Basic Information

Gene Symbol
CDC5L
Assembly
GCA_011037195.1
Location
JAAEAF010002706.1:83607-90896[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-16 4.9e-13 51.0 1.5 2 46 9 54 8 54 0.97
2 3 4.2e-12 1.8e-08 36.4 0.1 1 45 60 103 60 104 0.93
3 3 5 2.1e+04 -2.3 0.2 3 14 615 626 614 629 0.78

Sequence Information

Coding Sequence
ATGCCGCGAATAATGATTAAGGGTGGTGTTTGGAGGAACACAGAAgaTGAAATTCTCAAAGCTGCTGTTatgaaatatggaaaaaatcagTGGTCTCGAATTGCCTCTTTATTACATAGGAAGTCCGCAAAGCAATGTAAAGCTCGATGGTTTGAATGGCTAGATCCAAGCATTAAGAAAACAGAATGGAGCAGAGAAGAAGACGAAAAACTTCTTCATTTGGCCAAATTGATGCCTACTCAATGGCGTACAATAGCTCCAATAATTGGAAGAACCGCTGCACAATGTTTAGAAAGATACGAATACCTCTTAGATCAAGcccaaaagaaagaagaaggagAGGATGGTGCTGATGATCCTAGGAAACTAAAACCTGGAGAAATAGATCCTAATCCAGAAACTAAACCCGCTCGTCCCGATCCTAAAGATATGGACGAAGATGAGCTGGAAATGCTGTCTGAAGCGAGAGCACGTCTTGCCAATACTCAAGGAAAGAAAGCTAAAAGGAAAGCTAGGGAAAAACAGTTGGAAGAGGCGAGGAGACTTGCAGCGTTGCAGaaacgCCGAGAACTTCGTGCAGCCGGAATTGAATTTGCAGCAAAGCAAAAAAGGAAACGTGGAATTGATTATAACGCTGAAATACCTTTTGAAAAGAAACCGGCAGCTGGTTTTTATGATACCAGTAATGAAGTAATAGATCCACATACACCAAATTTCAGCAGGTTGAGACAGCAGAATCTCGATGGAGAACTTAGAAGCGAGAAGGAAGAGagagaaaggaaaaaagataaGCAAAAAATCAAACAACGTAAAGAGAACGATATGCCTTTAGCAATGTTGCAAAATCAAGAACCAGTAAAGAAGAGGAGCAAATTAGTTCTTCCAGCGCCACAAATTTCGGaccaggaattacAACAAGTGGTGAAACTTGGACGGGCGAGCTATGCAGCTCGTGAAGCTGTTACAGAGGGTAATGAGTCTGCTGCTGATACACTTCTCAATGATTATGCACTGGCCACTCCTAATCCAGCAACTACTCCTAGAACTCCAGCCCCTACAACAGATAGGATTCTtcaagaAGCCCAAAACATGATGGCCTTAAGTCATGTGGATACGCCTCTTAAAGGTGGCCTAAATACGCCACTTTACAATCCTGATTTCAATCTTCATCCACAAAAAGAAGACATCACTACTCCTAATACTGTGCTCACAACACCGTTTTCTAATCGAACACAGGAAGGTAGAACACCTGGCTTCCAGACTCCACGAGATGGAAAGACAACCCTAAATACACCAGTCAGGGACAAACTCAATATAAATCCTGAAGATTCTGTATCAGTAGGAACGGCAGAAACACCAGTTCCAAACAATTTTCATAATCAAcaaATGAAAGAACACTTAAGGTCTGGTCTTCGGTCTCTGCCTCGGCCAAGAAACGATTATGAAATCGTAGTACCAGAAGAAGATACTGGAAGTAGCGCTATAGAAGAAAGCCAAACAGAAACAGCAGATTCTGGCAGCAAAGTCGAGGACCAAGCAGATGTAGATTCTAGAAATTTGGCTTTAATACAACAgcaaaGAGAGAAAGAACTTCGAAGTAGATCCCAAGTGATTCAGAGGAATTTCCCGAGGCCTTTAGATATTAACATCGTACTTAGACCACCAAATACTGACCCTCCCCTAACAGATTTGCAAAAGGCAGAAGAACTGATTAAACAGGAAATGATAACTATGTTACATTATGATGCGTTACAAAATGGAGATCCTCCAGCAGCCAATAGGAAAACGCCTACAAACTTGCAAGCGCAACATTTAGCTTATTTAGAACAGCATCAATATGAAACATTCAccgaagaagaaatgaaaaaggctAAAGAAGTATTAAAATCAGAGATGGAAGTTGTGAAGATGGGAATGAATCATGGTGAACTTTCTTTGGATACTTTTACTCAAGTTTGGGAAGAATGTTTGGCACAGGTGTTATATTTACCAACTCAAAACAGATACACAAGAGCAAATTTGGCCAGCAAAAAGGATCGTCTTGAGGCCATAGAAAAAAGATTAGAACAGAATAGACAACATATGACGAGGGAAGCAAAAAGAGCTGCAAAAATGgagcataaaattaaaattatcactGGCGGTTATCAGTCTAGAGCGCAGGCGTTAATAAAACAACTTCAAGACGTTGTCGATCAAATTGATCAAGCACACATGGAACTATCTACGtttcaagttttaaaacaaCAAGAAGAAAGTGCAATTCCGAGGCGAATTGAAGTAAGTTTATGTAATGTCACGTATGTCTGGCTAACCAATCCCCAAACATAG
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDGADDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEFAAKQKRKRGIDYNAEIPFEKKPAAGFYDTSNEVIDPHTPNFSRLRQQNLDGELRSEKEERERKKDKQKIKQRKENDMPLAMLQNQEPVKKRSKLVLPAPQISDQELQQVVKLGRASYAAREAVTEGNESAADTLLNDYALATPNPATTPRTPAPTTDRILQEAQNMMALSHVDTPLKGGLNTPLYNPDFNLHPQKEDITTPNTVLTTPFSNRTQEGRTPGFQTPRDGKTTLNTPVRDKLNINPEDSVSVGTAETPVPNNFHNQQMKEHLRSGLRSLPRPRNDYEIVVPEEDTGSSAIEESQTETADSGSKVEDQADVDSRNLALIQQQREKELRSRSQVIQRNFPRPLDINIVLRPPNTDPPLTDLQKAEELIKQEMITMLHYDALQNGDPPAANRKTPTNLQAQHLAYLEQHQYETFTEEEMKKAKEVLKSEMEVVKMGMNHGELSLDTFTQVWEECLAQVLYLPTQNRYTRANLASKKDRLEAIEKRLEQNRQHMTREAKRAAKMEHKIKIITGGYQSRAQALIKQLQDVVDQIDQAHMELSTFQVLKQQEESAIPRRIEVSLCNVTYVWLTNPQT*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01365379;
90% Identity
iTF_01301567; iTF_01479366;
80% Identity
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