCTCAGCTTCCAAGTGGCGCGTCTACAGAAACTCAACAAATTCCTAGTGGAGCTGAGCCGAATCAACCTCAAATTGGACAGCAATCAGCGCCAACACCTCCTTCAAGCGGTCTCCCTGGAACACCATCGGCCAACCCGACATCATTGCAAACCTAA
- Protein Sequence
- MTTIGPKKDGSPNIEFYQSPESLQGFETIRLWLQKNCKKWITETITKESLAQLLIQFMQYYENKLGKAAIEPPITKIPMKCFLDFKPGGALCVIFATMYRFQRGKKFDFSLSKNPSRKDPYNQLLVEIETALLDDGFFRLPFVYIRPEVDKQLASRIKDILVSRRVEVLDYEDGASHVIYPIVDPYSDDYARPTFKRGQYVMMHWYYFPESYDTWTLNIFDLPERIPDSPPSPAERWRVTASWVLDLEQYNEWMSEEDYEVDEQGKKKLHKMRLSVDDLITNGDDKKRVANKQKRRRSPSPVMKAGKRKRSPAVYQKKPRSGDGDDDEDLTRDMDDPQPEPNITEVTKMASGQSTASPAPATNSKHRDNELMPIKGGTVTDLDEDMERTAEDSQTGKTSDNSNTQEFQPKEDMEDNVTEQTHHIVVPSYSAWFDYNSIHVIEKRAMPEFFNGKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQPVNPQKTPQPTAAKALIDLDKKPKEGESAPSGSASAAIKVECGTEATAGQQFGLKLDQYAKKPAAMKNRTAANMVREWTDQETLLLLEGLEMYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLAYQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPSSIMDAHFKNVEKSGFGGKFDPYAGLANSGIAGTGPDKEDDDITKANASQDEEMKDLSKKDAVEKDKTDSQNDENKNTDTPLSSSTDKTSADVKSEKTGDEKDVKTEESSTESSQSTAASTEATNGSKENGESARKVFNEANLQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEKEREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQGQWQGGASAAVPGGPGTPNSSSNSSSTVQQSSSQLPSGASTETQQIPSGAEPNQPQIGQQSAPTPPSSGLPGTPSANPTSLQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01043649; iTF_01088287; iTF_01127327; iTF_00322401; iTF_00999525; iTF_00202513; iTF_00203476; iTF_00324278; iTF_00793461;
- 90% Identity
- iTF_01088287;
- 80% Identity
- -