Ipal006651.1
Basic Information
- Insect
- Iselma pallidipennis
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_037464855.1
- Location
- JAZBHA010000615.1:3931-10144[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-18 7.9e-15 54.0 0.0 1 44 139 183 139 184 0.94 2 2 9.3e-19 1.2e-15 56.6 0.0 1 43 520 563 520 565 0.95
Sequence Information
- Coding Sequence
- ATGACGACAATGGAAAGTGTCACATCTATGGCATTAGCGGCTGCTTTtgctggtggtggtaattCACCTGGAACAGCACCAGCAACAGCTACCCCTTTATCTTTCTATACGCCTAGTTTATTAACACATAATTGGTATCATCTGGCCAATGTGGCAAGAACATTTCAAGCGGATCGCTTAACACCGGctggtgataatgataagaataatacAGTAGGTGGTGAACAACCACTAGATTTAAGTAAAggatcaaataataataatagcaacatcaacaataacaacaacaacaataataataacaataatgccAATAATAATGTACGACTGCCTACACTGGATACTAAACAGATATTTAATTCTGATTTTAGAGCGAAGCCTAGAATGTCAGCAGTGGCCAGTCGACGTACATATACTGAAGATGAATTACAAGCAGCATTAAGGGATATTCAATCCGGTAAATTAGGTACTAGAAGGGCAGCTGTTATTTATGGTATACCTAGATCAACACTAAGAAATAAAGTTTATAAACTTGCCTTGGAAAGGGAACGTGAATCGCATTTAAATAGTTCAACAACACCATTAAAACTTGACGAGGAAGAGGCAATGGATGATGATAAAGAGTTATCAGGTGCtgaagaagagaaagaagTTGAGAAAGCATTACAAGCACCACTATGTGATATATTACGTTTATCAAATATGGAAATACCGGTAGATGTTTTGAAGAACATCATGCAAAAAAGTAAAGATGGTAGTCAAGAGAATTGGGGTGTTGAACATAGTGAATTAGGACcttatatacaaaatttattattggcTTCACATAATTTGTTAGCAAATCAGAAAAATTTGGACAATACTATTGTAAGTAGTGTTATGCCGGACTTTTTGAAACGAATTATATCAGAGGATCAATTAAAACTTCACCAacatcaacaccaacaacaacagcagaaTAATGGTGAAAATGAGAAATTGATGAGACCAAGTCCATCAAATTCTGTAACAAGTAATAAACCAGATCGTGTACGATCCGAATCTGATATGGAGACAGATGAATCACCATCAAATGTGATATTGAAAATTCCGTCCTTCAAGCCGACAACAAGCAAGAATGGatgtgatttatttaatagaaatccAATGGAAATAAATAGTATTGTATCACCACCggttattaaaaatgaatcaaattcACCACCAATACTATCGGCAAAAATGACGATAAAAGATGTTAAAGATGTTATAGCTCAAAGTATTAGTCagaaatttcaacagaacTTGGAGCCGGCTCGAaggccaccaccaccaccgccaccaccatcaatcATGGAAATGGATTATAAAAGGGGTGCATATACACCACCGTTAACTGGTGGGATTTCTGTTATAAAAACTCAAGACCTAACACGTCCATCatatcagcaacaacaacatattaaATCTCAACTAAATACGtctagtagtagtggtggtggtggtagtagtagtagtaataataatgcagCAGGTGGTAAAGGGACACGTCCGAAACGTGGTAAATATCGTAATTATGATAGAGACAGTCTTGTTGAAGCTGTTCGGGCTGTGCAACGCGGTGAAATGTCTGTACATCGGGCGGGTAGTTATTACGGTGTACCCCATTCAACATTAGAATATAAAGTGAAAGAACGACATTTAATGAGACCGAGAAAACGTGATCCAAAACCAAATCCTGTTGATGAAAAAATTGCCAGTTTAAAACAGAACGATATACGTAATACACAAGATAAAATGAAACCAACAAATaatagtggtagtagtagtggtggtggtggtagtggtagtggtggtccAATGAAACCACCACAAAAATTCCCACCAACCTCACCAAATGGTATGAAATTACCAATATTTGGTGAACCAGGCATGACACCATTGCCTGGTTACAATCCTGCACCATTTCCATTTTGGCCGCATCCAGGTTATCACATTCCTATTGATTTTGCTAGGAatccaacaacaccaccattcCCACCAAATCCTGAATTTTTCGCATCACAAATGATGCAAAAATTACAAGAGGATTCATCAAGAACACCACCATCTACTAgtacgacgacaacaacaataacaacaacaaatcagaATACAACCGCGACACAAATTAATCCAATAGCAGCACCAGCATTAGCAAAAAGTGCCCGACAAATAGCTGAATCTTTACTAGATGGTACAGGATCGAATGGTTCCTTTTTAGATGGAATTATTCGATCAAGTTTAGAACAAGGTGTACCACCAACACCTGAAGAAATATCACCAAAAGAAGACAGAAATATTGCACCTGAGAATATGTCAAATAAAGCTTTACTGGATCAGTTATGTCGAAATAGTCGATTGACACCATTAACAAAACCAGCATTAACAGAACCGAATAGTTCCGGGGATGAATCTTACAGGAAAGGTAGTAGTCCCCTAAATTTCTCAGGAGCACCAAAAGAATTTGACGATTGTTCTCCACCATTACTACATTATGATCGTTCTGATTTATCGACACATCCTCCAATTGGTGCTTGTTCAACCGAACTACCGACAATTGAATTATCGAACGATTCGAATGAAGAAGATTCGTCTGATaagaaatcattaaaagaTGATGACAGATTAAAGGCAAGTCCTccgtcaccaccaccaccaccaccaccacctgcACGTATCTATTTGAAGAAAGATCTGGCTAATCCGGATAATCTTCAACCTGAAATGCTGATGCGTTTCCGTGACTTATTACCAGATACAGACCGGAATGGCGTCAGCGATGGTATAATTGGAAGTGCCTCGGATAACGATGCGCCTCAAGACTGA
- Protein Sequence
- MTTMESVTSMALAAAFAGGGNSPGTAPATATPLSFYTPSLLTHNWYHLANVARTFQADRLTPAGDNDKNNTVGGEQPLDLSKGSNNNNSNINNNNNNNNNNNNANNNVRLPTLDTKQIFNSDFRAKPRMSAVASRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLNSSTTPLKLDEEEAMDDDKELSGAEEEKEVEKALQAPLCDILRLSNMEIPVDVLKNIMQKSKDGSQENWGVEHSELGPYIQNLLLASHNLLANQKNLDNTIVSSVMPDFLKRIISEDQLKLHQHQHQQQQQNNGENEKLMRPSPSNSVTSNKPDRVRSESDMETDESPSNVILKIPSFKPTTSKNGCDLFNRNPMEINSIVSPPVIKNESNSPPILSAKMTIKDVKDVIAQSISQKFQQNLEPARRPPPPPPPPSIMEMDYKRGAYTPPLTGGISVIKTQDLTRPSYQQQQHIKSQLNTSSSSGGGGSSSSNNNAAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDIRNTQDKMKPTNNSGSSSGGGGSGSGGPMKPPQKFPPTSPNGMKLPIFGEPGMTPLPGYNPAPFPFWPHPGYHIPIDFARNPTTPPFPPNPEFFASQMMQKLQEDSSRTPPSTSTTTTTITTTNQNTTATQINPIAAPALAKSARQIAESLLDGTGSNGSFLDGIIRSSLEQGVPPTPEEISPKEDRNIAPENMSNKALLDQLCRNSRLTPLTKPALTEPNSSGDESYRKGSSPLNFSGAPKEFDDCSPPLLHYDRSDLSTHPPIGACSTELPTIELSNDSNEEDSSDKKSLKDDDRLKASPPSPPPPPPPPARIYLKKDLANPDNLQPEMLMRFRDLLPDTDRNGVSDGIIGSASDNDAPQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01366249;
- 90% Identity
- -
- 80% Identity
- -