Basic Information

Insect: Spodoptera frugiperda
Gene Symbol: Sall1
Assembly: GCA_011064685.1
Location: JANIPB010001773.1:53738-60020[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.5 1.8e+02 3.3 0.3 2 23 7 28 6 28 0.96

2 14 0.018 2 9.4 0.1 1 23 1042 1065 1042 1065 0.92

3 14 4 4.6e+02 2.0 0.7 1 23 1142 1164 1142 1164 0.92

4 14 1e-05 0.0011 19.6 1.7 2 23 1167 1188 1166 1188 0.97

5 14 0.0072 0.82 10.6 2.8 1 23 1194 1216 1194 1216 0.98

6 14 0.0095 1.1 10.2 2.8 2 23 1223 1244 1222 1245 0.95

7 14 0.73 84 4.3 1.2 5 23 1258 1276 1257 1276 0.95

8 14 0.00071 0.082 13.8 0.6 3 23 1283 1304 1282 1304 0.97

9 14 0.00098 0.11 13.3 0.5 2 23 1321 1341 1320 1341 0.98

10 14 0.00039 0.045 14.6 0.9 1 20 1347 1366 1347 1369 0.89

11 14 0.00014 0.016 16.0 0.4 1 23 1377 1399 1377 1399 0.98

12 14 0.0034 0.39 11.6 7.2 1 23 1405 1427 1405 1427 0.98

13 14 2.8e-06 0.00032 21.3 0.9 1 23 1433 1457 1433 1457 0.98

14 14 0.0027 0.31 11.9 3.3 1 23 1463 1485 1463 1486 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.5	1.8e+02	3.3	0.3	2	23	7	28	6	28	0.96
2	14	0.018	2	9.4	0.1	1	23	1042	1065	1042	1065	0.92
3	14	4	4.6e+02	2.0	0.7	1	23	1142	1164	1142	1164	0.92
4	14	1e-05	0.0011	19.6	1.7	2	23	1167	1188	1166	1188	0.97
5	14	0.0072	0.82	10.6	2.8	1	23	1194	1216	1194	1216	0.98
6	14	0.0095	1.1	10.2	2.8	2	23	1223	1244	1222	1245	0.95
7	14	0.73	84	4.3	1.2	5	23	1258	1276	1257	1276	0.95
8	14	0.00071	0.082	13.8	0.6	3	23	1283	1304	1282	1304	0.97
9	14	0.00098	0.11	13.3	0.5	2	23	1321	1341	1320	1341	0.98
10	14	0.00039	0.045	14.6	0.9	1	20	1347	1366	1347	1369	0.89
11	14	0.00014	0.016	16.0	0.4	1	23	1377	1399	1377	1399	0.98
12	14	0.0034	0.39	11.6	7.2	1	23	1405	1427	1405	1427	0.98
13	14	2.8e-06	0.00032	21.3	0.9	1	23	1433	1457	1433	1457	0.98
14	14	0.0027	0.31	11.9	3.3	1	23	1463	1485	1463	1486	0.94

Sequence Information

Coding Sequence: ATGGATCAGCTCGCGGTGCAGTGCCCCGTATGCACGCTGTTCCTTCACAATGGGATCACCTTGGAGTCCCATTTGGATACACATCCCAAAGACCAAGTTATAAAAGCTTTGTGTAGTATAGCATCAAACTCTAAAAGCTCCAATTATGGTAGTAGAACTTCTACACCTGCACATTCTGAACGATCATTCAGAAGCAGGTCACGGACTCCTGCTACAGATGACAGTACCAAGTGGCCTGCATCACGGAGCAATGAACATGATCGTTATTGGCGTAGAACACCAAGCAGAACTTCTAAATCAACACCATTGTCAAGTACGTCTAGGAATGGCACACCTGATATCAGGATGTTGGATATGGGTTTTGAGAACCATGGTTTGCCTGGCAGTAGTGTAGGACAACATGGAAACAATCCATTTCTTTTAAAAGCAGATAAGCTTCAGCAAACATTTCAATCTCCTCCAGTCCCAGACTTTGACCAGCAGTTTGTTTACTATCCGGACCAACAAGAAGACAGAGAGATCAAGTTTTCTCGAAGTGCTGAATATAGTGCAATGGACAGTAGCAACAATATGTTTCCTTACAATGTGCCAACTATGGCTGCTCCCAATATGAAATTGTTACCAACATCAAGTAGGAAAGCAGGTGACCTTGTCAAAGTTCTACCTAAACCTAATAACATTTTACTTAAGACCAACATGGGTGGTGTGCAATATATAGGCCCAGGGGTCAAACCCATGGTAATGGTGCCATCCGCACCTACTTTTGTACAGAAGAATGTGCAAAACAATATGATCATGACAGGAGGTATATCAAACCCACAGATGCAGATTGATACCAAAACAGTTCCACCTCCACTAGGTAGCAACCCTCTCAACCAAATGTCTTGTACTAGTGCATTCACTCCGGGGACTACTGTTGTTACCCAAAACTCACAAATTATCTACAGAGAAATGGTGCACAATATAGATGGAAAGCCATTCATAACCACAATGCCTACATTACTTGGAAACGAGAATGTGAATAACTTGTCTCAGGCTAGCTCTATGTATCAGAATGTGATGGTTGTTGATCAGTTCGGAAATACTTCATGTATGTACACAACACCTCAACAAATGATGAGCAAAGCATGTCCCACATCTATGTATAATGATACCGGAGCTATGATGCCCAGCATATCAATGGACAAGTCTGTTCAGAGTATGAATGATCCAAAAACACTTATTATTGAGGTAGGCCCACTGGTTGCCCCTGCTACTGACAATATTTGTGAAGATCCTAGTTCTTCTATGTCCCAGCCGGTTGCGAACAGTCCTGCCGACAGCACTGACAGATCTTCAGACAATGTTGATGCCAAGTTAGAAATGTCAGGTGGTACTAAGGGCTTAAAGATTCTGAGTAACATCAAGGTTGAAGTTCCTGTGCAACATCACAAGAATATGGTAAACACCGTCATGGATCTTACTGGCCCTAGTGAGTCAGACTACCCTGTGGAACGAGTAGATAGTCCTGAAAAGATCCTCCCAGATTTAGAGGATAACAACCAAATGTCTTCTGATGACACCCAGCCTTCAATGTCTAGTGGAGACAGCATGGCATCCCATACATTTTCTGTGATAAAAAATGTTGGTAATCCAAGTAAAAGTTCTGTAGATAATAAGTTGGATACAGACTTTTCAGATAGCTGTCCTGTGCCAGATTTAATATGCAATGAGAAACCTTCCATATCACCATGTAGTGAGTTGTCAGAGAATGGTGACAATTCTACTGATAGAACCTCAATATCTCCTAAGCCGGTGACTAATCAAATTAGCCGTAGTAATCTAGCTCTTCCAGAAAAGAAGACCCAACTTCCCCAGAAGCCTTACAGGCACAACACACTAAGACTGAACAATATCTTTGTTAAGAAGCACAAGAAAGTTTTGCAAATTAAGAATGCCAAGTCCTTAACTGTGAGTCTTTCAAAGAAAATTGAGCAAAGAGACTCTATGGCTTCATCATCATCAGCTTGCAGAACTCCTGAAAAGTTTACTATGAATAAAATGCACCAAACTGATAAGACAGACTGCAAAGAAAAGAGTAATCTCTTGCAAACAATATCTGTTGAAGAAATTAAGGAGGGTGATGAGAACAATGACTTTGATGCTGATACAGAGGAGCAATCTATGGATATAGAACAAGTGGAAGCTGGCAGTCTGAATCAGTCTGAATTTGGTGGCAACATGGACCTCATACAGGTGAAAGAGGAAATAAACTCAAGCAATGAAGGAGCATTTAGTAATGAGACCATGACTCCATCTGACCGTATGCTAAATTCAATAGACTCATTGCGACCTATTAATGTTATTAACTACGGCAATATGTCCAACGAGGGTTTCAACGAGGAAGCTAATGACCGAGAATTGTTAAATCTGGAAGGAACATCAAAAACCAAGCAATTTGTCAATATGATGAACGAAAATTATTTTGGGGACAACATATACGCGGATTACTTTACTCCAGACCGCGTCGAAGCGTTTGATGCGGAACGTGAGGCGGCGTCGTTTAAGGATGGCGGTAAAGATGGTATGTACCTGTGGGGCGAGCCGTCGCAGAAAGACGACGAGTTTGTGCTGCCCAACTTTATACACGAGAGTTACAAGATAGCAGAGAGTAACGGGATAGATTATTCCGAGCTAGGTGCTAGAGACGTGCAGGCGGACGTCGAGGTGGACGGCTGCGAGCCCGACAGCAAGGCCGACGTGCTCAGCGAGAGCCGCAGCGACAGCGACGCGCCGCTCAACATCTGCGCCGACGAGCGCATGCCGCCGCGCGGCGAGCTCAGCGGCCAGGAGAGCAACGGGGACATGGAGTCGCCCTGGAGCGGGATGTATTCCGAGGTGACGCCCTCGGAGCCGTATGACCTGATCGCCAGAGAGAGTTGGGCGTCTGCCTCCGACGGTTCAGACGTGGACGCTAATGACAAGGAGCCTATGTTAGTCATCAACGCCGTCGCGGCGGTGGTGAACGCAAACAGGGCCGCTGCAGGGGGCGCAGGGCGGGCGGGGCGCGGCGGCGGGGCGCTGGGGGGCGCTGGCGGCGCCGGGCGGGCGCGGGCGGGCGCCAGCACAGCTCGCGCGCGGCGCCACACGTGCGGCACGTGCGGCGCCAGCGTGGCCACGCTGAAGGAGCTGCGCGCGCACAAGGCGCTGCTGCACGCCGCGCCGCACGCGCCCGCCTCCTACAGCCGCCTCGTCACCGCGCGGGCCATCATGAAGGAGGAGAAACCCGACGACACCAATAACCTCCTAACGCCGATTGACTCTAAAGATTCGATATCGTCCTCGATACTGCAAGTGTATGAGAATATTCAAGTGGAAGAAGCCAAGCCTAAGATAGAAGTAGACCGTCTGATCAAACAAGAAGTTAAAAGAAAACGGAAAGACTACGTGTGTCCCACGTGTAAAGTGGACCAAGTTACAGAGACATTATTTCACGAACATCTCAAGATACATCCGCTCGAGTGCCTCACGTGTGGGAAATGTTTCTTCAGGCGAGCAAACCTCGCGCTGCATATAAAGACACATTTAGGAATTAAGAATTATAAATGCGAGGTGTGCGAGAAGCGGTTCCTGACGCGGCAGAAGCTGATGGAGCACCACAACGTGCACACGGGCCGCGCGCCCGTCAAGTGCACGCTCTGCGACGACACCTTCCGCCGGTACTCCAACATGGTGCAGCACAGGGACCGGCACCACCTGCACAAGCGCAGCAAGGTGCGCGACTTCGTGTGCCAGTGCGGGCTGGTGCTGCACTCGCGCGCCAAGCTGCGCTGGCACCAGGAGACGCACGCAGACCGCCCGCGGGCCTGCGACTACTGCAGCGACAAGTTCGTGCACGCCGCCTCGCTCACGCGCCACATCCGCCGCGCGCACAACCAGTACTTCCTCGCCGACCGCCTGCAGGGCAACAACGAGAACGTGCAGTGCCCCGTCTGCAAACAGGTGTACCTGAGATCCAACCTGCGGACGCACCTGCAGACCCACAGCGGCCAGCGGCCCTTCGTGTGTATCATCTGCAACAAGTCCTTCACCACCAAGTGGAACCTCAAGCTGCACCGCTGGACGCACATGTCCCGGTCCTCCAAGCCGTTCAAGTGCAATCTGTGCAAGGGCGCCTTCATCCGGCAGTCGGAGTACATCTCGCACATGAACGCGCACAAGTCGGTCCGGCCGTACACGTGCAACTACTGCGGCTGCCAGTTCATCCGCAAGTACAACTGCCAGCGCCACGTGCGCGAGCACGAGTCGGCCAAGAAGTACGTGTGCAAGGTGGCGGAGTGCGGCAAGTCGTTCCACCGCTCCTACTACCTGGCCGAGCACATGAAGGTGCACAGCGGCGCGCGCCCCTTCGCCTGCGCCGTCTGCGGCAAGACGTCCAGCAACAAGTCCAACCACAACAAGCACGTCAAGATCCACCACGCGCGCGAGCCCGTGGCCACGGAGGCCTAG
Protein Sequence: MDQLAVQCPVCTLFLHNGITLESHLDTHPKDQVIKALCSIASNSKSSNYGSRTSTPAHSERSFRSRSRTPATDDSTKWPASRSNEHDRYWRRTPSRTSKSTPLSSTSRNGTPDIRMLDMGFENHGLPGSSVGQHGNNPFLLKADKLQQTFQSPPVPDFDQQFVYYPDQQEDREIKFSRSAEYSAMDSSNNMFPYNVPTMAAPNMKLLPTSSRKAGDLVKVLPKPNNILLKTNMGGVQYIGPGVKPMVMVPSAPTFVQKNVQNNMIMTGGISNPQMQIDTKTVPPPLGSNPLNQMSCTSAFTPGTTVVTQNSQIIYREMVHNIDGKPFITTMPTLLGNENVNNLSQASSMYQNVMVVDQFGNTSCMYTTPQQMMSKACPTSMYNDTGAMMPSISMDKSVQSMNDPKTLIIEVGPLVAPATDNICEDPSSSMSQPVANSPADSTDRSSDNVDAKLEMSGGTKGLKILSNIKVEVPVQHHKNMVNTVMDLTGPSESDYPVERVDSPEKILPDLEDNNQMSSDDTQPSMSSGDSMASHTFSVIKNVGNPSKSSVDNKLDTDFSDSCPVPDLICNEKPSISPCSELSENGDNSTDRTSISPKPVTNQISRSNLALPEKKTQLPQKPYRHNTLRLNNIFVKKHKKVLQIKNAKSLTVSLSKKIEQRDSMASSSSACRTPEKFTMNKMHQTDKTDCKEKSNLLQTISVEEIKEGDENNDFDADTEEQSMDIEQVEAGSLNQSEFGGNMDLIQVKEEINSSNEGAFSNETMTPSDRMLNSIDSLRPINVINYGNMSNEGFNEEANDRELLNLEGTSKTKQFVNMMNENYFGDNIYADYFTPDRVEAFDAEREAASFKDGGKDGMYLWGEPSQKDDEFVLPNFIHESYKIAESNGIDYSELGARDVQADVEVDGCEPDSKADVLSESRSDSDAPLNICADERMPPRGELSGQESNGDMESPWSGMYSEVTPSEPYDLIARESWASASDGSDVDANDKEPMLVINAVAAVVNANRAAAGGAGRAGRGGGALGGAGGAGRARAGASTARARRHTCGTCGASVATLKELRAHKALLHAAPHAPASYSRLVTARAIMKEEKPDDTNNLLTPIDSKDSISSSILQVYENIQVEEAKPKIEVDRLIKQEVKRKRKDYVCPTCKVDQVTETLFHEHLKIHPLECLTCGKCFFRRANLALHIKTHLGIKNYKCEVCEKRFLTRQKLMEHHNVHTGRAPVKCTLCDDTFRRYSNMVQHRDRHHLHKRSKVRDFVCQCGLVLHSRAKLRWHQETHADRPRACDYCSDKFVHAASLTRHIRRAHNQYFLADRLQGNNENVQCPVCKQVYLRSNLRTHLQTHSGQRPFVCIICNKSFTTKWNLKLHRWTHMSRSSKPFKCNLCKGAFIRQSEYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHESAKKYVCKVAECGKSFHRSYYLAEHMKVHSGARPFACAVCGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00908225;
90% Identity: iTF_01361974;
80% Identity: -