Eisc004918.1
Basic Information
- Insect
- Exephanes ischioxanthus
- Gene Symbol
- bab1
- Assembly
- GCA_958510785.1
- Location
- OY294017.1:2397878-2412833[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-17 2e-14 53.4 0.0 1 43 150 193 150 195 0.95 2 2 3.8 4.1e+03 -2.1 1.4 6 15 271 280 269 283 0.88
Sequence Information
- Coding Sequence
- ATGGGCCAATACGAGAGTTCAACGATAACCGGCGGCTGTACGGCGAAGAACAACATTGTCAAAATCAGACTCTGGACCGTTAAAGATATCACCAACATCGAGGCGGCTCCGCCGTGGGCGAGCGCGTCTCGATCCGTCCTGTTTGATCCACCGAATTCGTACGCCGATTTCTCGCTTGCAGCGTCGGACATGCGAAACAGGGGCCGGAGAAAGCAACGCAGGGGCGTTGTGGAGAAGGAGGGCGAGAGTCCAGCGTTGTTGGAAGTTACTTTTCTCGTCCACGCCAAGTTGTTGGAATCTTCCCACGCTTGGCTCGGCGCCTCCACCTCCAATATATCAGACAGCTATCAGTATCAGCTACAGTCGCTCTGGCAAAAGTGCTGGAACACGAATTCGGGACTGGTGCACAATCTACGCTTCCGGGAACGCGGTCCGTTGAAATCATGGCGACCGGAAACGATGGCCGAAGCGATCTTCAGCGTTCTCAAGGAAGGGCTGTCTCTCAGTCAAGCTGCCAGaaagTACGACATCCCTTATCCGACATTCGTGCTGTACGCGAATCGAGTGCACAACATGCTCGGGCCTAGCTCCGATGGCGGGGCCGGTGAGTATCTTCGGCCGAAGGGTCGCGGCAGACCACAGAGGATTCTCCTGGGAGTGTGGCCGGACGAGCATATTCGGGGTGTAATACGCGCCGTTGTTTTTCGCGACGGTCACATAGTCAAGGACGAGCAGACCCCGATCTATCCGAGCTTGGCGAATTACGCGTGCAACGGCCCGGAGGGTGCGGTGAGCCCTGGTGCCGCTGCGGCTGCTGCGGTCGCCGCGGTCGCTCAAGgTCTTCGACATCAGATGTGCAGCATGGTAGCAGCAGCCCAGTCACACCAGCACGACATGATAGCGACGAACCTGTCGGCGAATTTTCAAGCTGCCGTACAAGTCAGTCAGCATCATTTGAACAACAACAGTCCCGcgagcaacaacaacaacaacaacaataacaataataggaATTCACCGTTGATACTTGGCCTGCCGAGTCCCGGATCCGGTGGTCCACCGGAGAGTCCTATGGAGGGCAGTCCGCTCGCGAGTCCACTCGCGCCTCTGATGGATCCTGCCCACATACCGAGCAGCGTCGAGGTCGGTATCGGCGTCAGCGGATTGACCTACAAGCCAACTCGCAGCTTCATCAGTCCGCGACCCGAAAATCTCTTCCAAGACGAAATCGCCGATCTCGTAAAGAGTCCTCACGGTCACAAGGACAAGGACAAAGTGCCGGTGAAACTCGAGCCACTATCGGACTCGCGAAGCGAGCAGTAA
- Protein Sequence
- MGQYESSTITGGCTAKNNIVKIRLWTVKDITNIEAAPPWASASRSVLFDPPNSYADFSLAASDMRNRGRRKQRRGVVEKEGESPALLEVTFLVHAKLLESSHAWLGASTSNISDSYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGGAGEYLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHIVKDEQTPIYPSLANYACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAQSHQHDMIATNLSANFQAAVQVSQHHLNNNSPASNNNNNNNNNNRNSPLILGLPSPGSGGPPESPMEGSPLASPLAPLMDPAHIPSSVEVGIGVSGLTYKPTRSFISPRPENLFQDEIADLVKSPHGHKDKDKVPVKLEPLSDSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01364553; iTF_00059369;
- 90% Identity
- -
- 80% Identity
- -