Ealt007518.1
Basic Information
- Insect
- Epirrhoe alternata
- Gene Symbol
- -
- Assembly
- GCA_963565295.1
- Location
- OY751382.1:7130483-7132585[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-12 4e-09 36.6 0.1 2 39 16 53 15 55 0.95
Sequence Information
- Coding Sequence
- ATGGTCCGAAATTATAAACGTAAAACAGATCGTGGGACATGGCAGGAAGACGATATGAGAAGAGCGGTTAGAGCTGTGATTGCTGAGACAATGGGATTTCTACGGGCCTCAACTACATATAACGTGCCTAAATCGACTTTGGAACGACGAGTGAGAAAAGCTCGATGTATTGATGATGCTGATACTGATTCAGATAATGACTACGGCAAACATAAATTAGGACGCTACAAAACAGTTTTTAATAAAGAACAAGAAGGAGAATTATCTCAGTACATTCAATCAATGGAAGCGCGCCTTTTCGGAATAACTGGCAAAGAGCTTCGGATTTTAGCTTTCCAGTTAGCTAAGAGAAACCATATTGAGAACCCCTACAACCCAGAGACTGGAATGGCTGGAGAAGACTGGCTCTGTGGATTTCTGAAAAGGCATCCTGAACTTTCATTTCGACGTCCAGAGCCAACTTCTGCTGCAAGGGCTATGGCTTTTAACAAAGTGGCAGTAAATGAGTTTTTCACATTGGTGGAAAGTGTTGTAGAAGAGCACGGCCTTACACCTGATAGAATTTATAATGTTGACGAAACCGGTGTTAGTACTGTACCAAAAAGTAACTCAAAGATATTGTCACTCAAGGGTCAAAAGCAAGTTGGCTGCTTGTCATCTGCAGAAAGAGGGCAATTAGTTACGGCTGAAATCTGCTTTAATGCCGCTGGAACTTATATACCACCAATGCTGATCTACGCCCGAAAACGAATGAAGAATGAGTTGCTGGATGATGCACCACCGGGATTTTGGGGGACCTGCAGTGACAATGGGTGGATAACTTCAGAGATATTCTATGATTGGTTCAAAAAGTTTGTAGAAGCCGTAAAACCCACTAAAGAAAAGCCAGTCTTGTTGTTACTGGACGGTCATGCGTCAcacacaaaaaatatcgatttgATTGACTACGCAAGGGAGCATCATGTTATACTGTTGTGTACACCACCTCATTGCACACATAAACTACAACCCTTGGACGTCTCATTTATGAGACCGCTGAGCACATACTATGGTGCTGAAGTAAAAAAGTGGCTAAGAGACCACCCTGGACGCGTAGTTTCACCCTACCAAGTGGCAAAACTATTTGGGCAAGCATATTTACAAGCAGCGACGATGCTGACAGCTATAAACGGGTTTAGAAAATGTGGAATATGGCCACTTGACAGAAACGTATTCACAGATGCAGATTTCATAGCGGCTGAAACAACCAACACCGAGACTTTGCCATCTGAAAATTTAAATCTAGACTCATCTCAGAACACAACAACTTCAACGTCAGCTCCTTTCGAGGCAAGCCAACAAATATCGTCCAATCCAGCACATAATGAAATTCCCCATGAAGCTTCATGTGCTGAAACATCAATAATCGAGTCTCTACCATCTGAAAATCAGCCCACATGTTCAACGCCAGCTACATCGAAAGTAACCCAAGATGAACCTTCCATTCCAGTACAAAAAGATATTTCTGCTGATCCTACAGCTGCAGAACTAATGAACATCGAGTTTTTGACTCAGCCTTCGACTTCTACACACTTCATGAAAGAAAAGACTCCTGAGAGACAAATACAGCTAACGAAATCCTCGTTTGCCGTAACCCCAGATAATATCGTAGCTATACCCAAAGAAGTAAGAACCGAACAGAGAAAAACAAGAAAACGCGGTAAAACTGCAATTCTTACAGCTTCTCCGTACAAGAACGATCTCATTAAAGATAtagataaaaaacaaaaaacaaataagaCGACTGATAAAAAGAAACCTGATAATAAAAAGACTGACAAAAAGACTAATAACAAAAAGACTGAAAAGAAAAGACCTGAAAAAAAGAAGCCggaaaaaaagaataaaaacaaaaggcgCAATAAAGGAGGTGACACAGATACTAGTTCATCTGAAGAAGATGAAAATGATTGTCCTTGCATATATTGTGGGTACCTATATTCACAGTCCACTGAAGGATGGGTTATTTGTACTGTGTGCCATGGCTGGGCCCATAACTCCTGTGCAGGTGTAGACGAAGATGATGAAGAGGCACTTATATGTGAACGTTGTCAACCGGATTAA
- Protein Sequence
- MVRNYKRKTDRGTWQEDDMRRAVRAVIAETMGFLRASTTYNVPKSTLERRVRKARCIDDADTDSDNDYGKHKLGRYKTVFNKEQEGELSQYIQSMEARLFGITGKELRILAFQLAKRNHIENPYNPETGMAGEDWLCGFLKRHPELSFRRPEPTSAARAMAFNKVAVNEFFTLVESVVEEHGLTPDRIYNVDETGVSTVPKSNSKILSLKGQKQVGCLSSAERGQLVTAEICFNAAGTYIPPMLIYARKRMKNELLDDAPPGFWGTCSDNGWITSEIFYDWFKKFVEAVKPTKEKPVLLLLDGHASHTKNIDLIDYAREHHVILLCTPPHCTHKLQPLDVSFMRPLSTYYGAEVKKWLRDHPGRVVSPYQVAKLFGQAYLQAATMLTAINGFRKCGIWPLDRNVFTDADFIAAETTNTETLPSENLNLDSSQNTTTSTSAPFEASQQISSNPAHNEIPHEASCAETSIIESLPSENQPTCSTPATSKVTQDEPSIPVQKDISADPTAAELMNIEFLTQPSTSTHFMKEKTPERQIQLTKSSFAVTPDNIVAIPKEVRTEQRKTRKRGKTAILTASPYKNDLIKDIDKKQKTNKTTDKKKPDNKKTDKKTNNKKTEKKRPEKKKPEKKNKNKRRNKGGDTDTSSSEEDENDCPCIYCGYLYSQSTEGWVICTVCHGWAHNSCAGVDEDDEEALICERCQPD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01358811;
- 90% Identity
- iTF_00661209;
- 80% Identity
- -