Basic Information

Insect: Sphaerophoria taeniata
Gene Symbol: -
Assembly: GCA_943591125.1
Location: CALSBT010000273.1:1028970-1033940[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0065 0.75 11.6 0.1 2 23 187 208 186 208 0.97

2 17 0.011 1.3 10.8 4.9 1 23 214 237 214 237 0.89

3 17 0.0083 0.95 11.2 0.1 3 23 242 263 240 263 0.94

4 17 0.062 7.2 8.5 0.2 2 20 272 290 271 292 0.92

5 17 6.7e-05 0.0077 17.8 2.2 1 23 300 322 300 322 0.98

6 17 0.0035 0.4 12.4 2.0 1 23 328 350 328 350 0.97

7 17 0.00028 0.033 15.8 2.5 1 23 356 378 356 378 0.95

8 17 8.1 9.4e+02 1.8 5.5 3 22 386 405 384 405 0.92

9 17 0.23 27 6.7 2.4 1 23 692 715 692 715 0.98

10 17 0.43 49 5.8 2.2 1 23 739 761 739 761 0.94

11 17 0.014 1.6 10.5 0.9 1 23 769 793 769 793 0.95

12 17 9.3e-05 0.011 17.4 0.8 1 23 797 819 797 819 0.98

13 17 0.0013 0.15 13.7 0.3 2 22 831 851 830 851 0.93

14 17 0.00012 0.014 17.0 0.4 1 23 859 881 859 881 0.97

15 17 1.4e-05 0.0016 20.0 1.6 1 23 887 910 887 910 0.97

16 17 6.3e-05 0.0073 17.9 0.2 1 23 916 938 916 938 0.98

17 17 0.0034 0.39 12.4 1.6 1 21 944 964 944 965 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0065	0.75	11.6	0.1	2	23	187	208	186	208	0.97
2	17	0.011	1.3	10.8	4.9	1	23	214	237	214	237	0.89
3	17	0.0083	0.95	11.2	0.1	3	23	242	263	240	263	0.94
4	17	0.062	7.2	8.5	0.2	2	20	272	290	271	292	0.92
5	17	6.7e-05	0.0077	17.8	2.2	1	23	300	322	300	322	0.98
6	17	0.0035	0.4	12.4	2.0	1	23	328	350	328	350	0.97
7	17	0.00028	0.033	15.8	2.5	1	23	356	378	356	378	0.95
8	17	8.1	9.4e+02	1.8	5.5	3	22	386	405	384	405	0.92
9	17	0.23	27	6.7	2.4	1	23	692	715	692	715	0.98
10	17	0.43	49	5.8	2.2	1	23	739	761	739	761	0.94
11	17	0.014	1.6	10.5	0.9	1	23	769	793	769	793	0.95
12	17	9.3e-05	0.011	17.4	0.8	1	23	797	819	797	819	0.98
13	17	0.0013	0.15	13.7	0.3	2	22	831	851	830	851	0.93
14	17	0.00012	0.014	17.0	0.4	1	23	859	881	859	881	0.97
15	17	1.4e-05	0.0016	20.0	1.6	1	23	887	910	887	910	0.97
16	17	6.3e-05	0.0073	17.9	0.2	1	23	916	938	916	938	0.98
17	17	0.0034	0.39	12.4	1.6	1	21	944	964	944	965	0.95

Sequence Information

Coding Sequence: ATGCCACAATGTCAGGAAATGATCGCCTTTTCAAGTGACTTAAAAGTCAGCGCCAATTTCAAGAATCTCAATCTCTCCCTGGTCACAATCCCTTCCAATCGAATTGACTACACTGCGATCCGCAAACATCCCTATTTCGAGAGGACATGGCTAAGAAGTTCAGTGAACCACCGAAGAGCGTCGGCGATATACCTACTCGAGAAGCAGTACGAAAAATTGGAGGACAAGTTGGCCGCTGCCCATGAGCAGATGATTGTCGAACGTCAGTCGGCACGAAAGGCAAACTTAAACCTGTGGAAAGTGGAGAAGCAATTGAAGCACAAAATGTGGGTCGTCGAACAAATTTCACATGCTCATCGTTTGGAGAACAAGAAACTCCTTCGTGAACTAAACGAAGAGCGGGAAAAGTCCTCAACCATCGATGCGGCTTCAGCTATCGAAATCAAGCTCAAAAACCTCGAAGACAACTACGAAAACGACTCAACTTCCAGCATCGGCGGCAGCGTCACCTCCACAATGATGGTCCAAATAACAACCGACAAAACAGGTCCGAAATTAGTCTGTCCCGTTTGCAATAAAGCTCTCATATCACTCAATGGCTACGTGAAGCACTTGAAGAAACACGAACCGCCCGGTGGCTATCTCTGCAACTACTGCGATGAGCGCTTCTGCCTCGAAGACCATCTCAAAAAACACAAAGATGAAAAACACAAAATCCTAGCATGTCAGATATGCCTTCAAACGTTCGAATCCCCACAAGACTATCGTACTCACATCAAAGACGTCCATCAAGGTGTGGACAGACGCATGATTAAGTGTGAAAAATGTAGCATGGAATTCAAAACGGCTCAAGCCGCCAAACGCCACACCGACACTCAATGTGGCCAAATAAAGGCACACAAATGTGATCAGTGTGACATGGCTTTTTATACGAAGTACAATTTAGCCGAACATAAGAAGATCCATTCGGGGGAGAAGAAATTCTGCTGCAGTTATTGTGGAAAGAGCTTCTTGAGCAACGGACGATTGGTAATACACGAGAGGAGTCACACCGGGGAGAAGCCGTACAAGTGTGATATCTGCGGGAAATGCTTTGCTCATCGCGAAAGCATCGTTACTCATTCCTCGATTCACACCGGAGTCAAGCTTGTTGTATGCAAGTGCTGTGGCTCAAGATTCTCCTGCCATTCGAATCTCATCAAACACAGACGAACACGACCCGACACATGTGGCCTGCCAATCTATAACGCTACCAAGGAAACAAAGCGAAATGGAAGTTCAAGGATTCCTCCTGGTTTAATGACTTCGGAGATCAAAATTGTTCAAGCGAGTAAAGTTATTAAGCCCAGCGAAGAGCAAAAGAAACCCACCAAGATTACCAGTTCCAGTGAGGAGTGTCAGAAGAAGCCAAAAGCCCCCAAGCGACGAGCAAAGCGTAAGAAACAAGACACCGAGTCGGAAGATAACGACGACGAAAACGATGACAAAGAAGAAATTATAATTGTTCGCGCAAGACGGAGTCTTCGCACAAAAGAGCCCAACACTGATGTTGAACCTCGCCCAGAATCACCTTCTAAAGACTTTGATTCTGACAATTACAGCGACGATCCACTTTTTGAAAGTCCAATGCACTCGGTTGATTCATCGGACAGTGAAAAACCATTGGTGAAGCGAGAACCTTTGGAAAAAGTTAACGTCCCTATAGGACCTATTGACCCCCAGCCGCCAGTGAAGGAGGAAGAGGAAATGGAGAATTTCTTCAAAGAACAGGATCAAATTCTTGATAAATTTCTGTCCGAATCGGCACTCGAGGTGAAATTTGAACCCCTTGTTGAGATAAAAGAAGAAACAGAAGTTAAGAAGGAAGACTCAAAAGTCCCTGAAATTCATCCCGGAGATGAAAAAAGCAAAAAAGAAAAAACACCACCTAAGCGGGCTAGTAAAAGGAACACAGCTGCTGTTGTGGCCAGCGAAAAAGATAACGATTCGGAAGATGTAGAAAAAGAGCCGCGAAAGCGACGCTCGCGTGGGGCGCTGCGCAAGAAGCTTCGCATATTCAAGAAGGAAAGAGTATACGAGTGTAAATTCTGCGCCAAAGTCTACCACATCAAGAAACCATATGAAAAACACCTCCAGACGTTGCACAAACAGACTGAAGAGGAGCTGCGGGAATTGTTCAAGGATGAGGACAATGATATTCCCGATGAGTACGTCCATCGCTGTCCGATTTGCTCGAAGATCTATCTGATGGCTAAGCGACTGAAGACTCATATGACCTTTCATGGCCCCGATGGAAGTCTCATCCACAAATGCCCCGGCTATTGCAATTTGTATTTTGCAACGAAAGACGAAGCCACACAACACGCCAGAGACAAGCATAAGAAAAATTTCTACTGCGAAATCTGCGACAAATATTCGCAATCACCAGATTCTCTTAAAATCCATAGAAGAACCCATGTCGAACAGAAGCGGCAAATCAATCGCAATTTAATTTGCGACAAGTGCGCTAAATCCTTTGCCAGCCGAACATCACTCAACGATCATACCAGATCGAATTGCGGCAAGGATTTCCTCTATCGTTGTGATATTTGTGATAAGAGATTCAGCACAGCTGGGATCTTGAAGACACACACGCTATTGCATAAGGACGAGACGCCATATGCATGTGACAAGTGCGGAAAGACATTTAAAATTAAGGCCCAGTATAAGACGCATATTAAAATGAAGCACACTGATAATAAGCCTTTTAAGTGTGAGCTCTGTCCCAAAGCATATCCTTATCGGGAGAGTCTCCTAACCCACATGACTGTTCATACGGGACTCAAACGGTATTCGTGCAATGGATGTAGCAAACGATTTACGTGCATTTCGAATTTACAAGCTCATCGCAAGGTTTATGCGGATACTTGTGGATTGCAGCCCCTGAATTCGAAGCCAAGTACTTACTTGGGTGTGCAGAAGGGCATGCTTCTCATGGGAACAAAGCCTTCCTATTAG
Protein Sequence: MPQCQEMIAFSSDLKVSANFKNLNLSLVTIPSNRIDYTAIRKHPYFERTWLRSSVNHRRASAIYLLEKQYEKLEDKLAAAHEQMIVERQSARKANLNLWKVEKQLKHKMWVVEQISHAHRLENKKLLRELNEEREKSSTIDAASAIEIKLKNLEDNYENDSTSSIGGSVTSTMMVQITTDKTGPKLVCPVCNKALISLNGYVKHLKKHEPPGGYLCNYCDERFCLEDHLKKHKDEKHKILACQICLQTFESPQDYRTHIKDVHQGVDRRMIKCEKCSMEFKTAQAAKRHTDTQCGQIKAHKCDQCDMAFYTKYNLAEHKKIHSGEKKFCCSYCGKSFLSNGRLVIHERSHTGEKPYKCDICGKCFAHRESIVTHSSIHTGVKLVVCKCCGSRFSCHSNLIKHRRTRPDTCGLPIYNATKETKRNGSSRIPPGLMTSEIKIVQASKVIKPSEEQKKPTKITSSSEECQKKPKAPKRRAKRKKQDTESEDNDDENDDKEEIIIVRARRSLRTKEPNTDVEPRPESPSKDFDSDNYSDDPLFESPMHSVDSSDSEKPLVKREPLEKVNVPIGPIDPQPPVKEEEEMENFFKEQDQILDKFLSESALEVKFEPLVEIKEETEVKKEDSKVPEIHPGDEKSKKEKTPPKRASKRNTAAVVASEKDNDSEDVEKEPRKRRSRGALRKKLRIFKKERVYECKFCAKVYHIKKPYEKHLQTLHKQTEEELRELFKDEDNDIPDEYVHRCPICSKIYLMAKRLKTHMTFHGPDGSLIHKCPGYCNLYFATKDEATQHARDKHKKNFYCEICDKYSQSPDSLKIHRRTHVEQKRQINRNLICDKCAKSFASRTSLNDHTRSNCGKDFLYRCDICDKRFSTAGILKTHTLLHKDETPYACDKCGKTFKIKAQYKTHIKMKHTDNKPFKCELCPKAYPYRESLLTHMTVHTGLKRYSCNGCSKRFTCISNLQAHRKVYADTCGLQPLNSKPSTYLGVQKGMLLMGTKPSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00426562; iTF_00984459;
90% Identity: -
80% Identity: -