Basic Information

Insect: Spodoptera litura
Gene Symbol: Sall1
Assembly: GCA_002706865.1
Location: NC:1805701-1816976[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.2 1.2e+02 3.3 0.3 2 23 7 28 6 28 0.96

2 14 0.12 7 7.2 0.1 1 23 1051 1074 1051 1074 0.91

3 14 5.6 3.2e+02 1.9 0.7 1 23 1151 1173 1151 1173 0.92

4 14 1.4e-05 0.00079 19.6 1.7 2 23 1176 1197 1175 1197 0.97

5 14 0.01 0.57 10.6 2.8 1 23 1203 1225 1203 1225 0.98

6 14 0.013 0.75 10.2 2.8 2 23 1232 1253 1231 1254 0.95

7 14 1 58 4.3 1.2 5 23 1267 1285 1266 1285 0.95

8 14 0.0038 0.22 11.9 2.1 3 23 1292 1313 1291 1313 0.97

9 14 0.0014 0.077 13.3 0.5 2 23 1330 1350 1329 1350 0.98

10 14 0.00055 0.031 14.6 0.9 1 20 1356 1375 1356 1378 0.89

11 14 0.00026 0.015 15.6 0.4 1 23 1386 1408 1386 1408 0.98

12 14 0.0047 0.27 11.6 7.2 1 23 1414 1436 1414 1436 0.98

13 14 3.9e-06 0.00022 21.3 0.9 1 23 1442 1466 1442 1466 0.98

14 14 0.0039 0.22 11.9 3.3 1 23 1472 1494 1472 1495 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.2	1.2e+02	3.3	0.3	2	23	7	28	6	28	0.96
2	14	0.12	7	7.2	0.1	1	23	1051	1074	1051	1074	0.91
3	14	5.6	3.2e+02	1.9	0.7	1	23	1151	1173	1151	1173	0.92
4	14	1.4e-05	0.00079	19.6	1.7	2	23	1176	1197	1175	1197	0.97
5	14	0.01	0.57	10.6	2.8	1	23	1203	1225	1203	1225	0.98
6	14	0.013	0.75	10.2	2.8	2	23	1232	1253	1231	1254	0.95
7	14	1	58	4.3	1.2	5	23	1267	1285	1266	1285	0.95
8	14	0.0038	0.22	11.9	2.1	3	23	1292	1313	1291	1313	0.97
9	14	0.0014	0.077	13.3	0.5	2	23	1330	1350	1329	1350	0.98
10	14	0.00055	0.031	14.6	0.9	1	20	1356	1375	1356	1378	0.89
11	14	0.00026	0.015	15.6	0.4	1	23	1386	1408	1386	1408	0.98
12	14	0.0047	0.27	11.6	7.2	1	23	1414	1436	1414	1436	0.98
13	14	3.9e-06	0.00022	21.3	0.9	1	23	1442	1466	1442	1466	0.98
14	14	0.0039	0.22	11.9	3.3	1	23	1472	1494	1472	1495	0.94

Sequence Information

Coding Sequence: ATGGATCAGCTCGCGGTGCAGTGTCCCGTATGCACGCTGTTCCTTCACAATGGGATCACCCTAGAGTCCCATTTGGATACACATCCCAAAGACCAAGTTATAAAAGCTTTGTGTAGTATAGCATCAAACTCTAAAAGCTCCAATTATGGTAGTAGAACTTCTACACCTGCACATTCTGAACGATCATTCAGAAGCAGGTCACGAACTCCTGCTACAGATGACAGTGCCAAGTGGACTGCATCACGGAGCACTGAACATGATCGTTATTGGCGTAGAACACCAAGCAGAACTTCTAAATCAACACCATTATCAAGTACATCGAGGAATGGCACACCTGATATCAGAATGCTGGATATGGGGTTTGATAACCATGGTTTACCTGGCAGTAGTGTAGGACAACATGGAAACAATCCATTTCTTTTAAAAGCAGACAAGCTTCAGCAATCTTTTCAATCTCCTCCAGTTCCAGACTTTGACCAGCAGTTTGTTTACTATCCAGATCAACAAGAAGACAGAGAGATCAAATTTTCTCGAAGTGCTGAATATAGTGCAATGGATAATAGCAACAATATGTTCCCTTACAATGTGCCAACTATGGCAGCTCCAAATATGAAGTTGTTACCAACAGCAAGTAGGAAAGCAAGTGACCTTGTCAAAGTTCTACCTAAACCtaataacattttacttaaaaccAACATGGGTGGTGTGCAATATATAGGCCCGGGGGTCAAACCCATGGTAATGGTGCCATCTGCACCTACATTTGTGCAGAAGAATGTGCAAAACAATATGATCATGACAGGAGGTATACCAAACCCACAGATGCAGATTGATACCAAAACTGTTCCACCTCCCCTAGGTAGCAACCCACTCAACCAATTGTCTTGTAGTGGTGCGTTCACTCCGGGGACTACTGTTGTTACCCAAAACTCACAAATTATCTACAGAGAAATGGTGCACAATATAGATGGGAAGCCATTCATAACCACAATGCCTACTTTACTTGGAAATGagaatgtaaataatttgtctCAGGCTAGCTCTATGTATCAGAATGTGATGGTTGTAGATCAGTTTGGCAATACTTCATGTATGTACACAACACCTCAACAAATGATGAGCAAGGCGTGCCCCACATCCATGTATAATGAGACTGGGGCTATGATACCAAGCATAACAATGGACAAGTCTGTCCAGAGTATGAATGATCCTAAAACACTTATTATTGAGGTAGGCCCACTGGTTACCCCTGCTACTGACAATATTTGTGAAGATCCTAGTTCTTCTATGTCCCAACCAGTTGCTAATAGTCCTGCTGAGAGCACTGACAGAACTTCGGAGAATCTTGATCCCAAGTTAGAAATGTCAGGCAGTACTAAGGGCTTAAAGATTTTGAGTAACATCAAGGTCGAAGTGCCTGTGCAACATCACAAGAATATGGTAAACACGGTCATGGATCTTACTGGTCCTAATGAGTCGGACTACCCTGTTGAACGAGTAGATAGTCCTGAAAAGATCCTCCCAGATTTAGAAGATAACAACCAAATGTCTTCTGATGATACCCAGCCTTCAATGTCTAGTGGTGACAGCATGGCATCCCATACATTTTCTGTGATAAAAAATGTTGGTAATCCAAGTAAAAGTTCAGTTGATAATAAGTTGGATACAGACTTTTCAGATAGCTGTCCTGTGCCAGATTTAATATGCAATGAGAAACCTTCCATATCACCATGTAGTGAGTTGTCAGAAAATGGTGACAATTCTACTGATAGAACCTCAATATCTCCTAAGCCTGTGACTAGTCAAGTTAGCCATAGGAGTCTAGCTCTTCCAGAAAAGAAGATTCATCTTCCACAGAAGCCATACAGGCACAACACACTAAGactgaacaatatttttgttagaaaGCACAAGAAAGTTTTGCAAATTAAGAATGCCAAGAACTTTACTGTAAGTCTTTCAAAGAAAATTGAGCAAAGAGACACCAttgcttcatcatcatcagcttgcAGAACTCCTGAAAagtttattatgaataaaatgcaCCAAACTGAAAAGACAGACTGCAAAGAAAAGAGTAATCTCTTGCAAACAATATCTGTGGAAGAAATTAAGGAGAGTGATGAGAACAATGACTTTGATGCTGATACAGAGGAACAATCTATGGATATAGAACAAGTAGAAGCTGGTAGTCTGAATCATTCTGAATTTGGTGGCAACATGGACCTCATACAGGTGAAAGAGGAAATAAATTCGAGCAATGAAGGAGGGTTTAGTAATGAGACCATGACTCCATCTGACCGTATGCTGAATTCAATAGACTCATTGCGAcctattaatgttattaattacgGCAATATGTCCAACGAGGATTTTAACGAGGAAGCTAATGACCGCGAATTATTAAATCTGGAAGGAACATCAAAAACCAAACAATTTGTCAATATGATGAACGAAAATTACTTTGGGGACAATATTTATGCGGATTACTTTACTCCAGATCGCGTCGAAGCGTTTGATGCGGAACGCGAGGCGGCGTCGTTTAAGGATGGCGGTAAAGATGGTATGTACCTGTGGGGCGAGCCGTCGCAGAAAGACGACGAGTTTGTGCTGCCCAACTTTATACACGAGAGTTACAAGATAGCAGAGAGTAACGGGATAGATTATTCCGAGCTAGGTGCTAGAGACGTGCAGGCGGACGTCGAGGTGGACGGCTGCGAGCCAGACAGCAAGGCCGACGTGCTCAGCGAGAGCCGCAGCGACAGCGACGCGCCGCTCAACATCTGTGCCGACGAGCGCATGCCGCCGCGCGGCGAGCTCAGCGGCCAGGAGAGCAACGGGGACATGGAATCGCCCTGGAGCGGGATGTATTCCGAGGTGACGCCCTCGGAGCCGTATGACTTGATCGCCAGAGAGAGCTGGGCGTCGGCCTCCGACGGCTCAGACGTAGACACTAATGACAAGGAGCCTATGTTAGTAATTGACGAGGACGTACCGATAGCAACGCCGTCACCGGCGGTGGTGAACGCAAACAGGGCCGCTGCAGGGGGTGCAGGGCGGGCGGGGCGCGCCGGTCGGGGCGCTGGCGGCGCCGGGCGGGCGCGGCCGGGCGCCAGCGGGGCTCGTATAAGCGGGGCTCGCGCGCGGCGCCACACGTGTGCTGCGTGCGGCGCCACTGTGTCCACGCTGAAGGAGCTGCGCGCGCACAAGGCGCTGCTGCACGGCGCGCCGCACGCGCCCGCGTCCTACAGCCGCCTCGTCACCGCGCGGGCCATCATGAAGGAGGAGAAACCTGACGACACCAATAACCTTCTAACGCCGATTGACTCTAAAGATTCAATATCGTCCTCGATACTGCAAGTGTACGAGAATATTCAAGTGGAAGAAGCCAAGCCTAAGATAGAAGTAGACCGTCTGATCAAACAAGAAGTTAAGAGAAAACGGAAAGACTATGTCTGTCCCACGTGTAAAGTGGACCAAGTTACGGAGACATTATTTCACGAACATCTCAAGATACATCCGCTCGAGTGCCTCACGTGTGGGAAATGTTTCTTCCGTCGAGCAAACCTCGCACTGCATATAAAGACGCATCTAGGAATTAAGAATTATAAATGCGAGGTATGCGAGAAGCGGTTCCTGACGCGGCAGAAGTTGATGGAGCACCACAACGTGCACACGGGGCGCGCGCCCGTCAAGTGCACGCTCTGCGACGACACCTTCCGCCGGTACTCCAACATGGTGCAGCACAGGGACCGGCACCACCTGCACAAGCGCGGCAAGGTGCGCGACTTCGTGTGCCAGTGCGGGCTCGTGCTGCACTCGCGCGCCAAGCTGCGCTGGCACCAGGAGACGCACGCCGAGCGGCCGCGCGCCTGCCACTACTGCAGCGACAAGTTCGTGCACGCCGCCTCGCTCACCCGCCACGTGCGCCGCGCGCACAACCAGTACTTCGTCGCCGAGCGCCTGCAGGGCAAGCAGGACAACGTGCAGTGCCCCGTCTGCAAACAGGTGTATCTGAGATCCAACCTACGGACGCACCTGCAGACCCACAGCGGCCAGCGACCCTTCGTGTGCATCATCTGCAACAAGTCGTTCACCACCAAGTGGAACCTCAAACTGCACCGTTGGACGCACATGTCTCGGTCGGCCAAGCCGTTCAAGTGCACGCTGTGCAAGGGAGCCTTCATCCGACAGTCGGAGTACATCTCCCACATGAACGCGCACAAGTCGGTGCGGCCGTACACGTGCAACTACTGCGGCTGCCAGTTCATCCGCAAGTACAACTGCCAGCGCCACGTGCGCGAGCACGAGTCGGCCAAGAAGTACGTGTGCAAGGTGGCGGAGTGCGGCAAGTCGTTCCACCGCTCGTACTACCTGGCCGAGCACATGAAGGTGCACAGCGGCGCGCGCCCCTTCGCCTGCGCCGTCTGCGGCAAGACGTCCAGCAACAAGTCCAACCACAACAAGCACGTCAAGATCCACCACGCGCGCGAGCCCGTCGCCACCGAGGCCTAG
Protein Sequence: MDQLAVQCPVCTLFLHNGITLESHLDTHPKDQVIKALCSIASNSKSSNYGSRTSTPAHSERSFRSRSRTPATDDSAKWTASRSTEHDRYWRRTPSRTSKSTPLSSTSRNGTPDIRMLDMGFDNHGLPGSSVGQHGNNPFLLKADKLQQSFQSPPVPDFDQQFVYYPDQQEDREIKFSRSAEYSAMDNSNNMFPYNVPTMAAPNMKLLPTASRKASDLVKVLPKPNNILLKTNMGGVQYIGPGVKPMVMVPSAPTFVQKNVQNNMIMTGGIPNPQMQIDTKTVPPPLGSNPLNQLSCSGAFTPGTTVVTQNSQIIYREMVHNIDGKPFITTMPTLLGNENVNNLSQASSMYQNVMVVDQFGNTSCMYTTPQQMMSKACPTSMYNETGAMIPSITMDKSVQSMNDPKTLIIEVGPLVTPATDNICEDPSSSMSQPVANSPAESTDRTSENLDPKLEMSGSTKGLKILSNIKVEVPVQHHKNMVNTVMDLTGPNESDYPVERVDSPEKILPDLEDNNQMSSDDTQPSMSSGDSMASHTFSVIKNVGNPSKSSVDNKLDTDFSDSCPVPDLICNEKPSISPCSELSENGDNSTDRTSISPKPVTSQVSHRSLALPEKKIHLPQKPYRHNTLRLNNIFVRKHKKVLQIKNAKNFTVSLSKKIEQRDTIASSSSACRTPEKFIMNKMHQTEKTDCKEKSNLLQTISVEEIKESDENNDFDADTEEQSMDIEQVEAGSLNHSEFGGNMDLIQVKEEINSSNEGGFSNETMTPSDRMLNSIDSLRPINVINYGNMSNEDFNEEANDRELLNLEGTSKTKQFVNMMNENYFGDNIYADYFTPDRVEAFDAEREAASFKDGGKDGMYLWGEPSQKDDEFVLPNFIHESYKIAESNGIDYSELGARDVQADVEVDGCEPDSKADVLSESRSDSDAPLNICADERMPPRGELSGQESNGDMESPWSGMYSEVTPSEPYDLIARESWASASDGSDVDTNDKEPMLVIDEDVPIATPSPAVVNANRAAAGGAGRAGRAGRGAGGAGRARPGASGARISGARARRHTCAACGATVSTLKELRAHKALLHGAPHAPASYSRLVTARAIMKEEKPDDTNNLLTPIDSKDSISSSILQVYENIQVEEAKPKIEVDRLIKQEVKRKRKDYVCPTCKVDQVTETLFHEHLKIHPLECLTCGKCFFRRANLALHIKTHLGIKNYKCEVCEKRFLTRQKLMEHHNVHTGRAPVKCTLCDDTFRRYSNMVQHRDRHHLHKRGKVRDFVCQCGLVLHSRAKLRWHQETHAERPRACHYCSDKFVHAASLTRHVRRAHNQYFVAERLQGKQDNVQCPVCKQVYLRSNLRTHLQTHSGQRPFVCIICNKSFTTKWNLKLHRWTHMSRSAKPFKCTLCKGAFIRQSEYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHESAKKYVCKVAECGKSFHRSYYLAEHMKVHSGARPFACAVCGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00908225;
90% Identity: iTF_01361974;
80% Identity: -