Sexi010750.1
Basic Information
- Insect
- Spodoptera exigua
- Gene Symbol
- retn
- Assembly
- GCA_011316535.1
- Location
- CM022065.1:9434076-9442962[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-19 7.3e-16 58.7 0.0 18 89 81 150 65 150 0.92 2 2 5.2 1.3e+04 -3.1 0.0 25 38 278 291 240 292 0.56
Sequence Information
- Coding Sequence
- ATGGGCGGCCGGGCCGGGCTCGCGGCCGCCGCTCATTGGCCCGCCGCGGGGTTGTCGGGCTCCAAGGGCCTTGATACTGCTCTCGATAAGCGGGAGGCGTCCAATGTCGATTCGATCGATTATCGGCCGTGTCGTCGCGCGCCGGCGACCGCGACGTCCGCCGGCCGCACGCACGCACCGCCAGCCTTTACCGCACTTGACACTTTGATGACCCGCGCCGCGTCATTAATATCTCTGTGTACACCCATCAACAGACTACCGATAATGGCTAAATCAGTGCTAGATCTGTACGAGCTCTACAACCTGGTGATAGCCCGCGGCGGTCTGGTGGAGGTGATTAACAAGAAGCTGTGGCAGGAGATCATCAAAGGACTCCGGCTACCGTCCTCCATCACATCTGCCGCGTTCACCTTACGCACACAGTACATGAAATACTTGTATGATTACGAGTGTGAGAAGAAGAACCTGTCTACCAGAAGTGAGCTGGATGCGGCCATTGAAGGCAACAAGCGAGAAGGGCGTCGAGCATCAGGACAGTATGATGCTCAAGCAGCTTTGGCTATGCCCCCTCTAAACCGCGTCCCCGCGTCTCTGGCGCAGCTGTCCCAGCATATGCAGCCGCTGTCACTGTCTCTGGGGGGCGTGGCCCCGCGCCTGCCGCCGCTACCGCCGCATGCGCCGCATCTTGGCCAGCACGACATCGAGTACAGGGTCCGCGAGTACATGAAGATGATACAACAGCAAAGAGAGCTTATGCGAAATGGCTCTGAATCCCCTCCCAACAACGGTCCAGCACCGATCATGTCGCCACGTGACGCAGCTGCCCTCAGTGCCATCGACGTGTCCCGCCTCACTCTCTGGTCGTTgtataacaacaataacaacaacagcCCACAGCCAGACCTTGAACCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCGAACTCGCTGACGAGCGGGGGCAAGCGCGAGGCGTGCCGgtcgcccgcgccgcccgccaaGCGGCGCACGCCGCGGCCGGCGTCCcgccccgcctcgccgcgcTCCGACCTGCACTCGCCGCCCGCGCACCGCCACGCGCATGCGCGCCGCGACGACTCCTCGGCCTCACCGCCTCAGGTCAACGGCGTGCCCACTACTAATGGTGTCAACGGGGCTGCTTTCAAGATCACTACCAGAGGTGACGCGAACTCAGGAGACCACCAACTTGTCGTTTCGATAGAGCTGAACGGAGTGACGTACGAAGGCGTTCTCTTCCCGTCAGGGAACGGTCAAAACGGACACAGACAAATGGTGTCTTAA
- Protein Sequence
- MGGRAGLAAAAHWPAAGLSGSKGLDTALDKREASNVDSIDYRPCRRAPATATSAGRTHAPPAFTALDTLMTRAASLISLCTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLGQHDIEYRVREYMKMIQQQRELMRNGSESPPNNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTSGGKREACRSPAPPAKRRTPRPASRPASPRSDLHSPPAHRHAHARRDDSSASPPQVNGVPTTNGVNGAAFKITTRGDANSGDHQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -