Smel034255.1
Basic Information
- Insect
- Stenurella melanura
- Gene Symbol
- BTBD9
- Assembly
- GCA_963583905.1
- Location
- OY757312.1:27214401-27234554[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.5e-06 0.0076 18.7 0.0 6 108 136 231 132 233 0.85 2 4 8.7 1e+04 -1.1 0.0 62 100 376 416 334 421 0.80 3 4 1e-15 1.2e-12 50.2 0.1 20 107 624 713 617 716 0.91 4 4 2.7 3.1e+03 0.6 0.0 79 109 717 747 713 748 0.88
Sequence Information
- Coding Sequence
- ATGGCACGATCAGACTTCATTGGAACCTGGGAAGTAATACACTGTGAGCATGTTAAAGGAACTTATATTGGCAATTacgataaatatattaaatgtttagaAGGAATTAGATTTCGTCTTGACGAAAATGGAGATGTTACGTGGACTGTTCCCGAAGAACTAAAATCTGTGCCACTATTTAGTTGTGAAACTTACGAACTTTATGTCCATGCTGGAAGAGCAGGGCTTGTTTTGCGTTTTGGTGCCTATGCGGGTCATGTATTTGAGTTTACAcCTGATAAGGGACGGCCAAAAGAAAGTGTCACGTTAACATGTGAAGGACTGTGTACATTACGTTGTATTAGGGTTAATGATGACACACCAGAAGTTAACTATAGTATTCCGTTTACGTTGCTACCCGCTTTGGAAGATGGCTACTTCTCGGATATAACAATAACTTCTtcaaataataaacaaTTTAGAGTACATTCTACAATCCTCGAATTACAAGGAGATGATATAAATTGGAATTCTGACCCACCGCCGTTTAGCAATATTTCTGAAGATGTTCTAGGAACTATTCTACATTTTCTCTACTCTGAATGTTTGCCTGAGAATTTAAAGGAAGAGACAGTACGACAGGTTATAACAGTTGCTTCACCTTATGTTTCACTGAATAGGCTAGTTGAGAATTGCCAATTGTACTTGAAAAACACGGCTTTAAAGCAGCaaatcataggaCTAGCAAACGATATGCACTCATGCATGAACCAAATAATCGATCGATTTCACCCAAGAAGCAATCATTCATCATCAGAGAACATCGTAACTAATCCTGCAAAGTTGTGCTTTGTAGTTAAACAATCTATTAGAGATGCTGCTGTAGctGGTGCAAAATTGCTACTCCTTTGcgatttatttacaaaaagaaaaaatgaattatctagAAATGAACGACATGAAATTATCCGTTATGCAAAATCGAGGCTTCCGATATTTCTCACTCAAATCACAAGGTTCTTGCAGGCCCTTAAAAATACGTTTAGTTCCATGTCACCTGCTCAAAGAATTGAGATTGCGACGTTTTTAGTGCCAGAgATTGAGGTAATTTTGGATACAATCTCTATGTTAATAGTTCACGTTGACGAGGCCTTACAGCAAATAATTCAAGGTCTATTTATGCCAGACCTTAACAAAAGTAAAACTAATGTTGGAGATATGTTGTCGAAGACATTGAGAAATCTCTTGCATATAAGGGAATTGACGAAATTGAATACCTTTCATGAACATATCACTTGCAGCCTTGGATTATTGGTGCATAAAAAGGAAAacttcaatcagatgtcatccTCTCAAAAGGTACGTTCCATAGCAAGGAACTTGGAACAACTAATAGAGGAACTTCCAATATTTTTAATAAGGCTAGAAGAAACGACATCTGCATTTGATGATAAATTGGATTGGAGTGATTTTAAGTTTTGCTTTAAAGTTGGAACAAGCAAAGtgTCTGACATCCTTCACAAATTAATAGCCCATAGCGACTCTCTTCAAGATGTGATGTTACAAGTCTGTGAATTGGTCCAAAGGGATGCGTTTACGCAAACGTTGCAATGTTTAGGCCTTTTAAACGCAGCAGCCTCTTCGTCACACACCAGTGATGCTCCTAAAATGACTAAGAGTTCTTCTTATTCCACCCCTAAACACCATGGTTATAAActTAATTTAGTAGAATCCTTATGTGCTCCACCAGAAACGGCAAACAGTTTACTGTCGAAATTGTGCCTCCAGCTGCTCAGAAATGAAGAAAAGGCAGATATGGAATTCGAGGTAATAGGTAGTAATTTAAATTTAGAACAGACTGAGGAAGGGGCGACGCCCAACGTTGAAGAAAAGTGTGTTATTAAATCCCATAGGGTTATCGTTGCAGCTCGATGTGACTGGTTTCGAAGGGCTTTGTTATCCGGAATGAGGGAATCGATAGACAAgaaaataataatacatGACACTAGTCCATTTTTATTTAGAATACTACTGGAATACCTGTACAGTGGCAGAATAAAACAGGATTCCCTCTCCACCGAACAATTTGTAGAATTATTGTTACTTAGTGATAGATATGAAATGGACTCATTAAAGCAAACCTGTGAATATGCTCTACTGTCTTGTATTGATGCTGAGTCTGTGTTATATTTTCTAAGCATGGCCGATCAGTACAACGCCAGAATATTACGGAGTCGCTGTTTGCATTTCATATCTCAACACCATGAACTGACAGAAAGTGAAGAATTCTTCGAACTTCCCATATCACTGCAAGCAGAAATATTTGATTGTGTTTGGACTCAACCTAGTGGTAGGCAATCTGAAATGTTGGATTATACTTCGTCTGCCACCAGTAATTCGTTACATTATAATAGCCCAGGTGCACCTGATTTAAATAGTGCCGTTGAATCCATGTTGCTCACCCCAGAATTAGACCCTAACCATTCCAACACCAGTTCACTAGAAGATCTACGTTTAGAACAAAATTCGACTCGAATGGAGAGTTGCCTGAGACAGATGCGAGACATCGTTGGTGAAACAGCATCGAGAGAAAGTCTAGTACAAGTCATCCTAGCTGCAGATTTCGATTTGAGGAGAGCCGTAAATTATTATTATGCAAGGAACAGCGGAGAGGAGTAG
- Protein Sequence
- MARSDFIGTWEVIHCEHVKGTYIGNYDKYIKCLEGIRFRLDENGDVTWTVPEELKSVPLFSCETYELYVHAGRAGLVLRFGAYAGHVFEFTPDKGRPKESVTLTCEGLCTLRCIRVNDDTPEVNYSIPFTLLPALEDGYFSDITITSSNNKQFRVHSTILELQGDDINWNSDPPPFSNISEDVLGTILHFLYSECLPENLKEETVRQVITVASPYVSLNRLVENCQLYLKNTALKQQIIGLANDMHSCMNQIIDRFHPRSNHSSSENIVTNPAKLCFVVKQSIRDAAVAGAKLLLLCDLFTKRKNELSRNERHEIIRYAKSRLPIFLTQITRFLQALKNTFSSMSPAQRIEIATFLVPEIEVILDTISMLIVHVDEALQQIIQGLFMPDLNKSKTNVGDMLSKTLRNLLHIRELTKLNTFHEHITCSLGLLVHKKENFNQMSSSQKVRSIARNLEQLIEELPIFLIRLEETTSAFDDKLDWSDFKFCFKVGTSKVSDILHKLIAHSDSLQDVMLQVCELVQRDAFTQTLQCLGLLNAAASSSHTSDAPKMTKSSSYSTPKHHGYKLNLVESLCAPPETANSLLSKLCLQLLRNEEKADMEFEVIGSNLNLEQTEEGATPNVEEKCVIKSHRVIVAARCDWFRRALLSGMRESIDKKIIIHDTSPFLFRILLEYLYSGRIKQDSLSTEQFVELLLLSDRYEMDSLKQTCEYALLSCIDAESVLYFLSMADQYNARILRSRCLHFISQHHELTESEEFFELPISLQAEIFDCVWTQPSGRQSEMLDYTSSATSNSLHYNSPGAPDLNSAVESMLLTPELDPNHSNTSSLEDLRLEQNSTRMESCLRQMRDIVGETASRESLVQVILAADFDLRRAVNYYYARNSGEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01310709;
- 90% Identity
- iTF_01290542;
- 80% Identity
- -