Basic Information

Gene Symbol
CDC5L
Assembly
GCA_000648675.3
Location
NW:662070-667352[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.9e-17 7.6e-14 50.9 1.5 2 46 9 54 8 54 0.97
2 3 3.6e-12 2.7e-09 36.4 0.1 1 45 60 103 60 104 0.93
3 3 3.2 2.4e+03 -1.9 0.2 3 14 608 619 607 622 0.78

Sequence Information

Coding Sequence
ATGCCGCGGATAATGATTAAAGGAGGAGTGTGGAGGAACACCGAGGATGAAATCCTCAAGGCCGCCGTCATGAAGTACGGCAAGAACCAGTGGTCGAGGATAGCGTCCTTGCTCCACAGGAAGTCGGCGAAGCAGTGTAAAGCACGTTGGTTCGAATGGCTCGATCCAAGTATTAAAAAGACGGAGTGGAGCAGAGAAGAGGATGAAAAACTTCTCCACCTGGCCAAATTGATGCCGACGCAGTGGCGTACGATTGCTCCGATAATCGGAAGGACAGCTGCCCAGTGCCTTGAGCGATACGAGTACTTGCTTGATCAAGCGCAGAAAAAGGAAGAGGGTGAAGATGGCGCCGATGATCCTAGAAAGCTTAAACCTGGAGAGATTGATCCCAATCCAGAAACAAAGCCCGCTCGACCCGATCCCAAAGATATGGACGAAGATGaaCTGGAAATGCTTTCTGAAGCCAGAGCTCGTTTAGCCAACACTCAGggcaaaaaggcaaaaagaaagGCCAGGGAGAAACAGTTGGAAGAGGCTAGGAGGCTTGCTGCTTtacagaaaaggAGAGAATTGAGAGCAGCTGGTATTGAATTTGCGTCaagacaaaaaaggaaaagagggaTAAACTACAATGCTGAAATTCCTTTTGAAAAGAAACCCGTACCTGGATTTTTTGATACGAGCAATGAAATTATCGATCCACATTTGCCGAATTTCCATAGGCTTCGACAGCAAAATTTGGATGGGGAATTAAGAAGTGAAAAAGAAGAGAAAGAACGTCGCAaggataaacaaaaagtaaagcaaagaaaagaaaatgacatGCCATTGACAATGCTTCAAAATCAGGAGCCAGCAAAGAAACGTAGCAAACTAGTTTTACCCGCACCTCAGATATCAGATCAAgaatTGCAACAAGTAGTGAAACTTGGTAGGGCAAGTTATGCAGCTAGGGAGGCAGTGAGCGAAGGGAATGAAAGCGCTGCTGACACACTTCTGAACGATTATGCTTTAGCTACACCCAACGCTGCAAATACCCCCCGTACACCTGCTCCTACAACTGATAGAATACTTCAAgaAGCGCAAAACATGATGGCGTTGAGTCATGTGGATACACCGTTGAAAGGAGGTGTCAATACGCCTTTGTACAACCCGGATTTTGGAGCTCACCCACAGTCTGAACACATAACAACACCAAACACTTTGCTTGCCACACCTTTTTCAAACAGATCACAACCAGATGGTAGGACACCAGGATTTCAAACACCGAAGGATGTTCATGGTGGATTAGCAACTCCAACTCCAGTTAGAGATAAACTTAACATTAACCCTGAGGAAGCCAGTATGGGTGGAGACACTCCATTGACTGTACAACAGACTCAAGTAAAGGAGCAACTTAGGGCAAGCCTTAGATCACTGCCACAGCCGAAAAATGATTATGAGATTGTAGTTCCTGAAGATGAAGTTACTAGTGAGGAGAACAAGTCGGCTTCAGCAATGGAGGTTGAAGATCAATCTGAAATAGATGAGAGACATTTGGCTTCACTCGCCGAGCAAAGAGAAAAGGAGTTGAGAAGTAGATCTCAAGTCATACAAAGATCGTTGCCCAGACCTGCCGATATTAATATCGTGTTGAGGCCGGCAAATACAGATCCACCTTTGACCGATTTGCAAAaagctGAAGAACTTATCAAACAAGAAATGATAGTTATGTTACATTATGATGCGGTACAAAATGGAGATCCACCTATGGCAGCACGTAAAACGAGTAGTAATCTTCAGGCACAACATTTAGCCCATTTAGAACAGCATCCTTATGAATCATTcacagaagaagaaataaaaaagGCTAAAGAAATCCTCCAAGCGGAAATGGAAGTGGTGAAGCAAGGTATGAACCATGGTGAACTGTCTTTAGATACATTTACTCAAGTTTGGGAAGAATGCTTAGGACAAGTGCTATTTTTGCCGAGTCAAAATAGGTACACAAGAGCCAATCTAGCTAGCAAGAAGGACAGATTAGAATCGGTTGAAAAAAGATTGGAGCAGAATCGAACGCACATGACAAGAGAGGCCAAGAGGGCtgcaaaaatggaaaagaaaattaaaataattacaggaGGCTATCaaACTAGGGCACAGGCTTTAATAAAGCAACTCCAAGATGTTACTGAACAAATTGACCAAGCGCACATGGAAAGGTCCACATTCCAGGTTTTACAACAACAAGAAGAAAATGCTATTCCTAGAAGAATTGAGGCAATTACTGAAGAAGTAAGCCGACAGCTTGATAGAGAAAAGGCCCTGCAAAGAAAATTTAGCCAATTGCAAATACTCGTTCAACCATCAATACACAgtgaaatttga
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDGADDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEFASRQKRKRGINYNAEIPFEKKPVPGFFDTSNEIIDPHLPNFHRLRQQNLDGELRSEKEEKERRKDKQKVKQRKENDMPLTMLQNQEPAKKRSKLVLPAPQISDQELQQVVKLGRASYAAREAVSEGNESAADTLLNDYALATPNAANTPRTPAPTTDRILQEAQNMMALSHVDTPLKGGVNTPLYNPDFGAHPQSEHITTPNTLLATPFSNRSQPDGRTPGFQTPKDVHGGLATPTPVRDKLNINPEEASMGGDTPLTVQQTQVKEQLRASLRSLPQPKNDYEIVVPEDEVTSEENKSASAMEVEDQSEIDERHLASLAEQREKELRSRSQVIQRSLPRPADINIVLRPANTDPPLTDLQKAEELIKQEMIVMLHYDAVQNGDPPMAARKTSSNLQAQHLAHLEQHPYESFTEEEIKKAKEILQAEMEVVKQGMNHGELSLDTFTQVWEECLGQVLFLPSQNRYTRANLASKKDRLESVEKRLEQNRTHMTREAKRAAKMEKKIKIITGGYQTRAQALIKQLQDVTEQIDQAHMERSTFQVLQQQEENAIPRRIEAITEEVSRQLDREKALQRKFSQLQILVQPSIHSEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01365379;
90% Identity
-
80% Identity
-