Scul010959.2
Basic Information
- Insect
- Stenichneumon culpator
- Gene Symbol
- bab1_1
- Assembly
- GCA_964017025.1
- Location
- OZ024773.1:7866744-7876444[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-17 1.6e-14 53.7 0.0 1 43 74 117 74 119 0.95 2 2 3.3 3.6e+03 -1.8 1.4 6 15 193 202 191 205 0.88
Sequence Information
- Coding Sequence
- ATGATGAGTACTTGCGCCTGTGAAAGGTTTGAGTTGAGCCAAATTTTGAAGGCCAAGTTGTTGGAATCTTCCCACGCTTGGCTCGGCGCCTCCACCTCCAATATATCAGCAGACAGCTATCAGTATCAGCTACAATCGCTCTGGCAAAAGTGCTGGAACACGAATTCGGGACTGGTGCACAATCTACGCTTCCGGGAACGTGGTCCATTGAAATCATGGCGACCGGAAACGATGGCCGAAGCGATCTTCAGCGTTCTCAAAGAAGGGCTGTCTCTCAGTCAAGCTGCCAGAAAGTACGACATCCCTTATCCGACATTTGTGCTGTACGCGAATCGAGTGCACAACATGCTCGGGCCTAGCTCCGATGGCGGGGCCGATCTTCGGCCGAAGGGTCGCGGCAGACCACAGAGGATTCTCCTGGGAGTGTGGCCAGACGAGCATATCCGGGGTGTAATACGCGCCGTTGTTTTTCGCGACGGTCACATAGTCAAGGACGAGCAGACCCCGATCTATCCGAGCTTGGCGAATTACGCGTGCAACGGCCCGGAGGGTGCGGTGAGCCCTGGTGCCGCTGCGGCTGCTGCGGTCGCCGCGGTCGCTCAAGgTCTTCGACATCAGATGTGCAGCATGGTAGCAGCAGCCCAGTCACACCAGCACGACATGATAGCGACGAACCTGTCGGCGAATTTTCAAGCTGCCGTACAAGTCAGTCAGCATCATTTGAACAACAACAGTCCCGcgagcaacaacaacaacaacaataacaacaataataggAATTCACCGTTGATACTTGGCCTGCCGAGTCCCGGATCCGGTGGTCCACCGGAGAGTCCCATGGAGGGCAGTCCGCTCGCGAGTCCACTCGCGCCTCTGATGGATCCTGCCCACATACCGAGCAGCGTCGAGGTCGGCATCGGCGTCAGCGGATTGACCTACAAGCCGACTCGCAGCTTCATCAGTCCGCGACCCGAAAATCTCTTCCAAGATGAAATCGCCGATCTCGTAAAGAGTCCTCACGGTCACAAGGATAAGGACAAAGTGCCGGTGAAACTCGAGCCACTATCGGACTCGCGAAGCGAGCAGTAA
- Protein Sequence
- MMSTCACERFELSQILKAKLLESSHAWLGASTSNISADSYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHIVKDEQTPIYPSLANYACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAQSHQHDMIATNLSANFQAAVQVSQHHLNNNSPASNNNNNNNNNNRNSPLILGLPSPGSGGPPESPMEGSPLASPLAPLMDPAHIPSSVEVGIGVSGLTYKPTRSFISPRPENLFQDEIADLVKSPHGHKDKDKVPVKLEPLSDSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00721169;
- 90% Identity
- iTF_01497315;
- 80% Identity
- -