Basic Information

Insect: Solenopsis fugax
Gene Symbol: -
Assembly: GCA_003595255.1
Location: QKQZ01081106.1:630-4632[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 3e-05 0.0046 18.2 1.4 1 23 457 479 457 479 0.96

2 8 1.1e-05 0.0016 19.6 1.9 1 20 485 504 485 507 0.94

3 8 7.5e-06 0.0011 20.1 1.4 1 23 513 535 513 535 0.98

4 8 4.4e-05 0.0066 17.6 4.4 1 21 541 561 541 563 0.95

5 8 5.9e-06 0.00089 20.4 5.6 1 23 569 591 569 591 0.99

6 8 1.3e-05 0.002 19.3 5.3 1 23 597 619 597 619 0.97

7 8 5.1e-05 0.0077 17.4 6.9 1 23 625 647 625 647 0.96

8 8 4.7 7.1e+02 1.8 0.1 1 8 653 660 653 661 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	3e-05	0.0046	18.2	1.4	1	23	457	479	457	479	0.96
2	8	1.1e-05	0.0016	19.6	1.9	1	20	485	504	485	507	0.94
3	8	7.5e-06	0.0011	20.1	1.4	1	23	513	535	513	535	0.98
4	8	4.4e-05	0.0066	17.6	4.4	1	21	541	561	541	563	0.95
5	8	5.9e-06	0.00089	20.4	5.6	1	23	569	591	569	591	0.99
6	8	1.3e-05	0.002	19.3	5.3	1	23	597	619	597	619	0.97
7	8	5.1e-05	0.0077	17.4	6.9	1	23	625	647	625	647	0.96
8	8	4.7	7.1e+02	1.8	0.1	1	8	653	660	653	661	0.87

Sequence Information

Coding Sequence: ATGAATAGTGAGCAGCATGCATTGCCAGCGACTACGCAGGCACAACAAGAGGATGTAAACGCGGGTCAAAGTGGTCGTCCTTCATACCCAGGTGGTTTGGCTACTGCGACCGCGAGTCTTGGCAATGTAGGGAGTACTCCCCATTCATCCGCGGACCTGCGTGTAGGTACTGCCGTAGCGTTAGCCTCCTCGGTAGCCTCCTCGGTAGCTAAGTATTGGGTCCTCACCAATCTGTTTTCTCCCGGACCGCTACCTCAAGTCTCGGTTTACCACCATTCCCACCACAACTCCTCGCATAGGAGTGGTGGCGGTGGGGAGGCATCATCCTCCAAAGAACCAGCCTCTTCACTGAACCAGGAAATGGCGTTGACTTCCAGCTCGCATCATCAGCAACAGTCAACAGCCGCGCATCATCATCATCAGCCTTCAgttagcagcagcagcagccacCACAGTTCCCTGCAGTCGAATCCACAGATTCCTGTGTCTCTTCCCGGCCTTAATTTAGACGGCGCACATATACCAGCGAGTGTTAGTCATCTGGCTGCACATGCACAAATGCAACAAATGCAGGCGCAAGCACAACAGCTGCaccagcagcaacaacagcaaccaccgcagcaacagcagcagcaacagcagtcCCATCATCAGATGCCGAATCATCAGAACGCTCAGAACAATGGTCCAACGGCTCACAGCCAAAACGCTCAGCGAGACGACAACAAGGTCAAGGACGAGGGCGGTAGTTGCACCACCGAGCGTTGCAGCGACAATCAGGTTCACTGTCAAGTTCAATGCGATCTGCAATTACAACCACCCCAAGATCTTCAACAGAGCTTGatgcaacagcagcagcagcaacagcagcagcaacagcagcagatCGGAGTCAACATTAGCGGTAACTCCACCACTGAGGGGGGAAACCAGAATAACTCCGAGAAACCCGAAAAAGAGAAGGAATTGCGACAACTGAATATGACCCAattCCAAGTCCCTGACTTGAAACCAGGAGGACACATGATGGATGTGAGGACAGCAGACGGATCGGTTGTCAAAATCAGCGCAGGAAACGAGCAAGATTTAGCCAAGACCCTTGGCGTCGAAATGGtacaaaatatgtacaagGTTAATGTTGAAGATATTAACCAACTGTTGGCGTATCACGAGGTCTTTGGAAAGCTGCAGAGTGAAATCGCAGCTGGAACGACTCTAGTAGGCAGTACTGTGCCTACACAAACAGTTACCACGATACAAAATGGCACGCCAATCGTGCAACAAGTCCAACTGAACAAATTCGACATAAAGTCGAGCGACGGCGAGGCAACGCCTGGTCCGAGCGCATCGCCCGTGTCGGTTGGCAGCCACGCTTGTGAGATATGCGGAAAGATCTTCCAGTTTCGTTATCAGCTCATTGTACATCGCAGATATCACACCGAGAGGAAACCATTTACGTGTCAGGTATGCGGTAAAGCGTTCTCGAATGCGAACGATCTGACTCGTCACGGCAAGTGTCATCTGGGTGGATCCATGTTCACCTGCACCGTTTGCTTTCACGTCTTTGCAAATGCGCCTTCGCTAGAACGTCATATGAAGAGACATGCTACCGACAAACCGTACAATTGCACAGTCTGTGGTAAGAGTTTTGCGCGTAAAGAGCATTTGGATAACCATACGAGATGTCATACTGGCGAAACGCCGTATAGATGCCAATATTGTTCGAAGACATTTACCCGAAAAGAACACATGGTAAATCACGTTCGCAAACACACTGGTGAGACTCCACATCGATGTGATATTTGCAAGAAGAGCTTTACTCGCAAAGAACACTTTATGAACCATGTTATGTGGCATACAGGAGAAACCCCTCATCATTGTCAAGCTTGCGGCAAGAAGTATACGCGCAAAGAGCATCTCGCTAACCATATGCGCTCGCACACAAACGACACGCCGTTCCGTTGTGAAATATGCGATATAAGTAACGAAGCAAATTACGATGGTTTATGGGACGATTCCAGAAACTTTCTAAAGTGA
Protein Sequence: MNSEQHALPATTQAQQEDVNAGQSGRPSYPGGLATATASLGNVGSTPHSSADLRVGTAVALASSVASSVAKYWVLTNLFSPGPLPQVSVYHHSHHNSSHRSGGGGEASSSKEPASSLNQEMALTSSSHHQQQSTAAHHHHQPSVSSSSSHHSSLQSNPQIPVSLPGLNLDGAHIPASVSHLAAHAQMQQMQAQAQQLHQQQQQQPPQQQQQQQQSHHQMPNHQNAQNNGPTAHSQNAQRDDNKVKDEGGSCTTERCSDNQVHCQVQCDLQLQPPQDLQQSLMQQQQQQQQQQQQQIGVNISGNSTTEGGNQNNSEKPEKEKELRQLNMTQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGSTVPTQTVTTIQNGTPIVQQVQLNKFDIKSSDGEATPGPSASPVSVGSHACEICGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCTVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQACGKKYTRKEHLANHMRSHTNDTPFRCEICDISNEANYDGLWDDSRNFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00765890;
90% Identity: iTF_00868323; iTF_00393764; iTF_01423876; iTF_00885385; iTF_00765890; iTF_01228526; iTF_00264527;
80% Identity: -