Sinv004764.1
Basic Information
- Insect
- Solenopsis invicta
- Gene Symbol
- TFIP11
- Assembly
- GCA_016802725.1
- Location
- NC:233726-243694[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-100 2.6e-96 322.1 15.9 1 275 387 656 387 656 0.98 2 2 0.0024 17 4.5 0.1 245 273 671 699 661 701 0.87
Sequence Information
- Coding Sequence
- ATGTCTGAAGACGAAGTGGAAAGCTTTGAAATCACCGATTATGATTTGGATAATGAATTCAACATAGCTCGTCCTCGACGCAAACTCTCAAAGAAACAACAAATGCTAGgAATCTGGGCAGATGAcagtgatgatgatgatgtgtCTGCCAGACCATCTTTCAAAACTTATAATAAGGGCCCTAAGAATTATACTGCACCAATTAATTTTGTCGCGGGTGGTATTCAGCAAGCAGGAAAAccaaaagagaaagaagagaaagaagatgAAGATGATGAAGAGGAAATGGGAGAACCTCAAACAAAGCATAGTAGCTCAAGTTCAGAAGATGAGGGGCCAAGATCACGACCATCCTTCTCCTTGAATTCAGATAACGATATCGCAGGTTTGCGACAAAAGCACAATCAAGTAAATCCGTTATTGATGAAAGGAGATATAGGTAAATGGCAGAAGCATACTAAAGCCATTGGCCTTAAAATAATGCTACAGtATGGATTTGAGGTTGATAAAGGCTTAGGTAAAGATTTACAAGGAATAAATATGCCGATAGAGGCACAAATCAGAAAAGGAAGAGGCGCAATCGGTGCATACGGTCCAGAAAAGACGCCGAAAGTTCctgagaaaaagaaagatgaCGATACGGATGAAACAAAAGACTCAAAGTCTAAGGTATCTCAATGGCGGAAGGGTAATAATACCAAGAAGAAAATCAGATATTATTATAGAAGTGTAGATGAAGTTTTggaagatggaaaattaaagcCTAATAGAAAAAGAACAGTTCCACTATCTAATGATATGACTAGAGTTAAAGTTATCGACATGACAGGGCCTGATACAAGAATTCTCAGTGGATACCATGCAATTGGTGGTCAGCAATGTCCCGATGAGACCGTAATTACATCCGATAAAAAATCTAAAGTAAACTTTGCCCTACCCCAATTACAGCACAATTTGAATTCACTTGTGGAAATGTGCGAGCAAGACATTATTCAAAATGATCGGCGAATGAGACATTTGAATGATAGAATGATAGCTTTAGAAGCGGAAAAAAGGAATTTGTCCAAAGTTGTGGAGCAACATGGTCAATTAATTGGCACCTTGGAGAATGTGCTCGCGATTGTGGACAGATTGATGAACGAGACAAACGAATTGTCGCTGCAAGAGACTGCGGAGGCTTTCAAAACTTTACAGGATAATTATTATGAAGAATATAAGATGTATGAGCTTGGCGAATTGGCCAGCAGTTTCGTGGCGCCAAAGATAAAAGATTGCCTAGTCAACTGGAATCCATTAATGCAACCAAAACAGCCAATTAAGTTATTTGAACAGTGGAAGGGTATCTTGGAGAATGGAACTAGTTCAACACTCCAGTCACGAACTATGCAGTCGTACGATCAACTAGTATGGGATGCGTGGATGCCGTCTATTAGAGGAGCTATACAACACTGGACATGTAGGCAGCCTGAGCCTTTGATTGAACTAATAGAATCCTGGATGCCATTACTACCTAATTGGatcttagaaaattatatattagacTTATTAATATTACCAAAATTAACATTGGAGGTGGAAGAATGGAATCCTCTTACTGATACTGTACCTATTCACACATGGATTCATCCTTGGTTGCCATTATTACgaaATCGTTTAGATACCTTGATTTATCCAATAATACGTAGAAAACTTGGATCTGCATTAGGAGGTTGGCATCCATCAGACAGATCCGCTAGACTAATGTTGCAGCCTTGGGCAGATGTGTTTGCCAAGGGAGATATGGAAGCGTTCTTAGTCAAGAATATTATTCCGAAATTGCAAATAGCCTTATCCGAGTTTCTTATAAATCCACATCAGCAACACTTGGATCAATGGAATTGGGTGTATGAGTGGAAGGAATTAATCCCCATTCACATCATGGCAGGTTTGcttgataaatttttctttccaaaaTGGCTACAAGCTTTGGCGTTTTGGCTCAATCATTCGCCTAATTATGATCAAGTTACAAGTTGGTACATGGGATGGAAAGGGATGTTAAGTGATAAGTTATTGGCTGAACCATTAATAAAAGAGCACTTCAAGAAAGCATTAGATATGATGAATAGGGCCGTCAATGGGCCACAAACTCATCAACCTGGTGCGCTAGAACAAGTTTCGTACTTAACGAGCTTAGAGAGAACTCAGCCAGCGATGTCACAGATGGCACCGAATGCGCAACCAAGAATGGAAAGACTCGCAGAGGCAGTGCGAACAGCCTCTCAAATTCCACAGGGTTTCAAagattttgtacaaaaaaagtgCGAAGAGAGAGGTATATTATTTATGCCGATTCCAAACAGATACAAAGAGGCCAAGCAGGTGTACAAAATCGGCAATGTTCAGGCGTACATCGACAGCAACGTCTTATTTGTGTGCCATAATGGCACAAATTGGTTACCAACGCATGTAAATGCCTTGCTAGATATGTGTGAACTTTAA
- Protein Sequence
- MSEDEVESFEITDYDLDNEFNIARPRRKLSKKQQMLGIWADDSDDDDVSARPSFKTYNKGPKNYTAPINFVAGGIQQAGKPKEKEEKEDEDDEEEMGEPQTKHSSSSSEDEGPRSRPSFSLNSDNDIAGLRQKHNQVNPLLMKGDIGKWQKHTKAIGLKIMLQYGFEVDKGLGKDLQGINMPIEAQIRKGRGAIGAYGPEKTPKVPEKKKDDDTDETKDSKSKVSQWRKGNNTKKKIRYYYRSVDEVLEDGKLKPNRKRTVPLSNDMTRVKVIDMTGPDTRILSGYHAIGGQQCPDETVITSDKKSKVNFALPQLQHNLNSLVEMCEQDIIQNDRRMRHLNDRMIALEAEKRNLSKVVEQHGQLIGTLENVLAIVDRLMNETNELSLQETAEAFKTLQDNYYEEYKMYELGELASSFVAPKIKDCLVNWNPLMQPKQPIKLFEQWKGILENGTSSTLQSRTMQSYDQLVWDAWMPSIRGAIQHWTCRQPEPLIELIESWMPLLPNWILENYILDLLILPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWADVFAKGDMEAFLVKNIIPKLQIALSEFLINPHQQHLDQWNWVYEWKELIPIHIMAGLLDKFFFPKWLQALAFWLNHSPNYDQVTSWYMGWKGMLSDKLLAEPLIKEHFKKALDMMNRAVNGPQTHQPGALEQVSYLTSLERTQPAMSQMAPNAQPRMERLAEAVRTASQIPQGFKDFVQKKCEERGILFMPIPNRYKEAKQVYKIGNVQAYIDSNVLFVCHNGTNWLPTHVNALLDMCEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00898736;
- 90% Identity
- iTF_01354606;
- 80% Identity
- -