Rfun013308.1
Basic Information
- Insect
- Rosalia funebris
- Gene Symbol
- Btbd9
- Assembly
- GCA_037954035.1
- Location
- JAZFAV010000008.1:2406789-2420325[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.009 8.2 8.4 0.0 6 30 137 161 133 166 0.90 2 5 0.00029 0.27 13.2 0.0 57 108 178 232 170 234 0.89 3 5 0.63 5.8e+02 2.5 0.1 25 101 336 417 326 423 0.69 4 5 5.5e-15 5e-12 47.7 0.0 23 108 626 713 621 715 0.92 5 5 7.8 7.1e+03 -1.1 0.0 82 106 719 743 713 746 0.85
Sequence Information
- Coding Sequence
- ATGGCTAGTAGAATAGCTTTTACTGGAACTTGGGAAGTGATAAAGTGCGAATATGTTAAAGGGACGTACATCGGAAACtatgataaatacattaaatgttTAGAAGGGATTAAATTCCGTTTGGACGAAAATGGGGACGTTACGTGGTTTATTCCTGAAGAGCTGAAATCAGTACCCTTATTCAGTTGTGAGACGTACGAGCATTATACACACGCTGGAAGGCAAGGGGTTGTTCTGCGATTCGGAGCATATGCAGGACATGTTTTTGAATTTGCCtcAGATAAAATTTTACCAGAGAGTAGCGTAGTCCTAACGTGCGAGGGACTATGCACCTTGCACTGTGTTAGAGTCAACGATGACGCACCGGAAGATACTCATAATATCCCTTTCACTCTGCTTCCTGCACTGGAAGACGGGTACTTTTCGGATATAACAATAACTTCTTCTAATAACAAACAATTTAAAGTACATTCAACGGTTCTTGAAGGGCAAGGGACTGATATTAATTGGAATTCCGATCCGCCGCCCTTTAGTAATATTTCAGAGGACGTTTTAGGGACTATCCTCCATTTTATGTATTCCGAGTGCTTGCCAGAGAATTTGATGGAGGAGACGGCACGTCAAGTGATAACGGTTGCCTCTAATTATGCTTCGTTGGGCAGGCTGGTTAATATTTGTCAGTTATACTTGAAGAATATGGCTTTAAAACAACAGATCATAGGGCTGGTGAACGATATGCACTCTTACATGAACCAGATCATCGACAGATTTCACCCCAGAGCCAACCATGTGGCAGAGAATATCGTGGCGAATCCTGAAAAGCTGTGCTTCGTCGTGAAGCAGTCTATTAGGGATGCTGCCGTAGCCAGCGCCAAGCTGTTGCTTCTCTGCGATTTATTCACGAAACGAAAGAACGAGCTGTCGAGGAACGAGAGGCACGAAATTATCAGGTATGCCAAGTCGAGGCTTCCGATATTCTTGACTCAGCTTACGAGGTTCCTGCAGGCGCTCAAGAACACGTTCAGTTCCATGTCGCCTGTCCAGAGGATGGAGATTGCCACGTTTTTAGTGCCCGAGATTGAAGTGATTCTAGACACTATATCAATGTTGATAGTACACGTCGAAAAGGCGTTACAACAGATAATCCAAGGTCTCTTTACGCCCGACGTTACCAAGTGCAAGAGCAACGTCGGCGACATGCTGTCTAAGACTCTAAGGAACCTCTTGCACATCAGGGAGCTGACGAAATTGAACACGTTTCACGAACACGTTACCTGCAGCCTCGGGCTGTTGGTACACAAAAAAGAAAATTTCAACCAAATGTCGTCATCGCAGAAGGTGCGTTCGATAGCCAGGAACTTAGAACAACTAATTGACGAGCTTCCTATATTTTTGATACGCCTGGAGGAGACGACGGCCGCTTTCGATGAGAAATTAGAGTGGCGGGACTTCAAGTTCTGCTTCAAAGTGGGGACTAGCAAAGTGtCCGATATTCTGGACAAACTAATCGTTCATATAGAGTCCTTGCAAGACGTGGTGTTGCAAGTCTGCGAGTTGGTCCAAAGGGACGCGTTTACACAAACGCTGCAAGCGTTGGGTCTCCTGAGCGCGACCGCCTCCTTGTCGCACGCAAACGACGCCCCCAAGATGAAGAGGAGCCCCACGTATTCGGTGTCGACCCAGCACGGCTACAAGCTGAATCTGGTCGAATCTCTGTATGTGCCTCCGGAAGCGAGCAATAGCATACTATCACAGATGTGCCTGCAGCTGTTGAAGAGCGAGAAGAAAGCCGACATGGAATTTGAAATAGTTGGTACTAATTATAGTTTAGAGCAGAACGAGGAGGGTGCGACGCCCCCCGAAGAGAAGTGCATTATAAAATCACACAGGGTTATTGTGGCGGCTCGATGCGACTGGTTCAGGAGAGCCCTGCTGTCGGGGATGAGGGAGGCGATAGACAAGAGGATAGTCGTACACGACACTAGCCCCTTTCTATTCAGAACGTTGCTGGAGTATTTGTACGGTGGCAGGTTGAAACAGGAGTCCTTGTTGACTGAACAACTCGTAGAATTACTCTTGCTTAGCGATAGATATGAAATTGACTGTCTCAAACAGACCTGCGAGCAGGTGTTATTGAAAAGCGTGGACGTCGAATCCGCCTTGTATTTTTTAAGCGTGGCCGATCAATACAACGCAAGAACTTTGAGGAGCCGGTGCCTGAACTTCATCTCGTTACACCACGAAGTGACAGAGAACGACGAGTTCTTCGAGTTGCCCATATCGTTGCAAGCTGAAATATTCGATTGCGTCTGGACGCAGCCTGTAGCGAGGCAGGCGGAGGTTCTAGGTTATGGCTTGGAGCACTTGCGCGCCACATCATCGGGCAGCAGTAATTCCCTTCATTGCGCGAGCCCCGGCATGACGGACCTGAACAAGGCCGTCGAATCCATGTTGCTGACTCCCGAATTGGACCCCAACCATTCTAACGCCAGCTCCCTCGAGGATCTACGATTGGAACAGAATTCGAGTCGGATGGACGCCACCCTCGCTCAATTGCGCGACATTGTCGGCGACTCCTCGTCGAGGGAGACTCTGGTGCAGGTCATCCTGGCCGCAGATTTCGATTTGCGCCGGGCGGTGAACTACTATTACGCGAGGAGCACCGGGGACGAGTAG
- Protein Sequence
- MASRIAFTGTWEVIKCEYVKGTYIGNYDKYIKCLEGIKFRLDENGDVTWFIPEELKSVPLFSCETYEHYTHAGRQGVVLRFGAYAGHVFEFASDKILPESSVVLTCEGLCTLHCVRVNDDAPEDTHNIPFTLLPALEDGYFSDITITSSNNKQFKVHSTVLEGQGTDINWNSDPPPFSNISEDVLGTILHFMYSECLPENLMEETARQVITVASNYASLGRLVNICQLYLKNMALKQQIIGLVNDMHSYMNQIIDRFHPRANHVAENIVANPEKLCFVVKQSIRDAAVASAKLLLLCDLFTKRKNELSRNERHEIIRYAKSRLPIFLTQLTRFLQALKNTFSSMSPVQRMEIATFLVPEIEVILDTISMLIVHVEKALQQIIQGLFTPDVTKCKSNVGDMLSKTLRNLLHIRELTKLNTFHEHVTCSLGLLVHKKENFNQMSSSQKVRSIARNLEQLIDELPIFLIRLEETTAAFDEKLEWRDFKFCFKVGTSKVSDILDKLIVHIESLQDVVLQVCELVQRDAFTQTLQALGLLSATASLSHANDAPKMKRSPTYSVSTQHGYKLNLVESLYVPPEASNSILSQMCLQLLKSEKKADMEFEIVGTNYSLEQNEEGATPPEEKCIIKSHRVIVAARCDWFRRALLSGMREAIDKRIVVHDTSPFLFRTLLEYLYGGRLKQESLLTEQLVELLLLSDRYEIDCLKQTCEQVLLKSVDVESALYFLSVADQYNARTLRSRCLNFISLHHEVTENDEFFELPISLQAEIFDCVWTQPVARQAEVLGYGLEHLRATSSGSSNSLHCASPGMTDLNKAVESMLLTPELDPNHSNASSLEDLRLEQNSSRMDATLAQLRDIVGDSSSRETLVQVILAADFDLRRAVNYYYARSTGDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00166217; iTF_01290542; iTF_01369937; iTF_00110716; iTF_01227464; iTF_01014781;
- 90% Identity
- -
- 80% Identity
- -