Scal013807.1
Basic Information
- Insect
- Stenodema calcarata
- Gene Symbol
- CDC5L
- Assembly
- GCA_963920205.1
- Location
- OY986051.1:29346693-29354705[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-16 2.9e-13 51.0 1.5 2 46 9 54 8 54 0.97 2 2 5e-12 1e-08 36.4 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- ATGCCTCGTATTATGATAAAGGGTGGTGTGTGGAGGAACACAGAGgatgaaattttgaaagcgGCTGTGATGAAATATGGCAAAAACCAGTGGTCCCGTATTGCATCTTTGCTTCACCGTAAGTCGGCCAAGCAGTGTAAAGCCCGTTGGTTTGAGTGGCTTGATCCAAGTATCAAGAAGACCGAATGGAGCCGCGAAGAAGACGAGAAACTCTTGCATTTGGCCAAACTCATGCCGACCCAATGGAGGACCATTGCTCCTATCATTGGCAGAACCGCTGCACAGTGTCTGGAACGTTATGAGTACTTACTGGATCAAGCTCAAAAGAAAGAAGACGGAGAAGATGGAGCTGATGATCCAAGAAAGCTCAAGCCGGGGGAGATTGATCCCAATCCAGAAACCAAACCTGCTCGTCCTGACCCAAAGGACATGGATGAAGATGAGCTGGAGATGCTTTCGGAAGCAAGAGCTAGGCTTGCCAACACTCAGGGCAAAAAGGCCAAAAGAAAGGCCCGCGAGAAGCAGTTGGAAGAGGCCAGGAGATTAGCTGCCTTACAGAAACGGCGCGAGTTACGAGCTGCTGGAATTGAATTGGCTGCCAGGTCGAAACGCAAGGGGATCGACTACAATATGGAGATACCTTTTGAGAAGAAGCCTGCCGCCGGTTTCTATGATACGAGCAATGAAGCCATTGATCCTCACCAACCCAACTTCAACAGGCTGCGCCAACAGACGCTTGATGGGGAATTGAGAAGTGAAAAGGAAGAGAAAGAACGACGTAAGGACAAGAATAAAATCAAACAGAGAAAGGAAAATGACATGCCTTTGGCAATGCTTCAAAATCAGGAGCCAGCGAAGAAGAGGAGCAAACTTGTTCTACCGTCACCTCAAATATCCGATCAAGAACTTCAACAAGTCGTGAAACTTGGGAGAGCGAGTTACGCTGCGAGGGAAGCAGTAAGTGAAGGAGCTGACAGTGCTGCTGACACTTTACTAAACGATTATGCTCTAGCTACACCCAATGCTGCCAACGTGGCCCGTACTCCTGCACCGACTACTGATCGTATCCTCCAAGAAGCTCAAAATATGATGGCACTGAGCCACGTAGATACGCCTCTCAAAGGTGGTTTGAACACTCCCCTTTACAATCCAGACTTCAattttcatcctcaaagtgACCAAATCACCACTCCAAATACTGTTCTGACTACTCCATTTTCCACCAGAGGGCCCGACGGCTCTGGTCGCACTCCAGGGTTCCTCACGCCTAAAGATGCGCGCACAGGAGGTGCCACCCCCACTCCTATTCGTGATAAATTGAACATCAACCCTGAAGACATCATGGGCGGAGATACGCCAATTGCTACATATCAATCTCAGGTGAAAGAGCAGTTGCGTTCTGGGCTCAGGGGGTTGCCCATGCCGAAGAACGACTATGAAATCGTGGTGCCGGAAGATGAGATGGTCGTACAAGAGGGTGATCAAATCACCTCAAACCAATCTGTCGAGGATCAATCTGATATCGACGCCAGACATTTAGCCGAGTTGGCTGTACAACGCGAAAAAGAGTTGAGAAGCCGATCTCAGGTCATACAGAGAGGATTTCCCCGGCCAGCGGATGTTAACATTGTGCTTCGACCACTAAACTCCGATCCACCCCTCACTGACTTACAAAAGGCGGAGGAACTGATAAAGCAGGAGATGATCACTATGCTGCACTATGATGCTATTCAAAATGGTGATCCTCCCATGCCAACTAGAAAGTCCGGTATTAACCTTCACGCCCAGCATTTAGCTCATTTGGAAGAACGTCCTTACGAAAACCCGAGTGAGGAAGAATTGGAGAAGGcgaaacaaatgttgaaatccGAGATGGAAGTAGTGAAACAAGGGATGAATCACGGTGATCTATCATTAGATACTTTCACCCAAGTCTGGGAAGAGTGCCTTGCTCAGGTGCTGTATTTACCGAATCAAAATCGTTACACCAGAGCCAGTTTAGCGAGTAAAAAAGACCGGCTGGAGTCAGTGGAGAAGAGACTGGAGCAGAATAGGAATCACATGACGAGAGAGGCCAAACGAGCCGCAAAGATGGAGAGAAAAATTCGCATCATCACAGGCGGCTACCAGTCGAGGGCCACTGCTTTGATAAAACAACTTCAAGACGTCTACGACCAAATAGACCAGGCTCACATGGAGAAATCTACTTTCCAACTTTTGCAGCAATTGGAGGAAAGCGCCATTCCGAGGAGGATAGAGGCCATTTCTGAGGAAGTGAGTCGACAGCTGGACCGTGAGAAATCCCTACAGAAGCGGTTCAACGATCTCCAATTGGTCACTCACACCTGA
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEDGEDGADDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIELAARSKRKGIDYNMEIPFEKKPAAGFYDTSNEAIDPHQPNFNRLRQQTLDGELRSEKEEKERRKDKNKIKQRKENDMPLAMLQNQEPAKKRSKLVLPSPQISDQELQQVVKLGRASYAAREAVSEGADSAADTLLNDYALATPNAANVARTPAPTTDRILQEAQNMMALSHVDTPLKGGLNTPLYNPDFNFHPQSDQITTPNTVLTTPFSTRGPDGSGRTPGFLTPKDARTGGATPTPIRDKLNINPEDIMGGDTPIATYQSQVKEQLRSGLRGLPMPKNDYEIVVPEDEMVVQEGDQITSNQSVEDQSDIDARHLAELAVQREKELRSRSQVIQRGFPRPADVNIVLRPLNSDPPLTDLQKAEELIKQEMITMLHYDAIQNGDPPMPTRKSGINLHAQHLAHLEERPYENPSEEELEKAKQMLKSEMEVVKQGMNHGDLSLDTFTQVWEECLAQVLYLPNQNRYTRASLASKKDRLESVEKRLEQNRNHMTREAKRAAKMERKIRIITGGYQSRATALIKQLQDVYDQIDQAHMEKSTFQLLQQLEESAIPRRIEAISEEVSRQLDREKSLQKRFNDLQLVTHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00883974; iTF_00145512; iTF_01500285; iTF_00930270; iTF_00386272; iTF_00339817; iTF_01479366; iTF_00165186; iTF_01309352; iTF_01478763; iTF_00372849; iTF_00757267; iTF_00763795; iTF_01108345; iTF_00715066; iTF_01298303; iTF_01301567; iTF_00154445;
- 90% Identity
- iTF_00883974;
- 80% Identity
- -