Basic Information

Insect: Sphinx pinastri
Gene Symbol: -
Assembly: GCA_947568825.1
Location: OX387641.1:2587756-2590074[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.0021 4.3 8.1 0.3 18 43 8 30 4 31 0.91

2 21 3.1 6.2e+03 -2.0 0.1 19 43 37 58 36 59 0.65

3 21 0.00015 0.29 11.8 0.0 18 43 67 89 64 90 0.95

4 21 2.6e-05 0.052 14.2 1.6 17 44 97 121 95 121 0.93

5 21 0.12 2.3e+02 2.5 0.1 18 43 128 150 125 151 0.86

6 21 0.00056 1.1 9.9 1.9 16 43 156 180 152 181 0.89

7 21 2.1e-05 0.041 14.5 0.9 17 44 186 210 182 210 0.90

8 21 0.00045 0.91 10.2 0.0 14 43 214 240 211 241 0.80

9 21 0.78 1.6e+03 -0.1 0.1 34 44 263 273 242 273 0.71

10 21 0.34 6.7e+02 1.0 0.5 12 43 293 321 279 322 0.82

11 21 3.3 6.6e+03 -2.1 0.3 18 31 329 341 328 346 0.74

12 21 0.33 6.5e+02 1.1 0.0 15 27 355 367 351 381 0.80

13 21 0.14 2.7e+02 2.3 3.0 16 43 401 425 393 426 0.82

14 21 0.08 1.6e+02 3.0 8.4 4 29 418 443 416 455 0.78

15 21 0.0054 11 6.8 3.0 6 43 449 483 445 484 0.82

16 21 0.036 73 4.1 0.8 17 44 489 513 485 513 0.85

17 21 0.23 4.6e+02 1.6 0.7 18 28 520 530 515 542 0.83

18 21 2.4 4.8e+03 -1.7 0.0 35 43 564 572 550 573 0.71

19 21 9.1 1.8e+04 -3.5 0.1 16 29 578 591 574 594 0.78

20 21 4.8e-05 0.096 13.3 2.0 18 43 616 638 601 639 0.79

21 21 1 2.1e+03 -0.5 0.1 16 40 657 683 651 685 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.0021	4.3	8.1	0.3	18	43	8	30	4	31	0.91
2	21	3.1	6.2e+03	-2.0	0.1	19	43	37	58	36	59	0.65
3	21	0.00015	0.29	11.8	0.0	18	43	67	89	64	90	0.95
4	21	2.6e-05	0.052	14.2	1.6	17	44	97	121	95	121	0.93
5	21	0.12	2.3e+02	2.5	0.1	18	43	128	150	125	151	0.86
6	21	0.00056	1.1	9.9	1.9	16	43	156	180	152	181	0.89
7	21	2.1e-05	0.041	14.5	0.9	17	44	186	210	182	210	0.90
8	21	0.00045	0.91	10.2	0.0	14	43	214	240	211	241	0.80
9	21	0.78	1.6e+03	-0.1	0.1	34	44	263	273	242	273	0.71
10	21	0.34	6.7e+02	1.0	0.5	12	43	293	321	279	322	0.82
11	21	3.3	6.6e+03	-2.1	0.3	18	31	329	341	328	346	0.74
12	21	0.33	6.5e+02	1.1	0.0	15	27	355	367	351	381	0.80
13	21	0.14	2.7e+02	2.3	3.0	16	43	401	425	393	426	0.82
14	21	0.08	1.6e+02	3.0	8.4	4	29	418	443	416	455	0.78
15	21	0.0054	11	6.8	3.0	6	43	449	483	445	484	0.82
16	21	0.036	73	4.1	0.8	17	44	489	513	485	513	0.85
17	21	0.23	4.6e+02	1.6	0.7	18	28	520	530	515	542	0.83
18	21	2.4	4.8e+03	-1.7	0.0	35	43	564	572	550	573	0.71
19	21	9.1	1.8e+04	-3.5	0.1	16	29	578	591	574	594	0.78
20	21	4.8e-05	0.096	13.3	2.0	18	43	616	638	601	639	0.79
21	21	1	2.1e+03	-0.5	0.1	16	40	657	683	651	685	0.82

Sequence Information

Coding Sequence: ATGACCTACCCACAAGACTTTGTCTGCGATTACTGCAGCAGGACTTTTACTCGGAAGTACAACCTTCAAATGCATATAGAGAACTGCCATGTCAACTCTTCAAGCTTCTGTGACATTTGTGATAAAAGATTCGGTAGCCCAGCCGGCCTGCAACTCCACCTGTCCCGAGGACATAATAGGTTTGGTCAGCCGTTCCCAGAATGCGATCTCTGTGGACGCATATTTACAAGAAAGCAGAATATCATGTCACACATGGTAACAGTGCATTTACAAGGTGTCGGACCAGAAATTCGGTGTAATTTGTGTAAGAAAACCTTTACAACGGAACGGAATTTGAAGAGACATTTGAATCAATTGCATAACCCTGATGTGCAGTATCCAACTTGCGATGACTGTCATAAAGTTTTCAGAGGGAAGCAGTCTCTCATAGCTCATATACAAGCTCTGCATAACTCTGGAAGAGGTCAAATAAGCTGCCATTTATGTAATAAGGTTTACACTAATAATAGAAATCTTAAAAGACACGTAGAGATGTTTCATGGTGAAAAGGGAGAGTATAGATGTGATATATGCCCCAAAATATACACATCTAATCAGAGTTTGAGAAGGCATTTACGTACAAGACATAATTCTGATGATCAAGAGTCTGTTAGGTGCGGTTATTGTAGTAAAATTATTTACGGGAAGGATAATTTGGACAGTCATGTACAATTATATCACTCTCAAGATGACGAGAAAATTAACTACTCTTGTGAAAGGTGTAACAAAATGTTTGATGAAGAAGTGATGTTACGAAGGCATGTGAAAAGTGATCATTCGTTTAAGTCCTTCTATAGATATTGCAAGCAATCTTTGATACGACAAATGTCCGAATCTCGGAAGAAGTCTTTGTACAATTGTGAATTTTGCTCAAATTCTTTCGCAAGTGTGTATGAGTTGAAAGATCACATGAGAGGAAGTCATGACAAAGAGTACATTTTATCTACATGCAATGTCTGTTTTGAAAAATTTTACAGCAAAGAAACTATGACGCTCCATAAGAAAGTCTGCCTACCACCTCCCAATGTGAACAGCTGTAGTCATTGCGATAAATTGTTTACTGACATCTCCAGTTTGGAATTTCATACTCGTATCTTCCATCCACAATCTCAGATAGCTGACTCGAACATAACATCAACAGCAGACGACACAGATGTCGGGTATTTCAGATGTAGTCATTGTGACAGGGTTTACTACAGTGAAAGGTCATTAAAACATCATGTAAAGCTGAAACATACAACAGATGTTGCTGTAGAGTGTCAGTATTGTGGAAAAATTTGCAGTAATAAATATTATCTAGCTTCTCATGTGAAAATTGTTCACAGTAATGATTCCTGGTCTAAATGCGATTATTGTGAGAAATTATTTAAATCTAAAAGGAATATACGCAGGCATATCGAGTATACACATTTGGGAATGCAAAGATATAAATGCATTGAATGTGAAACATTGTTTAAAGAAAAGAGGAGTTTGAGAAAGCATGTAAGGACAAAGCATCCAAATTCTGCATCGTTTCCACAATGCCATATATGCCACAAAAGATTTGAATCGGCAAAATCTTGTAAGATACATTTGAAGTTACTCCATTCGTTCAATATGAATACTTTTCCATGTGACTTGTGTCCTGTATCATTCAGTTCTAAGGAGGCTTTGGATATACATTTACAAACTAAACACTTAGCTGAAGATGAGATTTATAAATGTGAAGAATGTAATTTAGTTTTCAAGGGACATGAGAAATTTGAACAGCATAATGAAGTTTGTCACGTGAGCCTCTTTCCTAATATAAAGCAGAAGGTGCTTCCCCGCTGCATTATTTGCATGAAAGATTTTAGTACCAGAAAAACTTTGAAGAGACATATCAAGAAGTTCCACGACGGTTTTGACGTCGACGAATTAGCAACATTCGGTTCCAAACGTCGAGTATTTACAATAGATTGTGAGGAGTGCGTTAGAAACTTCAGCGATGAGTTTCATTTAACTGTATACAATAAGTTAAAACATTTAAGAGATTCTATAATATTTAAATGTGAGGAATGTAAAGTGTCGTATAATTCGCTAGAATATTCTATCCAGAGATATAAGCTTTTTAATATGGATGCATGTAAAAGTAAGATGGTATTGAGTGAGTTATGTACGACGGAAATGAGTGATGATGAAGCTGCGTATTCTGGTTTTGGGTCTCTGCATGAGTTGGTGGAACCAGAGAGCACTACAGTGGATATTAAATGCGAATTAATAGAGGAATGTGATATCAAGACTGAACCTATGTCGCCTTGA
Protein Sequence: MTYPQDFVCDYCSRTFTRKYNLQMHIENCHVNSSSFCDICDKRFGSPAGLQLHLSRGHNRFGQPFPECDLCGRIFTRKQNIMSHMVTVHLQGVGPEIRCNLCKKTFTTERNLKRHLNQLHNPDVQYPTCDDCHKVFRGKQSLIAHIQALHNSGRGQISCHLCNKVYTNNRNLKRHVEMFHGEKGEYRCDICPKIYTSNQSLRRHLRTRHNSDDQESVRCGYCSKIIYGKDNLDSHVQLYHSQDDEKINYSCERCNKMFDEEVMLRRHVKSDHSFKSFYRYCKQSLIRQMSESRKKSLYNCEFCSNSFASVYELKDHMRGSHDKEYILSTCNVCFEKFYSKETMTLHKKVCLPPPNVNSCSHCDKLFTDISSLEFHTRIFHPQSQIADSNITSTADDTDVGYFRCSHCDRVYYSERSLKHHVKLKHTTDVAVECQYCGKICSNKYYLASHVKIVHSNDSWSKCDYCEKLFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSASFPQCHICHKRFESAKSCKIHLKLLHSFNMNTFPCDLCPVSFSSKEALDIHLQTKHLAEDEIYKCEECNLVFKGHEKFEQHNEVCHVSLFPNIKQKVLPRCIICMKDFSTRKTLKRHIKKFHDGFDVDELATFGSKRRVFTIDCEECVRNFSDEFHLTVYNKLKHLRDSIIFKCEECKVSYNSLEYSIQRYKLFNMDACKSKMVLSELCTTEMSDDEAAYSGFGSLHELVEPESTTVDIKCELIEECDIKTEPMSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00858779;
90% Identity: iTF_01359066;
80% Identity: iTF_01359066;