Cfor033784.1
Basic Information
- Insect
- Chloromyia formosa
- Gene Symbol
- SMARCC2
- Assembly
- GCA_964017055.1
- Location
- OZ024817.1:77364518-77368211[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.8 2.3e+04 -3.2 0.2 37 45 122 130 121 131 0.84 2 2 1.3e-14 3.5e-11 44.2 0.2 3 44 551 592 550 594 0.96
Sequence Information
- Coding Sequence
- ATGAAATGTTTCCTGGACTTCAAGCCGGGCGGAGCTTTATGCGTGATGTTTGCAACCATGTATCGATTTCAACGAGGCAAGAAGTTCGATTTCAGCATTAGCAAGAATCCCTCCCGAAAGGATCCCTACAACCAGTTGCTAATCGACATTGAAACGGCTCTCCTGGAAGCGGACTGTTTTCGCCTGCCATTCGCCTACATTCGTCCCGAATTGGACAAACAATTGGCCGCTCGTGTCAAGGAAATTCTGACTAATCGACGCGTTGAAATCGTCACCGACGAAGAAGAGGCCACACATGTGATCTATCCCATTATTGATCCGTATCCCGATGAATACGCTCGACCCATGTTCAAGCGCAATCAGAATGTAATGTTGCATTGGTACTATTATCCCGAGTCGTATGACACGTGgacattgaacatttatgattTGCCGGAGAACATACCGGACAGTCCAGCGCCACCAGCTGAACGTTGGCACGTTTCTTCCTCGTGGGTCCTGGACATGGAGCAATTCAACGAGTGGATGTGCGAGGAGGACTATGAAGTGGACGAGAATGGTAAGAAGAGGATGCATAAAATGCGAATGTCAGCCGATGATCTGATTACCAATGACGACAGGCGTCGGGGCAAGACAAAGCGGCGTCGATCACCGTCGCCCGTAACGAAGGCCGGCAAGCGTAAACGCTCGCCAGCAGTTTTTCAAAAGAAATCTCGTAGTGGTGACGGCGACGACGAGGAAGATTTAACGCGCGACATGGAGGATCCGCAATCCGAGCCGAATATAACGGAGGTGACGAAACTAACAAGTGGCCAATCGACAGCAAGTCCAGCACCGGCTACAAATTCCAAGCACCGCGACAACGAGCTGATGCCCATCAAAGGTGGCACGGTCACGGATCTGGACGAAGACATGGAACGCACGGCGGAAGACTCACAAACGGGCAAGACGAGCGAAAATAGCAACACGCAAGAATTCCAACCGAAAGAAGACATGGAAGACAACGTCACGGAACAAACCCATCATATTGTGGTGCCGTCGTATTCGGCCTGGTTCGATTATAATTCGATTCACGTTATCGAGAAGCGAGCCATGCCCGAGTTTTTCAACGGTAAGAATAAGTCAAAAACACCGGAAATTTACATGGCATATCGAAACTTTATGATTGACACGTATCGTCTTAATCCGACCGAGTATTTGACGAGCACGGCGTGTAGACGAAATTTGGCCGGCGATGTGTGCGCCATAATGCGTGTGCATGCCTTCTTGGAGCAATGGGGTCTGATTAACTATCAAATTGATGCTGATCTACGTCCCACGCCGATGGGCCCACCGCCCACATcgcattttcatattttgagTGACACGCCATCCGGCTTGCAGCCAATTAATCCACAAAAGACGCCACAACCGTCGGCTGCCAAGGCGCTATTGGATCTTGACAAGAAGCCCAAGGAAGGGGAAATTGCAACGGCTGCTACTGCAGCTGCTGCGGCGGTGGTGGGAGCGACAGGCACACCGGGAGCCATCAAGGTGGAAGCAGGCGTACCTAGCGAAATTCCAACCGGACAACAGTTCGGATTGAAACTTGACCAATATTCGAAAAAGCCGGCTGCAATGAAGAATAAAACGGCTGCGAATATGGTGCGAGAGTGGACCGATCAGGAGACATTGCTACTGCTCGAAGGTTTGGAAATGTACAAGGACGATTGGAATAAGGTGTGCGAACATGTCGGCACACGAACACAAGACGAATGCATTCTGCACTTTTTGCGATTGCCAATCGAGGATCCATACTTGGAGGATGACGGCGGCTTTCTCGGGCCACTGGCCTATCAGCCCATTCCATTCAGCAAGTCGGGCAATCCCATCATGTCGACGGTTGCATTCCTGGCCTCGGTCGTCGATCCAAGGGTGGCTGCCGCTGCTGCCAAGGCCGCCATGGAGGAGTTTGCAGCCATTAAGGATGAGGTGCCGTCCTCCATCATGGATGCTCACTTTAAAAACGTCGAAAAGTCTGGATTTGGCGGAAAATTCGATCCGTATGCGGGTCTGGCGAATAGCGGCATTGCAGGAACAGGTCCGGATAAAGAAGATGaggaaaatacaaataaaacaaatacaAGTCAAAATCAAGATGAAGAAATGAAAGATATTAGTAAAAAAGATGCTGACAAAGTTGACAAAGAAAAAACCGACAATACGCAAAACGATGAGAATAAAAAACAAGACACTCCCATTTCTTCAACAGACAAAACATCCACGGATGTTAAGTCAGAGAAGACAGGTGGGGCTGGTGAGGAGAAGGACGTCAAGACCGAAGAATCGTCAACAGAGTCATCGCAATCAACGGCCACAAGCACAGAAGCTACAAACGGTTCCAAGGAGAATGGTGAAACAGCACGTAAAGTATTCAACGAAGCCAATTTACAGACAGCCGCGGCAGCGGCTCTAGCATCGGCTGCGGTCAAAGCCAAACATTTGGCCGCATTGGAAGAGCGTAAAATCAAATCTTTGGTCGCCCTGCTCGTTGAGACACAAATGAAAAAATTGGAAATCAAATTGAGACATTTCGAAGAGCTGGAGACAACAATGGAGAAGGAGCGCGAGGGTCTAGAGTATCAGAGGCaacaattgatcaccgagcggCAGCAATTCCACTTGGAGCAGTTGAAGGCGGCCGAGTTCCGGGCACGTCAACAGGCCCATCATAGACTGCAACAAGAACAACAGGGCCAATGGCAGGCGAATCCAAACGCTGCTTCGACACCAGCCGGTGGTACTGCTGGTACGACTCCGTCTGTCGCTACGACGGCTAACACCAATGCAACTGCACCGCCCGCCGCTGCTCCGGTCACAAATGCTCAACCCGTTGCTCCTGCTACAGATTCGCAACAAATGTCTGTCACTGCAGAGACTTCAAATCAACAGCAGCCACTGACTCCAGCGGCTACAGGAGCCGCTGCACCAGCAAATTAA
- Protein Sequence
- MKCFLDFKPGGALCVMFATMYRFQRGKKFDFSISKNPSRKDPYNQLLIDIETALLEADCFRLPFAYIRPELDKQLAARVKEILTNRRVEIVTDEEEATHVIYPIIDPYPDEYARPMFKRNQNVMLHWYYYPESYDTWTLNIYDLPENIPDSPAPPAERWHVSSSWVLDMEQFNEWMCEEDYEVDENGKKRMHKMRMSADDLITNDDRRRGKTKRRRSPSPVTKAGKRKRSPAVFQKKSRSGDGDDEEDLTRDMEDPQSEPNITEVTKLTSGQSTASPAPATNSKHRDNELMPIKGGTVTDLDEDMERTAEDSQTGKTSENSNTQEFQPKEDMEDNVTEQTHHIVVPSYSAWFDYNSIHVIEKRAMPEFFNGKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQPINPQKTPQPSAAKALLDLDKKPKEGEIATAATAAAAAVVGATGTPGAIKVEAGVPSEIPTGQQFGLKLDQYSKKPAAMKNKTAANMVREWTDQETLLLLEGLEMYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLAYQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPSSIMDAHFKNVEKSGFGGKFDPYAGLANSGIAGTGPDKEDEENTNKTNTSQNQDEEMKDISKKDADKVDKEKTDNTQNDENKKQDTPISSTDKTSTDVKSEKTGGAGEEKDVKTEESSTESSQSTATSTEATNGSKENGETARKVFNEANLQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEKEREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQGQWQANPNAASTPAGGTAGTTPSVATTANTNATAPPAAAPVTNAQPVAPATDSQQMSVTAETSNQQQPLTPAATGAAAPAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01375755;
- 90% Identity
- iTF_00999525;
- 80% Identity
- -