Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_951812415.1
Location
OX638312.1:103192796-103209566[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-14 3.1e-11 44.1 0.2 3 44 615 656 614 658 0.96

Sequence Information

Coding Sequence
ATGGTTTCGATCGGTCCAAAAAAGGACGGTTCACCGAATTTGGAGTATTTTCAATCGCCAGAATGTCTACAAGGCTTCGAAACGGTTCGCTTGTGGCTgcagaaaaattgtaaaaagTGGATTGCCGAGACGATTACGAAAGAGTCACTCTCGCAACTGCTCATGCAGTTTATGCAGTACCATGAAAACAAGTTGGGCAAGAACGCGATGGAGCCGCCAACCACAAAAATACCGATGCGCTGTTTTTTGGATTTTAAATCGGGAGGTGCATTGTGCGTTATTTTCGAAACTATGTACCGTTTTCAGCGAGGTAAAAAGTTTGACTTTAACATAAGCAAAAATCCATCAAGAAAGGATCCTTATAATCAACTACTGATGGAAATCGAGGCAGCGCTTATCGAAGCTGACAGCTACAAACTTCCATTCGTCTACATTCGTCCGGAAGTCGAAAAACTACTAGCTTCTCGAATCAAGCAAATTTTGGACAGTCGGCGCGTTGAAATCCTTAGCGATGAGGATGATGCAACTCATGTAATTTATCCCATTGTTGATCCGCACTCGGAAGAGTACGCTCGACCGACATTCAAACGAGGATCGAATGTGATGTTGCATTGGTACTATTTCCCGGAATCGTATGATACATGGGCACCGAACAGCTTTGATTTGCCGGATAATGTTCCGGAAAATCCACCATCTCCGTCAGAACGGTGGCGAGTTTCAGCTTCATGGATACTCGATTTGGAACAATATAACGAATGGATGGCTGAAGAAGACTACGAAGTGGACGATCAAGGTAAAAAGAAGATGCATAAAATGCGTTTGTCCGTTGAAGATCTTATGTCGAATGGTGACGATAAGAAACGTGCTGGAAACAAGCAGAAGAGACGCAGGTCTCCGTCGCCACTCTCGAAGTCGGGAAAAAGGAAACGATCGCCGGCAGTCTTTCAGAAGAAATCGCGTAGCGGAGACGGAGACGACGATGAAGATTTGACCCGGGATATGGACGATCCACAACCAGAACCGAACATAACCGAAGTTAGTAAAATGGCATCTGGACAATCGACGGCAAGTCCAGCTCCGGCAACCACGACTAAACGCGATAATGAATTGTTGCCGCTTAAAGGAGGCACCGTTACTGATCTCGACGAGGACATGGATCGTACTGCTGAAGACTCACAAACTGGGAAAACCAGCGATAACAGCAATACGCAAGAATTTCCACCCAAGGAAGACATGGAGGACAATGTTACCGAGCAAACTCATCACATTGTCGTTCCGTCATATTCAGCTTGGTTCGATTACAACTCGATTCATGTAATTGAAAAACGCGCTATGCCTGAGTTCTTTAATgccaaaaataaatcaaaaactcCGGAAATTTATATGGCATATCGGAATTTTATGATTGACACTTACCGGTTGAATCCAACCGAATACTTGACGAGCACCGCATGCCGGAGGAATTTAGCTGGCGATGTTTGCGCTATAATGCGAGTTCATGCATTCTTGGAACAGTGGGGCCTAATCAATTATCAAATTGAAGCTGACTTGCGACCGACACCAATGGGACCACCACCTACTTCTCATTTCCATATTTTGAGCGATACACCGTCTGGTCTACAACCGGTTAATCCTCAAAAAACACCACAGCCGTCGGCAGTTAAAGCTCTCTTCGATCTCGACAAAAAGCCAAAAGAAAGCGAACTGGCGGCAGCTCCACAACATCCAATcccagtgaaaatggaaggtgTCGAAACTGGCGGTCAATTTGGATTGAAACTCGATCAATATACGAAGAAGCCGGCCGCCATGAAAAACAAAACGGCCGCTAATCTGGTCAGGGAATGGACGGATCAGGAAACATTGTTATTGCTCGAAGGACTAGAAATGTACAAGGACGACTGGAATAAAGTTTGCGAACACGTTGGAACACGGACACAAGATGAATGTATTTTGCATTTTCTACGATTGCCCATCGAGGATCCCTATTTAGAGGACGATGGCGGTTTCTTGGGACCCCTTGCATATCAGCCTATTCCATTTAGTAAATCGGGCAATCCGATTATGTCGACTGTGGCATTTTTAGCTTCGGTGGTCGATCCGCGAGTTGCAGCGGCAGCAGCTAAAGCTGCCATGGAAGAATTTGCGGCCATAAAGGACGAAGTACCGTCTTCGATAATGGACGCACACTTTAAGAATGTCGAGAAATCTGGATTTGGCGGAAAGTTTGACCCGTATGCCGGCTTAGCAAACAGCGGAATTGCTGGGACCGGTCCAGATAAGGAAGAAGATGAAAGCGCCAAGGCAAATGCAAGTCAAGACGAAGAAATGAAAGATTTAAGTAAAAAAGAAACAGCCGAAAAAGATAAAACCGATTTACAAACCGCCGAACCCAAAACTAAAGATTCTCCTTCCCCGTCAGAAAAAGCTTCTTCGGCTGATGTTAAACCGGAAAAGTCTACTGACGAGAAAGAAGTAAAAACGGAAGAATCATCAACAGAGAGTTCACAGTCGACCGCTGCAAGTACGGAAGCCACAAACGGATCAAAGGAGAACGGCGATTCTACGCGTAAAGTATTCAACGAGGCAAATTTACAAACAGCAGCTTCTGCAGCTCTTGCTTCGGCTGCCGTTAAGGCAAAACATTTAGCTGCACTTGAAGAACGCAAAATAAAATCTCTTGTTGCACTTCTTGTCGAAACGCAAATGAAAAAGCTCGAAATTAAATTGCGTCACTTTGAAGAGCTCGAAACAACAATGGAAAAAGAGCGAGAAGGCTTAGAATATCAAAGACAACAACTGATTACCGAACGGCAACAATTTCACTTGGAACAGCTGAAGGCTGCCGAATTTCGGGCTCGACAACAAGCTCATCATCGTTTGCAGCAAGAGCAGCAAGGACAATGGCAAGCAAATCCAACTGGTCCGCCAGTTCCGGGTGCTGCTATTGCTCCGCCCGTTACTAATCCAGGTACCACGCCTCCAGTGCCGGCTGTACCTGCACAAATCACAAATGTAACATCTGCAGAAGCACAACCAGTTAATCCTAGTGAAATGACCAGTCCACCACCAATAACTCAACAACCGACACCGCCAGTACTACCAGCCACTGTTCCACCCGTAACTCAGCCAAATCCACCAGCACCTATGCAAACATAA
Protein Sequence
MVSIGPKKDGSPNLEYFQSPECLQGFETVRLWLQKNCKKWIAETITKESLSQLLMQFMQYHENKLGKNAMEPPTTKIPMRCFLDFKSGGALCVIFETMYRFQRGKKFDFNISKNPSRKDPYNQLLMEIEAALIEADSYKLPFVYIRPEVEKLLASRIKQILDSRRVEILSDEDDATHVIYPIVDPHSEEYARPTFKRGSNVMLHWYYFPESYDTWAPNSFDLPDNVPENPPSPSERWRVSASWILDLEQYNEWMAEEDYEVDDQGKKKMHKMRLSVEDLMSNGDDKKRAGNKQKRRRSPSPLSKSGKRKRSPAVFQKKSRSGDGDDDEDLTRDMDDPQPEPNITEVSKMASGQSTASPAPATTTKRDNELLPLKGGTVTDLDEDMDRTAEDSQTGKTSDNSNTQEFPPKEDMEDNVTEQTHHIVVPSYSAWFDYNSIHVIEKRAMPEFFNAKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIEADLRPTPMGPPPTSHFHILSDTPSGLQPVNPQKTPQPSAVKALFDLDKKPKESELAAAPQHPIPVKMEGVETGGQFGLKLDQYTKKPAAMKNKTAANLVREWTDQETLLLLEGLEMYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLAYQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPSSIMDAHFKNVEKSGFGGKFDPYAGLANSGIAGTGPDKEEDESAKANASQDEEMKDLSKKETAEKDKTDLQTAEPKTKDSPSPSEKASSADVKPEKSTDEKEVKTEESSTESSQSTAASTEATNGSKENGDSTRKVFNEANLQTAASAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEKEREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQGQWQANPTGPPVPGAAIAPPVTNPGTTPPVPAVPAQITNVTSAEAQPVNPSEMTSPPPITQQPTPPVLPATVPPVTQPNPPAPMQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01375755;
90% Identity
iTF_00202513; iTF_00324278;
80% Identity
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