Spin023305.1
Basic Information
- Insect
- Sphinx pinastri
- Gene Symbol
- -
- Assembly
- GCA_947568825.1
- Location
- OX387629.1:9328912-9330975[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-13 8.3e-10 38.8 0.1 2 39 16 53 15 55 0.96
Sequence Information
- Coding Sequence
- atggtacgaatttataatcgtaaaacagatcgcggaacatgggaagaagacgatatgagaagagcggttcgagctgtgctttctgagacaatgggatttctgcgagcctcagctgcctataacgttcctaaatcgaccttggaacgacgagtaagaaaggcccgatgtgccgaagatgctgacactgattcagataatgattatgggaaaaagaaattaggacgcttcaaaacagtttttaataaagaacaggaaaaagaattatctcagtacattaaatcaatggaagcccgccttttcggaataactggcaaagagcttcgaattttagctttccagttagctgaaagaaaccatattaagaacccattcaacgcagagactgggatggcaggagaagactggctcagtggatttctaaaaaggcaccctgaactttcatatagaccaccagagccaacttctgctgcgagggctatggcttttaacaaagtggcagtgaatgagtttttcacattgttggaaagtgttgtagacgagcacggccttacttctgacagaatttttaacgtcgatgaaaccggcgttagtactgtgccaaaaagtcagtcaaagatattgtcactcaagggtcaaaagcaagttggctgcttgtcatcggcagaaagaggacatttagttacggctgaaatctgttttaacgccgctggaacttatataccaccaatgctgatttacgctcgaaaacgaatgaagaaagagttactggatgatgcaccatcgggattttgggggacctgtagtgacaatgggtggataacttcacaaatattctatgattggttcaaaaagtttgtagaaaccgtaaaacccactaaagaaaaacaagtcttgttgctactggatggtcatgcatcacacacaaaaaatattgatttgattgattacgcaagggagcatcatgtaatactgttgtgtacaccaccccattgtacccataaattacaaccattggacgtcgcatttatgagaccgctgagtacatactatggcgcagaagtaaaaaagtggctcagagaccaccctggacgCGTCGTTTCACCCTACCAAGTGGCAAAGCTATTTGGGCAAGCATATTTGCAAGCGGCGACGATGCTTACAGCTATAAACGGCTTTAGGAAATGCGGAATATGGCCACTTGACAGAAATGTATTCAAAGACGCAGACTTTATAGCAGCTGAAACAACGAACACCGAGACTTTGCCATCTGAAAATTTTAATCTTGAATCAACTCGTTTAGAGGAAACCCAACAAATATCGTCCACACCAGCTCATAATGAGATCGCCCGTGAACCTATATCTGCTGGAACATCAATCATCGAATCTTTACCGCCTGAAAATCTAAATATACAATCGACATTTCAGTCTACACTTTCAACGCCAGCTATATCGGAAGTTACTCATGATGAACCATCCATTCCGGCACAAAAATACATTTCTGCTTATCCTGCAGCTGCAGCACCAATGAACACTGAGTTTTTACCTTCAACTTCTGCTCACTTCATTAAAGAGAAGACCCCTAAGAGACAAATGAAGGCAGCAAAGTCTTCGTTTTCCGTGACCCCAGAAAATATCATAGCCATACCCAAGGAAGTAAGAACCCAAGAGAGAAAAACGAGAAAACGCGGTAAAACCGCAATACTTACAGCTTCTCCGTACAAGAATGATCTCATTAGAGATATAAATAAAAAACAAAAAATAAGTAAGATGACTGACAAAAAGAAACCTGACAacaaaaagattgaaaagaaaagatctgaaaaaaagaagccggataaaaagaataaaaacaaaagacgcaaaaaagaaagtgacaaggattctagttcagatgcagacgatgaaaatgattgtccttgcatatattgtgggtatttatattcacaatccactgaaggttgggttatttgtagcgtgtgccatggctgggcccataattcctgcgcaggtgtagacgatgacgatgaggaggcacatatatgtgaacgttgccaaccagattaa
- Protein Sequence
- MVRIYNRKTDRGTWEEDDMRRAVRAVLSETMGFLRASAAYNVPKSTLERRVRKARCAEDADTDSDNDYGKKKLGRFKTVFNKEQEKELSQYIKSMEARLFGITGKELRILAFQLAERNHIKNPFNAETGMAGEDWLSGFLKRHPELSYRPPEPTSAARAMAFNKVAVNEFFTLLESVVDEHGLTSDRIFNVDETGVSTVPKSQSKILSLKGQKQVGCLSSAERGHLVTAEICFNAAGTYIPPMLIYARKRMKKELLDDAPSGFWGTCSDNGWITSQIFYDWFKKFVETVKPTKEKQVLLLLDGHASHTKNIDLIDYAREHHVILLCTPPHCTHKLQPLDVAFMRPLSTYYGAEVKKWLRDHPGRVVSPYQVAKLFGQAYLQAATMLTAINGFRKCGIWPLDRNVFKDADFIAAETTNTETLPSENFNLESTRLEETQQISSTPAHNEIAREPISAGTSIIESLPPENLNIQSTFQSTLSTPAISEVTHDEPSIPAQKYISAYPAAAAPMNTEFLPSTSAHFIKEKTPKRQMKAAKSSFSVTPENIIAIPKEVRTQERKTRKRGKTAILTASPYKNDLIRDINKKQKISKMTDKKKPDNKKIEKKRSEKKKPDKKNKNKRRKKESDKDSSSDADDENDCPCIYCGYLYSQSTEGWVICSVCHGWAHNSCAGVDDDDEEAHICERCQPD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01182625; iTF_01182626; iTF_01182627; iTF_01182628; iTF_01182629; iTF_01182630; iTF_01182631; iTF_01182632; iTF_01182633; iTF_01182605; iTF_01182606; iTF_01182607; iTF_01182608; iTF_01182609; iTF_01182610; iTF_01182611; iTF_01182612; iTF_01182613; iTF_01182614; iTF_01182615; iTF_01182616; iTF_01182617; iTF_01182618; iTF_01182619; iTF_01182620; iTF_01182621; iTF_01182622; iTF_01182623; iTF_01182624; iTF_00000243; iTF_00071314; iTF_00835475; iTF_00835480; iTF_00835481; iTF_00835482; iTF_00835483; iTF_00835484; iTF_00835485; iTF_00835486; iTF_00835487; iTF_00836467; iTF_01526964; iTF_01526965; iTF_01526966; iTF_01526967; iTF_01526968; iTF_01526969; iTF_01526970; iTF_01526971; iTF_00354007; iTF_00352980; iTF_00448951; iTF_00448952; iTF_00822840; iTF_00149305; iTF_00661209; iTF_00661208;
- 90% Identity
- -
- 80% Identity
- -