Scau003324.2
Basic Information
- Insect
- Stenodera caucasica
- Gene Symbol
- Mblk-1
- Assembly
- GCA_037414795.1
- Location
- JAZBGZ010000262.1:6413-13669[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-18 1e-14 53.7 0.0 1 44 336 380 336 381 0.94 2 2 1.1e-18 1.5e-15 56.3 0.0 1 43 705 748 705 750 0.95
Sequence Information
- Coding Sequence
- ATGTCGAGAAGTTATTTGCAACCattaaacaacaacatcaaaacaacaacaacaaattatcacAACAAGGATCAATCTGTAGTAACAGAAACGACGACGCCggaccaacaacaacaacaacaacacgagGAATATCCGCGAAAGCCTCAAGAAGTACAACTAGAAAAAGACAAATTGGCTACCacattatcgataaaaaacgAAGACGGAAGCGAAATAGAACAgaaagaaaacgaaaaatttctattacaacaacaacaacaacaacaaagaataGTGGACGAAAGACTCAAAGACTGGACGCCGGAGACAAAGTGTTATTTTTGTGTCGACGGCAAACTGGATAGTGAAAATACAGCACACGGGGTTCTGagTCCCCGCCAGTCGGACTCTGATTCGTCAGATAGCCATAGCGACAACGACATTCCGCCATCGTTGACGCCATCCGCACCAAGTTtgctcaacaacaacaacaacaacaaccatcaCCATCGATCCCATCACTACCACcacaacaaccaccaccaccatcatcatcatcatccacATAATTTACAATCGCCCAATATCCATCCGGCTGTAGCGCCCATCAATATGACAACGATGGAAAGCGTTACATCTATGGCATTAGCTGCAGCTTTTGCTGGTGGCGGTAACTCACCTGGAACGGCACCAGCAACAGCCACCCCTTTATCATTCTACACCCCAAGTTTATTAACCCATAATTGGTATCACCTGGCCAATGTAGCTAGAACATTTCAAACCGACCGATTAACACCGGCTGGTGATAACGATAAGAACAATACAGCAGGAGTTGGTGGTGAACAACCACTCGACTTAAGTAAAggatcaaacaacaacaacaataacaataataacagtaataataataataataatgctaataaTAATGTACGACTGTCCACTTTGGATACTAAACAGATATTCAATTCTGATTTTAGAGCGAAGCCTAGAATGTCGGCTGTGGCCAGTCGACGTACCTATACTGAAGATGAACTACAAGCAGCCCTAAGGGACATTCAATCGGGTAAATTGGGTACGAGAAGGGCGGCCGTTATTTACGGCATACCACGATCGACATTACGCAATAAAGTTTATAAGTTGGCATTGGAAAGGGAGCGTGAATCGCACTTGAACAGCTCAACAACACAATTGAAACTCGACGAAGAAGAAGTAATGGACGAGGATAAGGAATTATCGGGGGCTGAAGAAGAGAAAGAAGTTGAAAAAGCATTACAAGCACCGTTATGTGATATTTTACGTTTATCGAATATGGAAATACCGGTGGATGTATTGAAGAATATCATGCAAAAAAGCAAAGATGGCCAAGAGAATTGGGGTATTGAGCATAGCGAATTGGGACCttatatacaaaatttattgttggcGTCGCATAATTTTATGgcgaatcaaaaaaatttggatGGTATGCCGGAATTCTTGAAACGTATACCTGATGAACAATCGACgactaaacaacaacaaaataatggcgaaaatgagaaattgatGCGACCAAGTCCATCGAATTCGGTGGCTAGTAATAAACCGGATCGTGTACGTTCCGAATCCGACATGGAAACAGATGAATCACCATCGAATGTGATATTAAAAATTCCGTCCTTCAAGCCGACATCAAGCAAAAATGGATGTGatttattcaatagaaatcAAATGGAAACAAACAATATCGTATCACCGCCGATTATAACGAACGAATCGAATTCACCGCCAATTCTATCAGCCAAAATGACGATAAAAGACGTTAAAGACGTTATAGCTCAAAGTATTAGCCAGAAATTCCAGCAGAATTTGGAGCCGGCTCGAAGGCCACCGCCGCAAGCCCCATCCCAATCATCATCTTTGATGGAAATGGACTATAAACGGACTGCTTATACGCCGCCATTAACTACCGGTATTTCGGTTATTAAAACACAAGATTTGACACAACAACGACCAtcttatcaacaacaatcacaacaacaacaacaaatgaaatcgCAACCGAATACGTCGAATAGCGGCAATAATGCTGCTAATCAAGCGGGCGGTAAAGGGACACGTCCGAAACGCGGTAAATATCGTAATTACGATAGAGATAGTTTAGTTGAAGCTGTTAGGGCTGTTCAACGTGGCGAAATGTCTGTACATAGGGCCGGTAGCTATTACGGTGTGCCCCATTCAACATTAGAATATAAAGTGAAAGAACGTCATTTGATGAGACCGAGAAAACGTGATCCAAAACCGAATCCtgttgatgagaaaattgCTAGTTTAAAACAAAACGATATACGTAATACACaagataaattaatgaaaccatcaacaattaataataataacaataataataataataatggtagtaATGGTGGTAATGGACCAATGAAACCGCCACAGAAATTCCCACCGACATCGCCGAATGGTATGAAATTGCCGATATTCGGTGAACCGGGTATGGCACCTTTAGCCGGCTATAATCCAGCACCATTTCCATTTTGGCCACATCCAGGCTATCACATTCCTATTGATTTTGCTAGGAATCCAACAACGCCACCATTCCCGCCGAATCCTGAATTTTTTGCATCGCAAATGATGCAAAAATTGCAAGAAGACACCTCGAGAACACCACCAATAACGACAACCAGtacaacagcagcaacaacaacaacaactataaccaatcaaaatattgttacaacaacaacaacaacagcagcaacaacgGTACCACAATTGAATACATCGCCGGCATTAGCGAAAAGTGCCCGGCAAATTGCCGAATCCCTACTCGACGGTACCGGTTCCAATGGGTCATTTCTGGATGGTATAATCCGATCGAGTCTGGAACAAGGTGTACCAACATTGGAGGAGAAATCACCAAAAGAAGATAAGAATGTTGCACCTGAAAATATGTCGAATAAAGCTCTATTAGAACAATTGTGTCGGAATAGTCGATTGACGCCATtaacaaaaccaacaacatTGAACGAACCGAACAGTTCCGGCGATGAGTCCTACAGGAAAGGTAGTAGTCCTTTAAATTTCTCCGGAGcaTCACGAGAACCGGACAGTTCGCCAACTTTATTGCATTATGACCGGTTGGATCCGATGGCTTCTTCAGCTGATTTACCGACAATTGAATTGTCGAACGATTCCAATGATGACGATTCATCTGATAAGCGATCATTGAAGGATGATGACAGATTGATGATGATTAGtccaccacaacaacaacaacaacaacaaccgcgTATTTATCTGAAGAAAGATCTGGCCAATCCGGATAATCTACAACCGGAAATGCTGATGCGTTTCCGGGAATTATTGCCGGATACGGAACGGAACGGCATCAGCGATGGCGGTATAACTGGAAGTGCCTCGGATAACGATGCGCCTCAAGACTGA
- Protein Sequence
- MSRSYLQPLNNNIKTTTTNYHNKDQSVVTETTTPDQQQQQQHEEYPRKPQEVQLEKDKLATTLSIKNEDGSEIEQKENEKFLLQQQQQQQRIVDERLKDWTPETKCYFCVDGKLDSENTAHGVLSPRQSDSDSSDSHSDNDIPPSLTPSAPSLLNNNNNNNHHHRSHHYHHNNHHHHHHHHPHNLQSPNIHPAVAPINMTTMESVTSMALAAAFAGGGNSPGTAPATATPLSFYTPSLLTHNWYHLANVARTFQTDRLTPAGDNDKNNTAGVGGEQPLDLSKGSNNNNNNNNNSNNNNNNANNNVRLSTLDTKQIFNSDFRAKPRMSAVASRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLNSSTTQLKLDEEEVMDEDKELSGAEEEKEVEKALQAPLCDILRLSNMEIPVDVLKNIMQKSKDGQENWGIEHSELGPYIQNLLLASHNFMANQKNLDGMPEFLKRIPDEQSTTKQQQNNGENEKLMRPSPSNSVASNKPDRVRSESDMETDESPSNVILKIPSFKPTSSKNGCDLFNRNQMETNNIVSPPIITNESNSPPILSAKMTIKDVKDVIAQSISQKFQQNLEPARRPPPQAPSQSSSLMEMDYKRTAYTPPLTTGISVIKTQDLTQQRPSYQQQSQQQQQMKSQPNTSNSGNNAANQAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDIRNTQDKLMKPSTINNNNNNNNNNGSNGGNGPMKPPQKFPPTSPNGMKLPIFGEPGMAPLAGYNPAPFPFWPHPGYHIPIDFARNPTTPPFPPNPEFFASQMMQKLQEDTSRTPPITTTSTTAATTTTTITNQNIVTTTTTTAATTVPQLNTSPALAKSARQIAESLLDGTGSNGSFLDGIIRSSLEQGVPTLEEKSPKEDKNVAPENMSNKALLEQLCRNSRLTPLTKPTTLNEPNSSGDESYRKGSSPLNFSGASREPDSSPTLLHYDRLDPMASSADLPTIELSNDSNDDDSSDKRSLKDDDRLMMISPPQQQQQQQPRIYLKKDLANPDNLQPEMLMRFRELLPDTERNGISDGGITGSASDNDAPQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00813633; iTF_00814318; iTF_00841761; iTF_01566161;
- 90% Identity
- -
- 80% Identity
- -