Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_013841185.1
Location
JACDRP010000177.1:63135-87658[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.2e-18 9.5e-15 53.5 0.0 1 44 419 463 419 464 0.94
2 2 1.4e-18 1.4e-15 56.2 0.0 1 43 798 841 798 843 0.95

Sequence Information

Coding Sequence
ATGGCGGAGTGCTCCTATGCGCGATGCGTTCAACAGAGAAGAAATATTAGACGAGAATTACAAAGATGGACCAGAAACATGGTGCATATAGTCGGGTTGGAACGAATCGCTGAAGAATTAATGGGTCGTAGGAAATGGAAACTATATCAAGAATCCATGTCGAGAAGTTATTTGCAACCATTGAACAACAATATAAAGACAGCAACAACAACAATAACAACACCAACAACAAATCAAGAGAATTATTACAACAACAACAACAACAAAGACCAATTCGGTTTAATATCAATTACAGAACAACAACAACAGAACGAAGAATATACGAAAAAGAACCAAGAATTAATAGAACAACACGAAAAAGACAGATTTGTCCCATTAACGATAAAACGCGAAGACGAAAAGAACGATACAGAAATAGAACAGAAAGAAAACGAAAAAATTCTGTGCCAACAACAACAACAACAAAGGCTAATAGTGGAGGAAAGACTCAAAGACTGGACGCCGGAGACGAAGTGTTATTTTTGTGTCGACGGCAAACTGGATAGTGAAAATAATACGACGACCGGGGTTCTGAGCCCCCGCCAAACGGACTCTGATTCATCAGATAGCCATAGCGACAACGACATTCCGCCATCGTTGACGCCATCCACAACAAGTTTGCTCAACAACAACAACAACAACAACAATAGTAGTAGTAGTAACCACAATTACCATCGATCCCACCACCATTACCACCACAACAACAACAACAATCACCACCATCCCCATCATCATCATCCACACAATTTACAATCACCAAACATCCATCCGGCTGTGGCGCCTATCAATATGACGACGATGGAAAGTGTCACATCAATGGCATTAGCGGCCGCTTTTGCTGGTGGTGGTAATTCACCTGGAACAGCCCCAACAACTGCCACCCCTTTATCATTCTACACGCCTAGTTTATTAACACACAATTGGTATCACCTGGCCAATGTTGCTAGAACATTTCAAACAACGGATCGTTTAACGCCGGCTGGTGATAATGATAAGAATATTACAGTAGGTGGTGGTGGTGGTAGTAGTGGCGAACAACCACTAGATTTAAGCAAAGGATCCAACAATACGATCAACAATAATAACAATAATAATAATAGTAATAATAATAATAGTCATCATAATGCAAATAATGTACGACTGCCCACTCTGGATACTAAACACATATTTAAAGCGAAGCCTAGAATGTCAGCAGTGGCCAGTCGACGTACTTATACAGAAGATGAACTGCAAGCAGCCTTAAGGGATATTCAATCTGGTAAATTGGGTACAAGAAGGGCGGCTGTTATCTACGGTATACCTAGATCGACATTGCGCAATAAAGTTTATAAATTAGCGTTGGAAAGGGAACGTGAATCGCATCTAAACAGTTCAACGACACCATTGAAATTGGACGAAGAAGAACCGATGGATGATGATAAAGAATTATCCGGTGCTGAAGAAGAGAAAGAAGTTGAGAAAGCTTTACAAGCACCATTATGTGATATATTACGTTTATCGAATATGGAAATACCGGTCGATGTTTTAAAGAATATTGTACAGAAAGGTAAAGACGGACAAGAGAATTGGGGTATTGAACATAGTGAAATAGGACCTTATATACAAAATTTATTATTAGCATCGCAGAATTTATTAACGAACCAGAAAGCATTAGATAGTACGATTTTAAGTAATGTTATGCCGGAATTTCTAAAGCGTATTATAGCTGAGGAACAATCAAAAATATCATCATCACAATTATTACAACAAACACAACAAAATAATGGCGAAAATGAGAAATTAATGCGACCGAGCCCATCAAATTCGGTAACGAGTAATAAACAAGATCGTCTTCGTTCTGAATCTGATATGGAAACAGATGAATCACCATCGAATGTGATATTAAAAATTCCGTCCTTCAAGCCGACATCAAGCAAGAATGGATGTGATTTATTCAATAGAAACCAAATGGAAACGAATAGTATCGTATCACCACCGATTATAACAAACGAATCAAATTCACCACCGATATTGTCAACGAAAATGACGATAAAAGATGTTAAAGATGTTATAGCCCAAAGTATTAGTCAGAAATTCCAACAGAACTTGGAGCCGGCTCGAAGGCCACCGCCACCGCCGCCACCACCGCCTCCGACATTAATGGAAATGGATTATAAAAGAGGAACGTACACGCCGCCGTTAAGTAGTGGAATTTCCGTTATAAAAACACAAGATTTAACACGATCGCCGTATCAACAACAGCAGCAAATGAAACCTCAACCGAATACATCGTCGAGTAGTAGTGGTGGTAATAATTCATCGCAAGCAGGTGGTAAAGGGACACGTCCGAAACGTGGCAAATATCGTAATTATGATAGAGACAGTCTTGTTGAAGCTGTTCGGGCTGTGCAACGCGGTGAAATGTCCGTACATCGTGCCGGTAGTTATTACGGTGTGCCCCATTCAACATTAGAATATAAAGTGAAAGAGCGACATTTAATGCGGCCGAGAAAACGTGATCCAAAACCGAATCCTGTTGATGAGAAAATTGCCAGTTTAAAACAGAATGATATACGTAATACACAAGATAAATTAAAATCAACAAATAATAGTAATAATACTAATAATAATGGTAATAGTGGTAGTAATAGTGGTCCAATGAAACCACCGCAAAAATTCCCACCAACATCACCGAATGGTATGAAATTACCAATATTTGGTGAACCAGGAATGACACCATTAGCTGGTTATAATCCTGCACCATTTCCATTTTGGCCACATCCGGGTTATCATATTCCTATTGATTTTGCTAGGAATCCAACAACACCCCCATTCCCACCGAATCCGGAATTTTTCGCATCGCAAATGATGCAAAAATTACAAGAGGATTCATCTAGAACACCACCGGCAACAACAACAACAGCACCAACAACAATTATAACAACAATAACAACAACAACAACCACCTCATCGACTAATAATTCAAACACAATAACAACACCAGCATTGGCGAAAAGTGCCCGACAAATCGCCGAATCCTTATTGGACGGTACCGGGTCGAATGGTTCATTTTTGGACGGTATAATTCGATCGAGCTTAGAACAAGGTGTACCGACACCGGAGGAGAAATCGCCGAAAGAAGACAAGAACGTCGCACCTGAGAATATGTCGAATAAAGCCCTATTGGATCAATTATGTCGAAATAGTCGATTAACACCGTTAACAAAACCAACTTTAATTGAACCGAATAGTTCTGGTGATGAATCGTATAGGAAAGGTAGTAGTCCTCTAAATTTCTCAGGAGCATCAAGAGAACACGATAGTTCTCCACCTTTACAATACGATCGTTCCGATTCATCGATGAATCTGATGGTTTCTTCAGATTTGCCGACGATTGAATTATCGAACGATTCGAATGAAGACGATTCGTCCGATAAGCGATCATTGAGAGATAACGATGAACGATTACAGACGACAAGTCCACAACAACAACAACAACCGCCTCGTATCTACTTGAAGAAAGATCTAACCAATCCTGATAATCTACAACCGGAAATGTTGATGCGTTTCCGGGATTTATTGCCGGATACTGAACGGAATGGCGTTGTCAGTGACGGTGGTGGCGGCGGTGGTGGTGGTGGTGGCGGTGGTGGGCGTAGTATATTAACAACAGGAAGTGCCTCGGATAACGATGCGCCTCAAGACTGA
Protein Sequence
MAECSYARCVQQRRNIRRELQRWTRNMVHIVGLERIAEELMGRRKWKLYQESMSRSYLQPLNNNIKTATTTITTPTTNQENYYNNNNNKDQFGLISITEQQQQNEEYTKKNQELIEQHEKDRFVPLTIKREDEKNDTEIEQKENEKILCQQQQQQRLIVEERLKDWTPETKCYFCVDGKLDSENNTTTGVLSPRQTDSDSSDSHSDNDIPPSLTPSTTSLLNNNNNNNNSSSSNHNYHRSHHHYHHNNNNNHHHPHHHHPHNLQSPNIHPAVAPINMTTMESVTSMALAAAFAGGGNSPGTAPTTATPLSFYTPSLLTHNWYHLANVARTFQTTDRLTPAGDNDKNITVGGGGGSSGEQPLDLSKGSNNTINNNNNNNNSNNNNSHHNANNVRLPTLDTKHIFKAKPRMSAVASRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLNSSTTPLKLDEEEPMDDDKELSGAEEEKEVEKALQAPLCDILRLSNMEIPVDVLKNIVQKGKDGQENWGIEHSEIGPYIQNLLLASQNLLTNQKALDSTILSNVMPEFLKRIIAEEQSKISSSQLLQQTQQNNGENEKLMRPSPSNSVTSNKQDRLRSESDMETDESPSNVILKIPSFKPTSSKNGCDLFNRNQMETNSIVSPPIITNESNSPPILSTKMTIKDVKDVIAQSISQKFQQNLEPARRPPPPPPPPPPTLMEMDYKRGTYTPPLSSGISVIKTQDLTRSPYQQQQQMKPQPNTSSSSSGGNNSSQAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDIRNTQDKLKSTNNSNNTNNNGNSGSNSGPMKPPQKFPPTSPNGMKLPIFGEPGMTPLAGYNPAPFPFWPHPGYHIPIDFARNPTTPPFPPNPEFFASQMMQKLQEDSSRTPPATTTTAPTTIITTITTTTTTSSTNNSNTITTPALAKSARQIAESLLDGTGSNGSFLDGIIRSSLEQGVPTPEEKSPKEDKNVAPENMSNKALLDQLCRNSRLTPLTKPTLIEPNSSGDESYRKGSSPLNFSGASREHDSSPPLQYDRSDSSMNLMVSSDLPTIELSNDSNEDDSSDKRSLRDNDERLQTTSPQQQQQPPRIYLKKDLTNPDNLQPEMLMRFRDLLPDTERNGVVSDGGGGGGGGGGGGGRSILTTGSASDNDAPQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01366249;
90% Identity
iTF_00813633;
80% Identity
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