Basic Information

Insect: Spodoptera exigua
Gene Symbol: Sall1
Assembly: GCA_011316535.1
Location: CM022052.1:1832301-1841979[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.2 1.8e+02 3.3 0.3 2 23 7 28 6 28 0.96

2 14 0.53 42 5.2 0.1 1 23 1042 1065 1042 1065 0.91

3 14 4.8 3.8e+02 2.2 0.5 1 23 1143 1165 1143 1165 0.90

4 14 1.4e-05 0.0011 19.6 1.7 2 23 1168 1189 1167 1189 0.97

5 14 0.01 0.82 10.6 2.8 1 23 1195 1217 1195 1217 0.98

6 14 0.012 0.99 10.3 2.9 2 23 1224 1245 1223 1246 0.94

7 14 1 83 4.3 1.2 5 23 1259 1277 1258 1277 0.95

8 14 0.0033 0.26 12.1 0.6 3 23 1284 1305 1283 1305 0.97

9 14 0.0014 0.11 13.3 0.5 2 23 1322 1342 1321 1342 0.98

10 14 0.00056 0.045 14.6 0.9 1 20 1348 1367 1348 1370 0.89

11 14 0.00026 0.021 15.6 0.4 1 23 1378 1400 1378 1400 0.98

12 14 0.0048 0.38 11.6 7.2 1 23 1406 1428 1406 1428 0.98

13 14 5.4e-06 0.00043 20.9 1.0 1 23 1434 1458 1434 1458 0.98

14 14 0.0039 0.31 11.9 3.3 1 23 1464 1486 1464 1487 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.2	1.8e+02	3.3	0.3	2	23	7	28	6	28	0.96
2	14	0.53	42	5.2	0.1	1	23	1042	1065	1042	1065	0.91
3	14	4.8	3.8e+02	2.2	0.5	1	23	1143	1165	1143	1165	0.90
4	14	1.4e-05	0.0011	19.6	1.7	2	23	1168	1189	1167	1189	0.97
5	14	0.01	0.82	10.6	2.8	1	23	1195	1217	1195	1217	0.98
6	14	0.012	0.99	10.3	2.9	2	23	1224	1245	1223	1246	0.94
7	14	1	83	4.3	1.2	5	23	1259	1277	1258	1277	0.95
8	14	0.0033	0.26	12.1	0.6	3	23	1284	1305	1283	1305	0.97
9	14	0.0014	0.11	13.3	0.5	2	23	1322	1342	1321	1342	0.98
10	14	0.00056	0.045	14.6	0.9	1	20	1348	1367	1348	1370	0.89
11	14	0.00026	0.021	15.6	0.4	1	23	1378	1400	1378	1400	0.98
12	14	0.0048	0.38	11.6	7.2	1	23	1406	1428	1406	1428	0.98
13	14	5.4e-06	0.00043	20.9	1.0	1	23	1434	1458	1434	1458	0.98
14	14	0.0039	0.31	11.9	3.3	1	23	1464	1486	1464	1487	0.94

Sequence Information

Coding Sequence: ATGGATCAGCTCGCGGTGCAGTGTCCCGTATGCACGCTGTTCCTTCATAATGGGATCACCCTGGAGTCCCATTTGGATACACATCCCAAAGACCAAGTTATAAAAGCTTTGTGTAGTATAGCATCAAACTCTAAAAGCTCCAACTATGGTAGTAGAACTTCTACACCTGCACATTCTGAACGATCTTTCAGAAGCAGGTCACGGACTCCTGCTACAGATGACAGTGCCAAGTGGACTGCATCACGGAGCACTGAGCATGATCGTTATTGGCGTAGAACACCAAGCAGAACTTCTAAATCAACACCACTATCAAGTACATCTAGGAATGGTACACCTGATATAAGGATGCTGGATATGGGCTTTGAGAACCATGGTATGGCTGGCAGTAGTGTAGGACAACATGGGAACAATCCGTTTCTTTTAAAAGCAGACAAACTCCAGCAGACTTTTCAATCTCCACCAGTTTCAGACTTTGACCAGCAGTTTGTTTACTATCCAGATCAACAAGAAGACAGAGAGATCAAGTTTTCTCGAAGTGCTGAATATAGTGCAATGGACAATAGCAACAATATATTTCCTTACAATGTGCCAACTATGGCTGCTCCCAATATGAAACTTTTACCAACAGCAAGTAGAAAAACAGGTGACCTTGTCAAAATTCTACCAAAACCTAATAACATTCTACTTAAGACCAACATGGGTGGTGTGCAATATATAGGCCCAGGAGTCAAACCTATGGTAATGGTGCCATCACCACCTACATTTGTGCAGAAGAATGTGCAAAACAATATGATCATGACAGGAGGTGTACCAAACCCACAGTTGCAGATTGATACCAAAACAGTTCCACCTCCCCTAGGTAGTAATCCACTCAACCAAATGTCTTGTACTGGTGCATTCACTCCAGGGACTACTGTTGTTACCCAAAACTCACAAATTATCTATAGAGAAATGGTGCACAATATAGATGGTAAGCCTTTCATAACTACAATGCCTACTTTACTTGGAAATGAGAATGTGACCAATTTGTCTCAGGCTACCTCTATGTACCAGAATGTGATGGTTGTAGATCAGTTTGGAAACACTTCATGTATGTACACAACACCTCAACAAATGATGAACAAGGCATGCCCCACTTCCATGTATAATGAGACTGGGGCTATGATGCCAAGCATATCGATGGACAAGTCTGTTCAGAATATGAATGATCCTAAAACACTTATTATTGAGGTAGGCCCACTGGTGGCCCCTGCTTCTGACAATATTTGTGAGGATCCTAGTTCTACCATGTCTCAGCCAGTTGCAAAAAGTCCTGCTGAGAGCACTGACAGGTCATCAGACAATCTGGATCCCAAGTCCGAAATGTCAGGCAGTACTAAAGGCTTAAAGATTTTGAGTAATATCAAAGTTGAAGTTCCTGTGCAACATCACAAGAATATGGTAAACACTGTCATGGATCTAACTGGTCCTAATGAGTCTGACTATCCTGTGGAACGAGTAGATAGTCCTGAAAAGATTCTCCCAGATTTGGAAGATAACAACCAAATGTCTTCTGATGACACCCAGCCTTCAATGTCTAGTGGAGACAGTATGGCATCCCATACATTTTCTGTGATAAAAAATGTTGGTAACCCAAGTAAAAGTTCTGTAGATAACAAGTTGGACACAGACTTTTCAGATAGCTGTCCTGTGCCAGATTTAATATGCAATGAAAAACCTTCAATATCGCCATGTAGTGAGTTGTCAGAAAATGGTGAAAATTCTACAGACAGAACCTCAATATCTCCCAAGCCAGGGACTAATCAAGTTAGCCATAGTAATCTAGCTCTTCCAGAAAAGAAGATTCAACTTCCCCAGAAGCCATACAGGCACAACACACTAAGactgaacaatatttttgttaagaagCACAAGAAAGTTTTGCAAATTAAGAATGCCAAGAACTTTCCTGTGAGTCTTTCGAAGAAAACTGAGCATAGAGACACAGTTGCTTCGTCATCATCTGACAGAACCCCTGAAAAATTTACTATGAATAAAATGCACCAAACTGAAAAGACAGAATACAAAGAAAAGAGTCACCTGTTGCAAACAATATCCGTTGAAGAAATTAAGGAGGGTGATGAAAACAATGACTTTGATGCTGATACAGAGGAACAATCTATGGATATTGAACAAGTGGAAGCTGGTAGTCTGAATCAGTCGGAGTTTGGTGGCAACATGGACCTTATACAGGTGAAAGAGGAAATAAACTCGAGTAACGAAGGAGGGTTTAGTAACGAGACGTTGACTCCCTCCGACCGTATGCTAAATTCAATAGACTCATTGCGACCGATTAATGTTATTAACTACGGCAATATGTCCAATGAGGATTTTAACGAGGAAGCTAATGATCGAGAGTTACTAAATCTTGAAGGAACATCAAAGAACAAACAATTTGTCAATATGATGAACGAAAATTATTTTGGGGACAATATTTATGCAGATTACTTTACTCCAGATCGCGTCGAAGCGTTTGATGCCGAGCGCGAGGCGGCGTCGTTTAAGGACGGCGGTAAAGATGGTATGTACCTGTGGGGCGAGCCGTCGCAGAAAGACGACGAGTTTGTGCTGCCCAACTTTATACACGAGAGTTACAAGATAGCAGAGAGTAACGGGATAGATTATTCCGAGCTAGGTGCTAGAGACGTGCAGGCCGACGTCGAGGTGGACGGCTGCGAGCCGGACAGCAAGGCCGACGTGCTCAGCGAGGGCCGCAGCGACAGCGACGCGCCGCTCAACATCTGCGCCGACGAGCGCATGCCGCCGCGCGGCGAGCTCAGCGGACAGGAGAGCAACGGGGACATGGAATCGCCCTGGAGCGGGATGTATTCCGAGGTGACGCCCTCGGAGCCGTATGACCTGATCGCCAGAGAGAGCTGGGCCTCGGCATCCGACGGCTCGGACGTGGACGCTAATGACAAGGAGCCCATGTTAGTAATTGACGAGGACGTACCGGCGGCGACGACGTCACCGGCGGCGGTGGGTGCGAGTAGGGCGGCGGGTGAGGGGGCGACGCGCGGCGCGCGAggcgggcgcggggcgcgggccgCGCGGCCCGGTGGCAGCGGGGCGCGGCCGCGGCGCCACCGCTGCGCGACCTGCGGCGTCGGCGCCGCCACGCTCAAGGAGCTGCGCGCCCATAAGGCGCTGATGCACGCCGCGCCACACGCTGCCCCCGCTTCCTACAGCCGTCTCGTCACTGCCAGGACCATCATGAAGGAGGAGAAGCCTGACGACACTAATAACCCCCTAACGCCGATCGACTCTAAAGAATCAATATCGACCTCAATTCTGCAAGTGTACGAGAATATTCAAGTGGAAGAAGCCAAGCCTAAGATAGAAGTGGACCGTCTCATCAAACAAGAAGTAAAAAGAAAACGGAAAGACTATGTCTGTCCCACTTGTAAAGTGGACCAAGTTACGGAGACAGCATTCCACGAACATCTCAAAATACATCCGCTCGAGTGCCTCACGTGTGGGAAATGTTTCTTCAGGCGAGCGAACCTCGCACTGCATATAAAGACACATTTAGGAATTAAGAATTATAAATGCGAGGTGTGCGAGAAGCGGTTCCTGACGCGGCAGAAGTTGATGGAGCACCACAACGTGCACACGGGCCGCGCGCCCATCAAGTGCACGCTCTGCGACGACACCTTCCGCCGGTACTCCAACATGGTGCAACACAGGGACCGGCACCACCTGCAGAAGCGCGGCAAGGTGCGCGACTTCGTGTGCCAGTGCGGGCTCGTGCTGCACTCGCGCGCCAAGCTGCGCTGGCACCAGGAGACGCACGCCGAGCGGCCGCGCGCCTGCGACTACTGCAGCGACAAGTTCGTGCACGCCGCCTCCCTCACGCGCCACGTGCGTCGCGCACACAACCAGTACTTCCTCGCAGAGCGCCTGCAGGGCAAGCACGAGAACGTGCAGTGCCCCGTCTGCAAACAGGTGTACCTGAGATCCAACCTGCGGACGCACCTGCAGACGCACAGCGGCCAGCGGCCCTTCGTGTGCATCATCTGCAACAAGTCGTTCACGACGAAGTGGAACCTGAAGCTGCACCGCTGGACCCACATGTCCCGGTCGGCCAAGCCGTTCAAGTGCACGCTGTGCAAGGGCGCCTTCATCCGGCAGTCGGAGTACATCTCGCACATGAACGCGCACAAGTCGGTGCGGCCGTACACGTGCAACTACTGCGGATGCCAGTTCATCCGCAAGTACAACTGCCAGCGCCACGTCCGCGAGCACGAGAGCGCCAAGAAGTTCGTGTGCAAGGTGGCGGAGTGCGGCAAGTCGTTCCACCGCTCGTACTACCTGGCCGAGCACATGAAGGTCCACAGCGGCGCGCGCCCCTTCGCCTGCGCCGTCTGCGGCAAGACCTCCAGCAACAAGTCCAACCACAACAAGCACGTCAAGATCCACCACGCGCGCGAGCCCGTCGCCACCGAGGCCTAG
Protein Sequence: MDQLAVQCPVCTLFLHNGITLESHLDTHPKDQVIKALCSIASNSKSSNYGSRTSTPAHSERSFRSRSRTPATDDSAKWTASRSTEHDRYWRRTPSRTSKSTPLSSTSRNGTPDIRMLDMGFENHGMAGSSVGQHGNNPFLLKADKLQQTFQSPPVSDFDQQFVYYPDQQEDREIKFSRSAEYSAMDNSNNIFPYNVPTMAAPNMKLLPTASRKTGDLVKILPKPNNILLKTNMGGVQYIGPGVKPMVMVPSPPTFVQKNVQNNMIMTGGVPNPQLQIDTKTVPPPLGSNPLNQMSCTGAFTPGTTVVTQNSQIIYREMVHNIDGKPFITTMPTLLGNENVTNLSQATSMYQNVMVVDQFGNTSCMYTTPQQMMNKACPTSMYNETGAMMPSISMDKSVQNMNDPKTLIIEVGPLVAPASDNICEDPSSTMSQPVAKSPAESTDRSSDNLDPKSEMSGSTKGLKILSNIKVEVPVQHHKNMVNTVMDLTGPNESDYPVERVDSPEKILPDLEDNNQMSSDDTQPSMSSGDSMASHTFSVIKNVGNPSKSSVDNKLDTDFSDSCPVPDLICNEKPSISPCSELSENGENSTDRTSISPKPGTNQVSHSNLALPEKKIQLPQKPYRHNTLRLNNIFVKKHKKVLQIKNAKNFPVSLSKKTEHRDTVASSSSDRTPEKFTMNKMHQTEKTEYKEKSHLLQTISVEEIKEGDENNDFDADTEEQSMDIEQVEAGSLNQSEFGGNMDLIQVKEEINSSNEGGFSNETLTPSDRMLNSIDSLRPINVINYGNMSNEDFNEEANDRELLNLEGTSKNKQFVNMMNENYFGDNIYADYFTPDRVEAFDAEREAASFKDGGKDGMYLWGEPSQKDDEFVLPNFIHESYKIAESNGIDYSELGARDVQADVEVDGCEPDSKADVLSEGRSDSDAPLNICADERMPPRGELSGQESNGDMESPWSGMYSEVTPSEPYDLIARESWASASDGSDVDANDKEPMLVIDEDVPAATTSPAAVGASRAAGEGATRGARGGRGARAARPGGSGARPRRHRCATCGVGAATLKELRAHKALMHAAPHAAPASYSRLVTARTIMKEEKPDDTNNPLTPIDSKESISTSILQVYENIQVEEAKPKIEVDRLIKQEVKRKRKDYVCPTCKVDQVTETAFHEHLKIHPLECLTCGKCFFRRANLALHIKTHLGIKNYKCEVCEKRFLTRQKLMEHHNVHTGRAPIKCTLCDDTFRRYSNMVQHRDRHHLQKRGKVRDFVCQCGLVLHSRAKLRWHQETHAERPRACDYCSDKFVHAASLTRHVRRAHNQYFLAERLQGKHENVQCPVCKQVYLRSNLRTHLQTHSGQRPFVCIICNKSFTTKWNLKLHRWTHMSRSAKPFKCTLCKGAFIRQSEYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHESAKKFVCKVAECGKSFHRSYYLAEHMKVHSGARPFACAVCGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00908225;
90% Identity: iTF_01363399; iTF_01362588;
80% Identity: -